bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: Nov. 8, 2023
Abstract
Sedimentation
is
a
major
cause
of
global
near-shore
coral
reef
decline.
While
negative
impacts
sedimentation
on
community
composition
have
been
well
documented,
the
effects
metabolism
in
situ
received
comparatively
little
attention.
Using
transcriptomics,
we
identified
gene
expression
patterns
changing
across
previously
defined
threshold
that
was
deemed
critical
due
to
changes
cover
and
composition.
We
genes,
pathways,
molecular
processes
associated
with
this
transition
may
allow
corals,
such
as
Porites
lobata
,
tolerate
chronic,
severe
persist
turbid
environments.
Alternative
energy
generation
pathways
help
maintain
persistent
stress
response
survive
while
light
oxygen
availability
are
diminished.
found
evidence
for
genes
linked
increased
environmental
sensing
cellular
communication
likely
efficiently
respond
pathogen
challenges.
Cell
damage
increases
under
stress;
consequently,
apoptosis
over-represented
sedimentation,
consequence
damaged
cell
removal
colony
integrity.
The
results
presented
here
provide
framework
field
conditions.
Testing
its
related
hypotheses
using
multi-omics
approaches
can
further
our
understanding
metabolic
plasticity
acclimation
potential
corals
their
resilience
systems.
International Journal of Remote Sensing,
Journal Year:
2023,
Volume and Issue:
45(23), P. 8937 - 8967
Published: Oct. 24, 2023
An
alarming
amount
of
damage
has
occurred
to
coral
reefs
in
Indonesia,
with
the
causes
such
either
from
human
activities
(anthropogenic
causes)
or
natural
processes.
This
study
investigated
long-term
dynamic
changes
reef
habitats
eight
selected
islands
Spermonde
archipelago,
using
remote
sensing
and
historical
information.
A
series
Landsat
images
recorded
different
years
(i.e.
1990,
1996,
2002,
2008,
2013,
2016,
2018,
2019,
2022)
were
used
map
benthic
each
island
live
coral,
dead
seagrass,
sand,
rubble,
mix
bottom).
The
analysis
estimated
a
total
303.47
hectares
76.26%
loss
studied
since
1990.
In
contrast,
there
was
substantial
increase
algae
at
around
108.63
101.91
hectares,
respectively.
Strong
similar
negative
coefficient
determination
between
cover
both
(R2
=
0.96,
Y
-2.95)
rubble
0.94,
-2.85)
suggested
that
(e.g.
destructive
fishing
activities,
anchors,
mining)
processes
sedimentation,
bleaching,
diseases,
predation)
played
comparable
roles
degradation
Archipelago.
Furthermore,
this
revealed
on
regardless
it
inhabited
uninhabited
influenced
by
extent
its
cover.
overall
highlighted
ongoing
factors
contributing
archipelago.
Further
research
monitoring
efforts
are
necessary
understand
mechanisms
driving
decline
increases
rubble.
knowledge
will
aid
developing
targeted
conservation
strategies
management
plans
protect
ecosystem
Archipelago
other
affected
regions
Indonesia.
Remote Sensing,
Journal Year:
2024,
Volume and Issue:
16(11), P. 1845 - 1845
Published: May 22, 2024
Coral
reefs
are
threatened
globally
by
compounding
stressors
of
accelerating
climate
change
and
deteriorating
water
quality.
Water
quality
plays
a
central
role
in
coral
reef
health.
Yet,
accurately
quantifying
at
large
scales
meaningful
for
monitoring
impacts
on
health
remains
challenge
due
to
the
complex
optical
conditions
typical
shallow
coastal
systems.
Here,
we
report
performance
32
remote
sensing
models
suspended
particulate
matter
chlorophyll
concentrations
as
well
colored
dissolved
organic
absorption,
over
concentration
ranges
relevant
ecology
using
airborne
imaging
spectroscopy
field
measurements
across
62
stations
nearshore
Hawaiian
waters.
Models
were
applied
reflectance
spectra
processed
with
suite
approaches
compensate
glint
other
above-water
spectra.
Results
showed
reliable
estimation
(RMSE
=
2.74
mg
L−1)
accurate
but
imprecise
0.46
μg
0.03
m−1).
Accurately
correcting
minimize
sun
sky
effects
significantly
improved
model
performance.
here
suggest
both
hyperspectral
multispectral
platforms
rapid
application
simple
algorithms
can
be
useful
reefs.
Frontiers in Physiology,
Journal Year:
2024,
Volume and Issue:
15
Published: June 11, 2024
Sedimentation
is
a
major
cause
of
global
near-shore
coral
reef
decline.
Although
the
negative
impacts
sedimentation
on
community
composition
have
been
well-documented,
effects
metabolism
in
situ
received
comparatively
little
attention.
Using
transcriptomics,
we
identified
gene
expression
patterns
changing
across
previously
defined
threshold
that
was
deemed
critical
due
to
changes
cover
and
composition.
