Neural
circuits
carry
out
complex
computations
that
allow
animals
to
evaluate
food,
select
mates,
move
toward
attractive
stimuli,
and
away
from
threats.
In
insects,
the
subesophageal
zone
(SEZ)
is
a
brain
region
receives
gustatory,
pheromonal,
mechanosensory
inputs
contributes
control
of
diverse
behaviors,
including
feeding,
grooming,
locomotion.
Despite
its
importance
in
sensorimotor
transformations,
study
SEZ
has
been
hindered
by
limited
knowledge
underlying
diversity
neurons.
Here,
we
generate
collection
split-GAL4
lines
provides
precise
genetic
targeting
138
different
cell
types
adult
Drosophila
melanogaster,
comprising
approximately
one
third
all
We
characterize
single-cell
anatomy
these
neurons
find
they
cluster
morphology
into
six
supergroups
organize
discrete
anatomical
domains.
majority
local
interneurons
are
not
classically
polarized,
suggesting
rich
processing,
whereas
projection
tend
be
conveying
information
number
higher
regions.
This
insight
organization
generates
resources
will
facilitate
further
their
contributions
sensory
processing
behavior.
Neuron,
Journal Year:
2022,
Volume and Issue:
110(10), P. 1700 - 1711.e6
Published: March 14, 2022
Topographic
maps,
the
systematic
spatial
ordering
of
neurons
by
response
tuning,
are
common
across
species.
In
Drosophila,
lobula
columnar
(LC)
neuron
types
project
from
optic
lobe
to
central
brain,
where
each
forms
a
glomerulus
in
distinct
position.
However,
advantages
this
glomerular
arrangement
unclear.
Here,
we
examine
functional
and
relationships
10
glomeruli
using
single-neuron
calcium
imaging.
We
discover
novel
detectors
for
objects
smaller
than
lens
resolution
(LC18)
complex
line
motion
(LC25).
find
that
spatially
clustered
selectivity
looming
versus
drifting
object
ordered
size
tuning
form
topographic
visual
feature
map.
Furthermore,
connectome
analysis
shows
downstream
integrate
sparse
subsets
possible
combinations,
which
biased
encoding
similar
features.
LC
thus
an
explicit
example
topographically
organized
facilitate
circuit
integration.
Nature Neuroscience,
Journal Year:
2023,
Volume and Issue:
26(4), P. 682 - 695
Published: March 23, 2023
Knowing
one's
own
behavioral
state
has
long
been
theorized
as
critical
for
contextualizing
dynamic
sensory
cues
and
identifying
appropriate
future
behaviors.
Ascending
neurons
(ANs)
in
the
motor
system
that
project
to
brain
are
well
positioned
provide
such
signals.
However,
what
ANs
encode
where
they
convey
these
signals
remains
largely
unknown.
Here,
through
large-scale
functional
imaging
behaving
animals
morphological
quantification,
we
report
encoding
targeting
of
hundreds
genetically
identifiable
adult
fly,
Drosophila
melanogaster.
We
reveal
states,
specifically
conveying
self-motion
anterior
ventrolateral
protocerebrum,
an
integrative
hub,
discrete
actions
gnathal
ganglia,
a
locus
action
selection.
Additionally,
AN
projection
patterns
within
predictive
their
encoding.
Thus,
ascending
populations
poised
inform
distinct
hubs
ongoing
behaviors
may
important
substrate
computations
required
adaptive
behavior.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: June 6, 2023
Abstract
Animal
behavior
is
principally
expressed
through
neural
control
of
muscles.
Therefore
understanding
how
the
brain
controls
requires
mapping
neuronal
circuits
all
way
to
motor
neurons.
We
have
previously
established
technology
collect
large-volume
electron
microscopy
data
sets
tissue
and
fully
reconstruct
morphology
neurons
their
chemical
synaptic
connections
throughout
volume.
Using
these
tools
we
generated
a
dense
wiring
diagram,
or
connectome,
for
large
portion
Drosophila
central
brain.
However,
in
most
animals,
including
fly,
majority
are
located
outside
center
closer
body,
i.e.
mammalian
spinal
cord
insect
ventral
nerve
(VNC).
In
this
paper,
extend
our
effort
map
full
by
generating
connectome
VNC
male
fly.
Cell,
Journal Year:
2023,
Volume and Issue:
186(12), P. 2556 - 2573.e22
Published: May 25, 2023
In
Drosophila,
a
dedicated
olfactory
channel
senses
male
pheromone,
cis-vaccenyl
acetate
(cVA),
promoting
female
courtship
while
repelling
males.
Here,
we
show
that
separate
cVA-processing
streams
extract
qualitative
and
positional
information.
cVA
sensory
neurons
respond
to
concentration
differences
in
5-mm
range
around
male.
Second-order
projection
encode
the
angular
position
of
by
detecting
inter-antennal
concentration,
which
are
amplified
through
contralateral
inhibition.
At
third
circuit
layer,
identify
47
cell
types
with
diverse
input-output
connectivity.
