Frontiers in Oncology,
Journal Year:
2020,
Volume and Issue:
10
Published: Nov. 27, 2020
Objective:
The
roles
of
long
non-coding
RNAs
(lncRNAs)
in
the
diagnosis
clear
cell
renal
carcinoma
(ccRCC)
are
still
not
well-defined.
We
aimed
to
identify
differentially
expressed
lncRNAs
and
mRNAs
plasma
ccRCC
patients
health
controls
systematically.
Methods:
Expression
profile
healthy
was
analyzed
based
on
microarray
assay.
Gene
ontology
(GO)
Kyoto
Encyclopedia
Genes
Genomes
(KEGG)
pathway-based
approaches
were
used
investigate
biological
function
signaling
pathways
mediated
by
mRNAs.
SOCS2-AS1
selected
for
validation
using
Real-Time
PCR.
further
compared
with
E-MTAB-1830
datasets
Venn
NetworkAnalyst
website.
GEPIA
ULCAN
websites
utilized
evaluation
expression
level
mRNA
their
association
overall
survival
(OS).
Results:
A
total
3,664
identified
patients,
including
1,511
up-regulated
2,153
down-regulated
(fold
change
≥2
P
<
0.05),
respectively.
There
2,268
mRNAs,
932
1,336
respectively
0.05).
Pathway
analysis
deregulated
mainly
involved
melanogenesis
Hippo
pathway
(
In
line
lncRNA
findings,
tissues,
as
well
lines.
Compared
gene
profiles,
we
18
87
differently
both
neoplastic
tissues
ccRCC.
10
EPB41L4B,
CCND1,
GGT1,
CGNL1,
CYSLTR1,
PLAUR,
UGT3A1,
PROM2,
MUC12
,
PCK1
)
correlated
(OS)
rate
websites.
Conclusions:
firstly
reported
systemically.
Several
identified,
which
might
serve
diagnostic
or
prognostic
markers.
these
should
be
validated.
Our
study
may
contribute
future
treatment
provide
novel
insights
into
cancer
biology.
Aging,
Journal Year:
2020,
Volume and Issue:
12(11), P. 11025 - 11041
Published: June 9, 2020
The
role
of
LncRNA
ADAMTS9-AS2
in
the
regulation
chemoresistance
gastric
cancer
(GC)
is
largely
unknown.
Here
we
found
that
was
low-expressed
GC
tissues
and
cells
compared
to
their
normal
counterparts.
In
addition,
inhibited
miR-223-3p
expressions
by
acting
as
competing
endogenous
RNA,
levels
showed
negative
correlations
tissues.
Of
note,
overexpression
cell
viability
motility
sponging
miR-223-3p.
were
lower,
higher
cisplatin-resistant
(CR-GC)
than
parental
cisplatin-sensitive
(CS-GC)
cells.
enhanced
cytotoxic
effects
cisplatin
on
CR-GC
cells,
which
reversed
overexpressing
Furthermore,
increased
NLRP3
targeting
miR-223-3p,
upregulation
triggered
pyroptotic
death
treated
activating
inflammasome
through
downregulating
Finally,
promoting
abrogated
pyroptosis
inhibitor
Necrosulfonamide
(NSA).
Collectively,
acted
a
tumor
suppressor
sensitivity
mediated
Frontiers in Cell and Developmental Biology,
Journal Year:
2019,
Volume and Issue:
7
Published: Oct. 2, 2019
Background:
LncRNAs
have
been
shown
to
play
essential
roles
in
cancer
therapeutic
response.
However,
the
detailed
mechanism
of
lncRNAs
temozolomide
(TMZ)
resistance
glioblastoma
(GBM)
remain
be
elucidated.
Methods:
To
elucidate
maintaining
TMZ
resistance,
we
constructed
two
TMZ-resistant
GBM
cell
lines
(T98G-R/U118-R).
from
four
public
datasets
were
reanalyzed,
and
candidate
lncRNA
ADAMTS9-AS2
was
evaluated
TMZ-treated
patients
vitro
lines.
Results:
Reanalysis
expression
profiles
identified
as
significantly
overexpressed
cells
positively
associated
with
IC50
cells.
Overexpression
also
poor
response
shorter
progression-free
survival
(PFS)
patients.
Knockdown
inhibited
proliferation
attenuated
TMZ,
well
mitigating
invasion
migration
Subsequent
investigations
indicated
that
reduced
suppressed
FUS
protein,
which
predicted
a
direct
substrate
ADAMTS9-AS2.