We
genes,
pathways,
molecular
processes
associated
with
this
transition
may
allow
corals,
such
as
Porites
lobata
,
tolerate
chronic,
severe
persist
turbid
environments.
Alternative
energy
generation
pathways
help
P.
maintain
persistent
stress
response
survive
when
availability
light
oxygen
diminished.
found
evidence
for
genes
linked
increased
environmental
sensing
cellular
communication
likely
efficiently
respond
pathogen
challenges.
Cell
damage
increases
under
stress;
consequently,
apoptosis
over-represented
sedimentation,
consequence
damaged
cell
removal
colony
integrity.
The
results
presented
here
provide
framework
field
conditions.
Testing
its
related
hypotheses
using
multi-omics
approaches
can
deepen
our
understanding
metabolic
plasticity
acclimation
potential
corals
their
resilience
systems.
Biodiversitas Journal of Biological Diversity,
Journal Year:
2024,
Volume and Issue:
25(4)
Published: April 14, 2024
Abstract.
Isdianto
A,
Fewila
AR,
Rijal
SS,
Setyanto
Fathah
AL,
Atikawati
D,
Putri
BM,
Puspitasari
ID,
Luthfi
OM.
2024.
Coral
disease
prevalence
and
compromised
health
in
the
Sempu
Island
Nature
Reserve,
Malang
District,
Indonesia.
Biodiversitas
25:
1404-1412.
Since
Dutch
colonialization
era,
District's
Strait
has
been
designated
a
natural
reserve.
Environmental
changes
human
activities
have
contributed
to
14.28%
coral
cover
Strait.
This
study
aims
assess
detect
diseases
or
conditions.
At
five
stations,
data
were
gathered
utilizing
Underwater
Photo
Transect
method
with
10-meter
interval
1x1
meter
transect
implemented
across
100
meters.
The
average
is
14.28%,
considered
inadequate
according
categories
for
determining
reef
status.
Fish
Bite,
Black
Band
Disease
(BBD),
Ulcerative
White
Spots
(UWS),
Non-Focal
Bleaching
(NFBL),
Trematodiasis,
Pigmentation
Response
are
six
of
that
identified.
Sediment
damage
only
condition
With
an
15.35%,
(NFBL)
most
prevalent
disease;
(BBD)
lowest
at
0.8%.
insufficient
coverage
caused
by
surrounding
environmental
conditions
stress
corals
point
where
coral-eating
increased.
Indonesian Journal of Environmental Management and Sustainability,
Journal Year:
2023,
Volume and Issue:
7(2), P. 62 - 73
Published: June 7, 2023
The
water
system
or
hydrological
indicators
determine
the
good
and
bad
of
a
watershed’s
carrying
capacity.
include
discharge
fluctuations,
annual
flow
coefficient,
sediment
load,
flood
frequency,
use
index.
purpose
this
study
was
to
evaluate
capacity
Wanggu
watershed
based
on
indicators.
method
used
is
score
weight
for
all
indicator
data
in
accordance
with
evaluation
guidelines
research
sourced
from
primary
secondary
data.
Primary
comes
direct
observation,
while
agencies
related
research.
Data
analysis
using
Microsoft
Excel
monthly
by
producing
tables
figures.
results
indicate
that
fluctuations
regime
coefficient
River
Basin
are
96.45
which
classified
as
high,
well
erosion
surface
runoff,
namely
load
conditions
19.73
also
included
high
category.
While
value
0.32,
average
frequency
flooding
every
year
occurs
once
two
years
index
0.69.
three
parameters
categorized
being
middle
class.
From
accumulated
weights
scores
parameters,
111.25
class
So
has
poor
management
indicator.
Agricultural Water Management,
Journal Year:
2023,
Volume and Issue:
289, P. 108568 - 108568
Published: Oct. 21, 2023
Soil
compaction
and
natural
vegetation
removal
associated
to
agriculture
tends
promote
runoff
soil
erosion
with
potentially
adverse
onsite,
downstream,
global
impacts.
Although
coffee
farming
represents
a
fraction
of
the
world's
harvested
lands,
it
is
vital
crop
for
many
developing
nations
where
frequently
cultivated
on
prone,
high-relief,
wet
tropical
landscapes.
However,
limited
empirical
data
exists
farm
erosion.
This
article
attends
this
need
by
describing
results
rainfall
simulation
experiments
designed
evaluate
impact
sun-grown
coffee-farming
precipitation
excess,
infiltration
rates,
surface
overland
flow.
Results
show
that
rates
coffee-cultivated
fields
are
∼60
–
80%
relative
undisturbed
forested
slopes,
cultivation
increases
one
two
orders
magnitude
depending
presence
or
absence
mulch
weed
cover.
The
suggests
land
unsustainable
from
both
formation
an
agricultural
productivity
point
view.
Unsurfaced
access
roads
display
even
greater
than
surfaces
∼10%
soils
up
four-orders
above
background
grading
history
slope.
