High-throughput 16S rRNA gene-based amplicon sequencing reveals the functional divergence of halophilic bacterial communities in the Suaeda salsa root compartments on the eastern coast of China DOI

Huifang Jiang,

Charles Obinwanne Okoye, Xunfeng Chen

et al.

The Science of The Total Environment, Journal Year: 2024, Volume and Issue: 942, P. 173775 - 173775

Published: June 5, 2024

Language: Английский

Antimicrobial and antioxidant activities of Streptomyces species from soils of three different cold sites in the Fez-Meknes region Morocco DOI Creative Commons

Said Rammali,

Lahoucine Hilali,

Khadija Dari

et al.

Scientific Reports, Journal Year: 2022, Volume and Issue: 12(1)

Published: Oct. 14, 2022

Abstract The increasing demand for new bioactive compounds to combat the evolution of multi-drug resistance (MDR) requires research on microorganisms in different environments order identify potent molecules. In this study, initial screening regarding antimicrobial activity 44 Actinomycetes isolates isolated from three soil samples extremely cold sites Morocco was carried out. Primary and secondary were performed against Candida albicans ATCC 60,193, Escherichia coli 25,922, Staphylococcus aureus 25,923, Bacillus cereus 14,579, other clinical MDR bacteria, thirteen phytopathogenic fungi. Based results obtained, 11 active selected further study. 11microbial identified based morphological biochemical characters their molecular identification using 16S rRNA sequence homology. UV–visible analysis dichloromethane extracts five Streptomyces sp. Strains that showed high antioxidant (ABTS 35.8% DPPH 25.6%) activities revealed absence polyene GC–MS extract E23-4 as most strain presence 21 volatile including Pyrrolopyrazine (98%) Benzeneacetic acid (90%). conclusion, we studied isolation strains produce with a microbiologically unexplored region Morocco. Furthermore, study has demonstrated significant ( P < 0.0001) positive correlation between total phenolic flavonoid contents capacity, paving way characterization these optimal use anticancer, antioxidant, purposes.

Language: Английский

Citations

43

Expanding the genomic encyclopedia of Actinobacteria with 824 isolate reference genomes DOI Creative Commons
R. Seshadri, Simon Roux, Katharina J. Huber

et al.

Cell Genomics, Journal Year: 2022, Volume and Issue: 2(12), P. 100213 - 100213

Published: Nov. 11, 2022

The phylum Actinobacteria includes important human pathogens like Mycobacterium tuberculosis and Corynebacterium diphtheriae renowned producers of secondary metabolites commercial interest, yet only a small part its diversity is represented by sequenced genomes. Here, we present 824 actinobacterial isolate genomes in the context phylum-wide analysis 6,700 including public isolates metagenome-assembled (MAGs). We estimate that 30%–50% projected phylogenetic possesses genomic representation via MAGs. A comparison gene functions reveals novel determinants host-microbe interaction as well environment-specific adaptations such potential antimicrobial peptides. identify plasmids prophages across uncover extensive prophage structured mainly host taxonomy. Analysis >80,000 biosynthetic clusters horizontal transfer loss shape metabolite repertoire taxa. Our observations illustrate essential role need for high-quality genome sequences.

Language: Английский

Citations

38

Dynamic interplay among soil nutrients, rhizosphere metabolites, and microbes shape drought and heat stress responses in summer maize DOI

Ao Yuan,

Saini Dinesh Kumar,

Haotian Wang

et al.

Soil Biology and Biochemistry, Journal Year: 2024, Volume and Issue: 191, P. 109357 - 109357

Published: Feb. 11, 2024

Language: Английский

Citations

14

Soil pH and carbon quality index regulate the biogeochemical cycle couplings of carbon, nitrogen and phosphorus in the profiles of Isohumosols DOI

Zhuxiu Liu,

Haidong Gu,

Yao Qin

et al.

The Science of The Total Environment, Journal Year: 2024, Volume and Issue: 922, P. 171269 - 171269

Published: Feb. 27, 2024

Language: Английский

Citations

11

High-throughput 16S rRNA gene-based amplicon sequencing reveals the functional divergence of halophilic bacterial communities in the Suaeda salsa root compartments on the eastern coast of China DOI

Huifang Jiang,

Charles Obinwanne Okoye, Xunfeng Chen

et al.

The Science of The Total Environment, Journal Year: 2024, Volume and Issue: 942, P. 173775 - 173775

Published: June 5, 2024

Language: Английский

Citations

11