One
population
responds
tonically
flies,
second
is
tuned
looming,
integrates
taste
coincidentally
promote
mating.
The
separation
features
resembles
mammalian
what
where
visual
streams;
together
multisensory
integration,
this
enables
behavioral
responses
appropriate
specific
ethological
contexts.
BMC Bioinformatics,
Journal Year:
2024,
Volume and Issue:
25(1)
Published: March 15, 2024
Abstract
Background
Neuroscience
research
in
Drosophila
is
benefiting
from
large-scale
connectomics
efforts
using
electron
microscopy
(EM)
to
reveal
all
the
neurons
a
brain
and
their
connections.
To
exploit
this
knowledge
base,
researchers
relate
connectome’s
structure
neuronal
function,
often
by
studying
individual
neuron
cell
types.
Vast
libraries
of
fly
driver
lines
expressing
fluorescent
reporter
genes
sets
have
been
created
imaged
confocal
light
(LM),
enabling
targeting
for
experimentation.
However,
creating
line
driving
gene
expression
within
single
found
an
EM
connectome
remains
challenge,
as
it
typically
requires
identifying
pair
where
only
interest
expressed
both.
This
task
other
emerging
scientific
workflows
require
finding
similar
across
large
data
different
modalities.
Results
Here,
we
present
NeuronBridge,
web
application
easily
rapidly
putative
morphological
matches
between
We
describe
functionality
construction
NeuronBridge
service,
including
its
user-friendly
graphical
user
interface
(GUI),
extensible
model,
serverless
cloud
architecture,
massively
parallel
image
search
engine.
Conclusions
fills
critical
gap
workflow
used
hundreds
neuroscience
around
world.
offer
our
software
code,
open
APIs,
processed
integration
reuse,
provide
service
at
http://neuronbridge.janelia.org
.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: April 18, 2024
Vision
provides
animals
with
detailed
information
about
their
surroundings,
conveying
diverse
features
such
as
color,
form,
and
movement
across
the
visual
scene.
Computing
these
parallel
spatial
requires
a
large
network
of
neurons,
that
in
distant
flies
humans,
regions
comprise
half
brain's
volume.
These
brain
often
reveal
remarkable
structure-function
relationships,
neurons
organized
along
maps
shapes
directly
relate
to
roles
processing.
To
unravel
stunning
diversity
complex
system,
careful
mapping
neural
architecture
matched
tools
for
targeted
exploration
circuitry
is
essential.
Here,
we
report
new
connectome
right
optic
lobe
from
male
Drosophila
central
nervous
system
FIB-SEM
volume
comprehensive
inventory
fly's
neurons.
We
developed
computational
framework
quantify
anatomy
establishing
basis
interpreting
how
vision.
By
integrating
this
analysis
connectivity
information,
neurotransmitter
identity,
expert
curation,
classified
~53,000
into
727
types,
which
are
systematically
described
named
first
time.
Finally,
share
an
extensive
collection
split-GAL4
lines
our
neuron
type
catalog.
Together,
set
data
unlock
possibilities
systematic
investigations
vision
Drosophila,
foundation
deeper
understanding
sensory
Animal
behavior
is
principally
expressed
through
neural
control
of
muscles.
Therefore
understanding
how
the
brain
controls
requires
mapping
neuronal
circuits
all
way
to
motor
neurons.
We
have
previously
established
technology
collect
large-volume
electron
microscopy
data
sets
tissue
and
fully
reconstruct
morphology
neurons
their
chemical
synaptic
connections
throughout
volume.
Using
these
tools
we
generated
a
dense
wiring
diagram,
or
connectome,
for
large
portion
Drosophila
central
brain.
However,
in
most
animals,
including
fly,
majority
are
located
outside
center
closer
body,
i.e.
mammalian
spinal
cord
insect
ventral
nerve
(VNC).
In
this
paper,
extend
our
effort
map
full
by
generating
connectome
VNC
male
fly.
Current Biology,
Journal Year:
2024,
Volume and Issue:
34(4), P. 808 - 824.e6
Published: Jan. 30, 2024
Many
motor
control
systems
generate
multiple
movements
using
a
common
set
of
muscles.
How
are
premotor
circuits
able
to
flexibly
diverse
movement
patterns?
Here,
we
characterize
the
neuronal
that
drive
distinct
courtship
songs
Drosophila
melanogaster.
Male
flies
vibrate
their
wings
toward
females
produce
two
different
song
modes—pulse
and
sine
song—which
signal
species
identity
male
quality.
Using
cell-type-specific
genetic
reagents
connectome,
provide
cellular
synaptic
map
in
ventral
nerve
cord
these
examine
how
activating
or
inhibiting
each
cell
type
within
affects
song.
Our
data
reveal
circuit
is
organized
into
nested
feedforward
pathways
with
extensive
reciprocal
feedback
connections.
The
larger
network
produces
pulse
song,
more
complex
ancestral
form.
A
subset
this
simpler
recent
Such
organization
may
be
feature
which
evolution
has
layered
increasing
flexibility
onto
basic
pattern.