Expression
trends
directly
correlated
those
ADAMTS9-AS2,
by
increasing
concentrations
prolonged
treatment
TMZ.
RNA
pull-down
RIP
assays
both
endogenous
exogenous
binds
RRM
Znf_RanBP2
domains
FUS,
consequently
protein
expression.
half-life
decreased
stability
via
K48
ubiquitin
degradation.
Moreover,
E3
ubiquitin-protein
ligase
MDM2
interacts
down
regulates
while
facilitate
its
binding
MDM2.
interaction
between
mediates
ubiquitination.
Additionally,
knockdown
ADAMTS9-AS2/FUS
signaling
axis
alleviated
progression
metastasis
Conclusion:
possessed
novel
function
promotes
upregulating
FUS/MDM2
The
or
combination
competitively
inhibiting
MDM2-dependent
ubiquitination
resulting
enhanced
resistance.
Our
results
suggest
ADAMTS9-AS2/
may
represent
suitable
prognostic
biomarker
potential
target
therapy.
Cancer Cell International,
Journal Year:
2023,
Volume and Issue:
23(1)
Published: Feb. 2, 2023
Renal
cell
carcinoma
(RCC)
is
the
second
lethal
urogenital
malignancy
with
increasing
incidence
and
mortality
in
world.
Clear
renal
(ccRCC)
one
major
subtype
of
RCC,
which
accounts
for
about
70
to
80%
all
RCC
cases.
Although
many
innovative
therapeutic
options
have
emerged
during
last
few
decades,
efficacy
these
treatments
ccRCC
patients
very
limited.
To
date,
prognosis
advanced
or
metastatic
still
poor.
The
5-year
survival
rate
remains
less
than
10%,
mainly
attributes
complexity
heterogeneity
tumor
microenvironment
(TME).
It
has
been
demonstrated
that
long
non-coding
RNAs
(lncRNAs)
perform
an
indispensable
role
initiation
progression
various
tumors.
They
mostly
function
as
sponges
microRNAs
(miRNAs)
regulate
expression
target
genes,
finally
influence
growth,
metastasis,
apoptosis,
drug
resistance
TME
cells.
However,
lncRNA/miRNA/mRNA
axis
poorly
understood.
In
this
review,
we
summarized
biological
pathogenesis
ccRCC,
then
discussed
how
TME,
highlighted
their
potential
application
novel
biomarkers
targets
ccRCC.
Frontiers in Oncology,
Journal Year:
2020,
Volume and Issue:
10
Published: Aug. 20, 2020
Kidney
renal
clear
cell
carcinoma
(KIRC)
is
the
predominant
pathological
subtype
of
(RCC)
in
adults.
Long
non-coding
RNAs
(lncRNAs)
are
an
important
class
gene
expression
regulators
and
serve
fundamental
roles
immune
regulation.
The
intent
this
study
to
develop
a
novel
immune-related
lncRNA
signature
accurately
predict
prognosis
for
KIRC
patients.
Here,
we
performed
genome-wide
comparative
analysis
profiles
537
patients
from
Cancer
Genome
Atlas
(TCGA)
database.
Cox
regression
model-identified
lncRNAs
were
extracted
constructing
five
(AC008105.3,
LINC02084,
AC243960.1,
AC093278.2,
AC108449.2)
with
ability
Univariate
multivariate
analyses
demonstrated
that
could
act
as
independent
prognostic
predictor
overall
survival
(OS).
With
further
investigation
on
different
clinicopathological
parameters,
found
divide
samples
into
high-risk
groups
shorter
OS
low-risk
longer
subgroups.
Principal
component
suggested
drew
distinction
between
high-
based
lncRNAs.
status
two
was
observed
set
enrichment
ESTIMATE
algorithm.
Except
expressions
other
four
significantly
upregulated
tumor
tissues.
In
summary,
identified
immune-lncRNA
had
clinical
implications
prediction
be
exploited
underlying
therapeutic
targets
Biomedicine & Pharmacotherapy,
Journal Year:
2020,
Volume and Issue:
128, P. 110323 - 110323
Published: June 8, 2020
Clear
cell
renal
carcinoma
(ccRCC),
the
most
frequent
subtype
of
(RCC),
is
characterized
by
high
relapse
rate
and
mortality.
Long
non-coding
RNAs
(lncRNAs)
are
critical
participants
during
cancer
development.
