bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2022,
Volume and Issue:
unknown
Published: Dec. 1, 2022
Abstract
Breathing
is
vital
and
must
be
concurrently
robust
flexible.
This
rhythmic
behavior
generated
maintained
within
a
rostro-caudally
aligned
set
of
medullary
nuclei
called
the
Ventral
Respiratory
Column
(VRC).
The
properties
individual
VRC
are
well
known,
yet
technical
challenges
have
limited
interrogation
entire
population
simultaneously.
Here,
we
characterize
over
13,000
units
using
high-density
electrophysiology,
opto-tagging,
histological
reconstruction.
Population
dynamics
analysis
reveals
interactions
between
inspiratory
expiratory
dynamical
states
give
rise
to
low-dimensional,
elliptical
neural
manifold.
structure
this
manifold
even
during
opioid-induced
respiratory
depression
(OIRD).
However,
severe
hypoxia-induced
gasping,
low-dimensional
reconfigure
from
rotational
all-or-none,
ballistic
efforts.
Neuronal
ensembles,
coactive
groups
of
neurons
found
in
spontaneous
and
evoked
cortical
activity,
are
causally
related
to
memories
perception,
but
it
is
still
unknown
how
stable
or
flexible
they
over
time.
We
used
two-photon
multiplane
calcium
imaging
track
weeks
the
activity
same
pyramidal
layer
2/3
visual
cortex
from
awake
mice
recorded
their
visually
responses.
Less
than
half
remained
active
across
any
two
sessions.
These
formed
ensembles
that
lasted
weeks,
some
were
also
transient
appeared
only
one
single
session.
Stable
preserved
most
for
up
46
days,
our
longest
imaged
period,
these
'core'
cells
had
stronger
functional
connectivity.
Our
results
demonstrate
neuronal
can
last
could,
principle,
serve
as
a
substrate
long-lasting
representation
perceptual
states
memories.
Neuronal
ensembles
are
coactive
groups
of
cortical
neurons,
found
in
spontaneous
and
evoked
activity,
that
can
mediate
perception
behavior.
To
understand
the
mechanisms
lead
to
formation
ensembles,
we
co-activated
layer
2/3
pyramidal
neurons
brain
slices
from
mouse
visual
cortex,
animals
both
sexes,
replicating
vitro
an
optogenetic
protocol
generate
vivo.
Using
whole-cell
perforated
patch-clamp
pair
recordings
that,
after
or
electrical
stimulation,
coactivated
increased
their
correlated
a
hallmark
ensemble
formation.
Coactivated
showed
small
biphasic
changes
presynaptic
plasticity,
with
initial
depression
followed
by
potentiation
recovery
period.
Optogenetic
stimulation
also
induced
significant
increases
frequency
amplitude
EPSPs,
even
single-cell
stimulation.
In
addition,
observed
unexpected
strong
persistent
neuronal
excitability
membrane
resistance
reductions
spike
threshold.
A
pharmacological
agent
blocks
reverted
this
effect.
These
explain
synaptic
plasticity.
We
conclude
cell-intrinsic
involved
ensembles.
propose
‘iceberg’
model,
which
makes
subthreshold
connections
suprathreshold,
enhancing
effect
already
existing
synapses,
generating
new
ensemble.
Nature Neuroscience,
Journal Year:
2024,
Volume and Issue:
unknown
Published: Jan. 5, 2024
Abstract
Breathing
is
vital
and
must
be
concurrently
robust
flexible.
This
rhythmic
behavior
generated
maintained
within
a
rostrocaudally
aligned
set
of
medullary
nuclei
called
the
ventral
respiratory
column
(VRC).
The
properties
individual
VRC
are
well
known,
yet
technical
challenges
have
limited
interrogation
entire
population
simultaneously.
Here
we
characterize
over
15,000
units
using
high-density
electrophysiology,
opto-tagging
histological
reconstruction.
Population
dynamics
analysis
reveals
consistent
rotational
trajectories
through
low-dimensional
neural
manifold.
These
rotations
even
during
opioid-induced
depression.
During
severe
hypoxia-induced
gasping,
reconfigure
from
to
all-or-none,
ballistic
efforts.
Thus,
latent
provide
unifying
lens
onto
activities
large,
heterogeneous
populations
neurons
involved
in
simple,
vital,
breathing,
describe
how
these
respond
variety
perturbations.
Nature Communications,
Journal Year:
2024,
Volume and Issue:
15(1)
Published: April 12, 2024
Abstract
Neuronal
ensembles
are
groups
of
neurons
with
correlated
activity
associated
sensory,
motor,
and
behavioral
functions.
To
explore
how
encode
information,
we
investigated
responses
visual
cortical
in
awake
mice
using
volumetric
two-photon
calcium
imaging
during
stimulation.
We
identified
neuronal
employing
an
unsupervised
model-free
algorithm
and,
besides
activated
by
the
stimulus
(termed
“onsemble”),
also
find
that
specifically
inactivated
“offsemble”).
Offsemble
showed
faster
decay
stimuli,
suggesting
selective
inhibition.
In
response
to
each
ensemble
(onsemble+offsemble)
exhibited
small
trial-to-trial
variability,
high
orientation
selectivity,
superior
predictive
accuracy
for
orientation,
surpassing
sum
individual
neuron
activity.
Thus,
combined
activation
inactivation
enhances
encoding
as
emergent
distributed
neural
code.
Experimental Physiology,
Journal Year:
2025,
Volume and Issue:
unknown
Published: Feb. 24, 2025
Chronic
sustained
hypoxia
(CSH)
is
known
to
induce
functional
and
structural
changes
in
the
respiratory
system.