Farm-scale
annualized
∼3–24
Mg
ha-1
yr-1
actively
used
unpaved
road
abundance
as
account
∼99%
net
Implementing
efficient
control
strategies
farms
therefore
essential
reduce
their
current
impacts,
but
also
future
given
worldwide
surge
in
harvesting
areas
projected
upcoming
decades.
Frontiers in Remote Sensing,
Journal Year:
2024,
Volume and Issue:
5
Published: June 19, 2024
Decreased
water
quality
in
coastal
environments
due
to
land
alterations
by
human
activities
has
caused
stressed
and
degraded
coral
reefs
worldwide.
The
consequences
of
decreased
are
not
limited
but
also
affect
the
people’s
lives
increasing
incidence
diseases,
so
areas
highly
impacted
have
been
prioritized
for
management.
Guánica
Bay
Watershed
Management
Plan
was
developed
reduce
non-point
sources
pollution
that
arrive
at
bay
protect
adjacent
reefs,
however,
15
years
passed
since
its
creation
management
actions
evaluated.
purpose
this
study
evaluate
effectiveness
implemented
watershed.
Therefore,
objective
describe
temporal
trends
(2002–2008
2016–2022)
remotely
sensed
diffuse
attenuation
coefficient
490
nm
(Kd
),
a
indicator,
one
managed
(Guánica
Bay)
three
non-managed
(Guayanilla
Bay,
Descalabrado
River,
Guanajibo
River)
estuaries
Southwestern
Puerto
Rico.
This
achieved
integrating
ocean-color
satellite
imagery
from
MERIS-Envisat
OLCI-Sentinel-3
sensors
were
sampled
using
beyond-Before-After-Control-Impact
(beyond-BACI)
approach.
An
additional
oceanic
site
selected
continuity
between
estimates.
processed
SNAP
extract
Kd
values
estuaries.
analysis
beyond-BACI
found
significant
differences
periods
(before
after)
changes
unique
each
location
within
estuary.
lowest
variability
estuary
observed
(range
0.05–0.1
m
-1
)
highest
Guayanilla
(0.35
).
southern
showed
similar
trends,
all
having
peak
2018
trough
2020.
did
decrease
after
implementation
actions,
which
can
be
related
passage
several
hurricanes
during
period.
Further
should
done
as
new
data
is
available
last
suggested
plan.
Sustainability,
Journal Year:
2024,
Volume and Issue:
16(14), P. 5985 - 5985
Published: July 12, 2024
In
response
to
the
severe
fragmentation
of
Elkhorn
coral,
Acropora
palmata
(Lamarck,
1816),
stands
caused
by
a
major
winter
swell
(“Holy
Swell”)
in
March
2008,
an
emergency
community-based
low-tech
restoration
was
initiated
Vega
Baja,
Puerto
Rico.
Over
15-year
period,
coral
demographic
performance
and
fish
assemblages
were
monitored
across
four
restored
control
(non-restored)
100
m2
plots.
The
effort
proved
be
highly
successful,
leading
successful
survival
growth,
sustained
recovery
assemblages,
particularly
herbivore
guilds.
Significantly
increased
abundance,
biomass,
diversity
observed
all
trophic
functional
groups,
fishery
target
species,
geo-ecological
groups
both
These
positive
outcomes
attributed
enhanced
spatial
complexity
long-term
“nutrient
hotspots”
within
plots,
refugia
effect
from
benthic
complexity,
dispersal
paths
promoting
spillover
effects
adjacent
non-restored
areas.
Restoring
guilds
played
crucial
role
restoring
vital
ecological
processes
reef
ecosystem
resilience.
Recommendations
include
integrating
assemblage
into
strategies,
establishing
natural
nursery
plots
for
future
sourcing,
incorporating
concept
seascapes
holistic
ecosystem-based
approach
restoration.
Journal of Fluid Mechanics,
Journal Year:
2024,
Volume and Issue:
990
Published: July 10, 2024
Understanding
settling
motion
of
coral
grains
is
important
in
terms
protection
reef
systems
and
resotoration
the
associated
ecosystems.
In
this
paper,
a
series
laboratory
experiments
was
conducted
to
investigate
motion,
using
optical
microscopy
measure
shape
parameters
particle-filtering-based
object
tracking
reconstruct
three-dimensional
trajectory.
Three
characteristic
descent
regimes,
namely,
tumbling,
chaotic
fluttering,
are
classified
based
on
trajectory,
spiral
radius
variation
velocity
spectrum.
It
demonstrated
that
if
one
randomly
picks
up
grain,
then
probabilities
occurrence
three
regimes
approximately
$26\,\%$
,
$42\,\%$
$32\,\%$
respectively.
We
have
shown
first,
dimensionless
generally
increases
with
non-dimensional
diameter
Corey
factor
second,
drag
coefficient
decreases
Reynolds
number
factor.
Based
this,
applicability
existing
models
predicting
for
further.
Finally,
we
proposed
extended
velocity.
This
study
contributes
better
understanding
improves
our
predictive
capacity
complex
geometry.