LncRNA
DARS
antisense
RNA
1
(DARS-AS1),
a
newly-found
lncRNA,
not
specifically
reported
in
ccRCC.
However,
Gene
Expression
Profiling
Interactive
Analysis
(GEPIA)
starBase
databases
revealed
up-regulation
DARS-AS1
Current
study
investigated
function
mechanism
Functional
assays
including
colony
formation
assay,
EdU
caspase-3
activity
detection,
flow
cytometry
analysis
JC-1
assay
were
implemented
to
identify
role
As
result,
silencing
retarded
proliferation
facilitated
apoptosis
ccRCC
cells.
Moreover,
mainly
cytoplasmic
localization
lncRNA
was
verified
Then,
we
demonstrated
that
positively
regulated
its
nearby
gene,
aspartyl-tRNA
synthetase
(DARS),
sequestering
miR-194−5p.
testified
as
oncogene
worked
tumor-facilitator
through
miR-194−5p/DARS
signaling.
In
summary,
this
firstly
uncovered
boosted
expression
via
absorbing
miR-194−5p,
therefore
contributing
malignancy
Our
findings
may
be
helpful
for
opening
new
strategies
treatment.
Cancers,
Journal Year:
2020,
Volume and Issue:
12(8), P. 2148 - 2148
Published: Aug. 3, 2020
Available
systemic
treatment
options
for
cancers
of
the
genitourinary
system
have
experienced
great
progress
in
last
decade.
However,
a
large
proportion
patients
eventually
develop
resistance
to
treatment,
resulting
disease
progression
and
shorter
overall
survival.
Biomarkers
indicating
increasing
cancer
therapies
are
yet
enter
clinical
routine.
Long
non-coding
RNAs
(lncRNA)
non-protein
coding
RNA
transcripts
longer
than
200
nucleotides
that
exert
multiple
types
regulatory
functions
all
known
cellular
processes.
Increasing
evidence
supports
role
lncRNAs
development
progression.
Additionally,
their
involvement
drug
across
various
entities,
including
malignancies,
starting
be
discovered.
Consequently,
been
suggested
as
factors
novel
therapeutic
strategies
overcome
cancer.
In
this
review,
existing
evidences
on
mechanisms
system,
renal
cell
carcinoma,
bladder
cancer,
prostate
testicular
will
highlighted
discussed
facilitate
encourage
further
research
field.
We
summarize
significant
number
with
proposed
pathways
available
reported
studies.
Reproductive Medicine and Biology,
Journal Year:
2024,
Volume and Issue:
23(1)
Published: Jan. 1, 2024
To
investigate
whether
long
noncoding
RNAs
(lncRNAs)
are
involved
in
the
development
or
malignant
behavior
of
ovarian
high-grade
serous
carcinoma
(HGSC),
we
attempted
to
identify
lncRNAs
specific
HGSC.
DNA and Cell Biology,
Journal Year:
2020,
Volume and Issue:
39(9), P. 1532 - 1544
Published: July 9, 2020
Increasing
evidence
suggests
that
aberrant
long
noncoding
(lnc)
RNA
expression
plays
a
vital
role
in
gastric
cancer
(GC)
initiation
and
progression.
Thus,
we
aimed
to
develop
lncRNA-based
risk
signature
nomogram
predict
overall
survival
(OS)
for
patients
with
GC.
Our
primary
cohort
was
composed
of
341
clinical
lncRNA
data
The
Cancer
Genome
Atlas
stomach
adenocarcinoma
(TCGA
STAD),
the
internal
validation
172
randomly
assigned
patients,
external
300
from
GSE62254
dataset.
A
were
developed
validated
on
cohorts.
Furthermore,
gene
set
enrichment
analysis
(GSEA)
used
investigate
pathway
signature.
patterns
several
lncRNAs
also
investigated
samples
10
GC
patients.
We
identified
14-lncRNA
highly
associated
OS
GC,
which
performed
well
evaluation
C-index,
area
under
curve,
calibration
curves.
In
addition,
univariate
multivariate
Cox
regression
analyses
indicated
an
independent
predictive
factor
Therefore,
incorporating
factors
constructed
suggested
powerful
values
TCGA
other
two
GSEA
may
regulate
autophagy
pathway,
affecting
tumorigenesis
prognosis
Experimental
demonstrated
showed
same
trend
both
our
STAD
These
results
suggest
effective
prognostic
indicators