The
diaphragm,
as
main
inspiratory
muscle
of
mammals,
particularly
important
neuromotor
regulation
respiration.
Diaphragm
electromyography
(dEMG)
records
sum
motor
unit
action
potentials
(MUAP)
provides
information
regarding
recruitment
frequency
coding
during
contraction.
We
aimed
assess
dEMG
activity
following
CSH.
Herein,
eight
male
Wistar
rats
(2-3
months)
were
subjected
CSH
(10
±
0.5%
O2)
for
10
successive
days.
In
vivo
recording
was
employed
diaphragm
electrical
activity.
Filtered
rectified
dEMGs
used
further
analyses.
Findings
showed
that
consecutive
days
significantly
changed
pattern
signals.
slope
rising
phase
RMS-enveloped
bursts
much
steeper
compared
normoxic
control
(rise
time:
373
vs.
286
ms;
P
=
0.005).
Burst
decreased
(59
42
bursts/min;
0.0001),
which
associated
with
a
significant
increase
burst
amplitude
(P
0.039)
inter-burst
duration
(0.65
0.88
s;
0.041).
Power
spectral
density
analyses
mean
(293
266
Hz;
0.033)
high-frequency
low-frequency
power
ratio
0.009)
signals
declined
rats.
Notably,
regularity
did
not
change
Glia,
Journal Year:
2022,
Volume and Issue:
70(9), P. 1630 - 1651
Published: May 10, 2022
Abstract
Neuron–microglia
communication
through
the
Cx3cr1–Cx3cl1
axis
is
essential
for
development
and
refinement
of
neural
circuits,
which
determine
their
function
into
adulthood.
In
present
work
we
set
out
to
extend
behavioral
characterization
Cx3cr1
−/−
mice
evaluating
innate
behaviors
spatial
navigation,
both
dependent
on
hippocampal
function.
Our
results
show
that
Cx3cr1‐deficient
mice,
some
changes
in
microglial
synaptic
terminals
morphology
density,
exhibit
alterations
activities
daily
living
rapid
encoding
novel
information
that,
nonetheless,
improves
with
training.
A
substrate
these
cognitive
deficiencies
was
found
form
dysfunction
CA3
region
hippocampus,
a
marked
impact
mossy
fiber
(MF)
pathway.
network
analysis
microcircuit
reveals
effect
functional
connectivity
among
neurons
diminished
strength
topological
reorganization
mice.
Neonatal
population
activity
shows
around
giant
depolarizing
potentials,
first
network‐driven
suggesting
adult
subjects
arise
early
postnatal
development,
critical
period
microglia‐dependent
circuit
refinement.
interruption
Cx3cr1–Cx3cl1/neuron–microglia
leads
configuration
affect
learned
behaviors.
Previously
our
computational
modeling
studies
(Phillips
et
al.,
2019)
proposed
that
neuronal
persistent
sodium
current
(INaP)
and
calcium-activated
non-selective
cation
(ICAN)
are
key
biophysical
factors
that,
respectively,
generate
inspiratory
rhythm
burst
pattern
in
the
mammalian
preBötzinger
complex
(preBötC)
respiratory
oscillator
isolated
vitro.
Here,
we
experimentally
tested
confirmed
three
predictions
of
model
from
new
simulations
concerning
roles
INaP
ICAN:
(1)
ICAN
blockade
have
opposite
effects
on
relationship
between
network
excitability
preBötC
rhythmic
activity;
(2)
is
essential
for
rhythmogenesis;
(3)
generating
amplitude
output
but
not
generation.
These
were
via
optogenetic
manipulations
during
graded
or
by
pharmacological
slices
vitro
containing
rhythmically
active
medulla
oblongata
neonatal
mice.
Our
results
support
advance
hypothesis
mechanistically
underlie
generation,
preBötC.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2020,
Volume and Issue:
unknown
Published: July 29, 2020
Abstract
Neuronal
ensembles
are
coactive
groups
of
cortical
neurons,
found
in
spontaneous
and
evoked
activity,
that
can
mediate
perception
behavior.
To
understand
the
mechanisms
lead
to
formation
ensembles,
we
co-activated
optogenetically
electrically
layer
2/3
pyramidal
neurons
brain
slices
from
mouse
visual
cortex,
animals
both
sexes,
replicating
vitro
an
optogenetic
protocol
generate
vivo
.
Using
whole-cell
perforated
patch-clamp
pair
recordings
find
that,
after
or
electrical
stimulation,
coactivated
increase
their
correlation
a
hallmark
ensemble
formation.
Coactivated
showed
small
biphasic
changes
presynaptic
plasticity,
with
initial
depression
followed
by
potentiation
recovery
period.
Unexpectedly,
stimulation-induced
significant
increases
frequency
amplitude
EPSPs,
even
single-cell
stimulation.
In
addition,
observed
strong
persistent
neuronal
excitability
membrane
resistance
reduction
spike
threshold.
A
pharmacological
agent
blocks
revert
this
effect.
These
may
partly
explain
synaptic
plasticity.
We
propose
cell-intrinsic
involved
ensembles.
“iceberg”
model,
which
increased
makes
subthreshold
connections
suprathreshold,
enhancing
effect
already
existing
synapses,
generating
new
ensemble.
Significance
Statement
investigated
cellular
underlying
i.e.,
spontaneously
neurons.
electrophysiology
neocortex
replicated
generates
After
plasticity
and,
unexpectedly,
major
excitability,
input
resistance,
reductions
firing
The
Our
results
reveal
role
for
intrinsic
establishment