Advances and Challenges in CRISPR/Cas-Based Fungal Genome Engineering for Secondary Metabolite Production: A Review DOI Creative Commons
Duoduo Wang,

Shunda Jin,

Qianhui Lu

et al.

Journal of Fungi, Journal Year: 2023, Volume and Issue: 9(3), P. 362 - 362

Published: March 15, 2023

Fungi represent an important source of bioactive secondary metabolites (SMs), which have wide applications in many fields, including medicine, agriculture, human health, and other industries. The genes involved SM biosynthesis are usually clustered adjacent to each into a region known as biosynthetic gene cluster (BGC). recent advent diversity genetic genomic technologies has facilitated the identification cryptic or uncharacterized BGCs their associated SMs. However, there still challenges that hamper broader exploration industrially metabolites. advanced CRISPR/Cas system revolutionized fungal engineering enabled discovery novel compounds. In this review, we firstly introduce relationships with SMs, followed by brief summary conventional strategies for engineering. Next, range state-of-the-art CRISPR/Cas-based tools been developed review these methods fungi research on Finally, limitations systems discussed directions future proposed order expand improve efficiency

Language: Английский

Aflatoxin Biosynthesis, Genetic Regulation, Toxicity, and Control Strategies: A Review DOI Creative Commons
Rahim Khan,

Farinazleen Mohamad Ghazali,

Nor Ainy Mahyudin

et al.

Journal of Fungi, Journal Year: 2021, Volume and Issue: 7(8), P. 606 - 606

Published: July 27, 2021

Aflatoxins (AFs) are highly toxic and cancer-causing compounds, predominantly synthesized by the Aspergillus species. AFs biosynthesis is a lengthy process that requires as minimum 30 genes grouped inside 75 kilobytes (kB) of gene clusters, which regulated specific transcription factors, including aflR, aflS, some general factors. This paper summarizes status research on characterizing structural regulatory associated with AF production their roles in aflatoxigenic fungi, particularly flavus A. parasiticus, enhances current understanding adversely affect humans animals great emphasis toxicity preventive methods.

Language: Английский

Citations

58

Developing fungal heterologous expression platforms to explore and improve the production of natural products from fungal biodiversity DOI Creative Commons
Xiangfeng Meng, Yu Fang,

Mingyang Ding

et al.

Biotechnology Advances, Journal Year: 2021, Volume and Issue: 54, P. 107866 - 107866

Published: Nov. 12, 2021

Natural products from fungi represent an important source of biologically active metabolites notably for therapeutic agent development. Genome sequencing revealed that the number biosynthetic gene clusters (BGCs) in is much larger than expected. Unfortunately, most them are silent or barely expressed under laboratory culture conditions. Moreover, many nature uncultivable cannot be genetically manipulated, restricting extraction and identification bioactive these species. Rapid exploration tremendous cryptic fungal BGCs necessitates development heterologous expression platforms, which will facilitate efficient production natural cell factories. Host selection, BGC assembly methods, promoters used expression, metabolic engineering strategies compartmentalization pathways key aspects consideration to develop such a microbial platform. In present review, we summarize current progress on above challenges promote research effort relevant fields.

Language: Английский

Citations

58

Tackling multidrug-resistant Staphylococcus aureus by natural products and their analogues acting as NorA efflux pump inhibitors DOI
Gautam Kumar,

Asha Kiran Tudu

Bioorganic & Medicinal Chemistry, Journal Year: 2023, Volume and Issue: 80, P. 117187 - 117187

Published: Jan. 28, 2023

Language: Английский

Citations

31

Correlative metabologenomics of 110 fungi reveals metabolite–gene cluster pairs DOI
Lindsay K. Caesar,

Fatma Ayaloglu Butun,

Matthew T. Robey

et al.

Nature Chemical Biology, Journal Year: 2023, Volume and Issue: 19(7), P. 846 - 854

Published: March 6, 2023

Language: Английский

Citations

31

Advances and Challenges in CRISPR/Cas-Based Fungal Genome Engineering for Secondary Metabolite Production: A Review DOI Creative Commons
Duoduo Wang,

Shunda Jin,

Qianhui Lu

et al.

Journal of Fungi, Journal Year: 2023, Volume and Issue: 9(3), P. 362 - 362

Published: March 15, 2023

Fungi represent an important source of bioactive secondary metabolites (SMs), which have wide applications in many fields, including medicine, agriculture, human health, and other industries. The genes involved SM biosynthesis are usually clustered adjacent to each into a region known as biosynthetic gene cluster (BGC). recent advent diversity genetic genomic technologies has facilitated the identification cryptic or uncharacterized BGCs their associated SMs. However, there still challenges that hamper broader exploration industrially metabolites. advanced CRISPR/Cas system revolutionized fungal engineering enabled discovery novel compounds. In this review, we firstly introduce relationships with SMs, followed by brief summary conventional strategies for engineering. Next, range state-of-the-art CRISPR/Cas-based tools been developed review these methods fungi research on Finally, limitations systems discussed directions future proposed order expand improve efficiency

Language: Английский

Citations

31