Epitranscriptomics in atherosclerosis: Unraveling RNA modifications, editing and splicing and their implications in vascular disease DOI Creative Commons
Victoria Stopa, Dimitra Dafou, Korina Karagianni

et al.

Vascular Pharmacology, Journal Year: 2025, Volume and Issue: 159, P. 107496 - 107496

Published: April 14, 2025

Language: Английский

The emerging role of RNA modifications in the regulation of mRNA stability DOI Creative Commons

Sung Ho Boo,

Yoon Ki Kim

Experimental & Molecular Medicine, Journal Year: 2020, Volume and Issue: 52(3), P. 400 - 408

Published: March 1, 2020

Many studies have highlighted the importance of tight regulation mRNA stability in control gene expression. largely depends on nucleotide sequence, which affects secondary and tertiary structures mRNAs, accessibility various RNA-binding proteins to mRNAs. Recent advances high-throughput RNA-sequencing techniques resulted elucidation important roles played by modifications sequences regulating stability. To date, hundreds different RNA been characterized. Among them, several modifications, including N

Language: Английский

Citations

426

Cross-talk of four types of RNA modification writers defines tumor microenvironment and pharmacogenomic landscape in colorectal cancer DOI Creative Commons
Huifang Chen, Jiameng Yao, Rujuan Bao

et al.

Molecular Cancer, Journal Year: 2021, Volume and Issue: 20(1)

Published: Feb. 8, 2021

The four major RNA adenosine modifications, i.e., m

Language: Английский

Citations

184

Immune Sensing Mechanisms that Discriminate Self from Altered Self and Foreign Nucleic Acids DOI Creative Commons
Eva Bartok, Gunther Hartmann

Immunity, Journal Year: 2020, Volume and Issue: 53(1), P. 54 - 77

Published: July 1, 2020

Language: Английский

Citations

152

Ribosome biogenesis in disease: new players and therapeutic targets DOI Creative Commons

Lijuan Jiao,

Yuzhe Liu, Xiyong Yu

et al.

Signal Transduction and Targeted Therapy, Journal Year: 2023, Volume and Issue: 8(1)

Published: Jan. 9, 2023

Abstract The ribosome is a multi-unit complex that translates mRNA into protein. Ribosome biogenesis the process generates ribosomes and plays an essential role in cell proliferation, differentiation, apoptosis, development, transformation. mTORC1, Myc, noncoding RNA signaling pathways are primary mediators work jointly with polymerases proteins to control protein synthesis. Activation of mTORC1 required for normal fetal growth development tissue regeneration after birth. Myc implicated cancer by enhancing Pol II activity, leading uncontrolled growth. deregulation RNAs such as microRNAs, long RNAs, circular involved developing blood, neurodegenerative diseases, atherosclerosis. We review similarities differences between eukaryotic bacterial molecular mechanism ribosome-targeting antibiotics resistance. also most recent findings dysfunction COVID-19 other conditions discuss consequences frameshifting, ribosome-stalling, ribosome-collision. summarize various diseases. Furthermore, we current clinical trials, prospective vaccines COVID-19, therapies targeting cancer, cardiovascular disease, aging, disease.

Language: Английский

Citations

147

Regulation and functions of non-m6A mRNA modifications DOI

Hanxiao Sun,

Kai Li,

Cong Liu

et al.

Nature Reviews Molecular Cell Biology, Journal Year: 2023, Volume and Issue: 24(10), P. 714 - 731

Published: June 27, 2023

Language: Английский

Citations

138

Genetic and epigenetic defects of the RNA modification machinery in cancer DOI Creative Commons
Ines Oršolić,

Arnaud Carrier,

Manel Esteller

et al.

Trends in Genetics, Journal Year: 2022, Volume and Issue: 39(1), P. 74 - 88

Published: Nov. 12, 2022

Cancer was initially considered to be an exclusively genetic disease, but interplay of dysregulated and epigenetic mechanisms is now known contribute the cancer phenotype. More recently, chemical modifications RNA molecules - so-called epitranscriptome have been found regulate various aspects function homeostasis. Specific enzymes, as RNA-modifying proteins (RMPs), are responsible for depositing, removing, reading in RNA. Intensive investigations epitranscriptomic field recent years, conjunction with great technological advances, revealed critical role regulating numerous cellular pathways. Furthermore, growing evidence has that modification machinery often altered human cancers, highlighting enormous potential RMPs pharmacological targets or diagnostic markers.

Language: Английский

Citations

81

Small RNA modifications: regulatory molecules and potential applications DOI Creative Commons
Qunli Xiong, Yaguang Zhang

Journal of Hematology & Oncology, Journal Year: 2023, Volume and Issue: 16(1)

Published: June 22, 2023

Abstract Small RNAs (also referred to as small noncoding RNAs, sncRNA) are defined polymeric ribonucleic acid molecules that less than 200 nucleotides in length and serve a variety of essential functions within cells. RNA species include microRNA (miRNA), PIWI-interacting (piRNA), interfering (siRNA), tRNA-derived (tsRNA), etc. Current evidence suggest can also have diverse modifications their nucleotide composition affect stability well capacity for nuclear export, these relevant drive molecular signaling processes biogenesis, cell proliferation differentiation. In this review, we highlight the characteristics cellular modifications, current techniques reliable detection. We discuss how may be clinical applications diagnosis treatment human health conditions such cancer.

Language: Английский

Citations

53

RNA methylations in human cancers DOI
Xiao Han, Mengke Wang, Yongliang Zhao

et al.

Seminars in Cancer Biology, Journal Year: 2020, Volume and Issue: 75, P. 97 - 115

Published: Nov. 19, 2020

Language: Английский

Citations

136

New Twists in Detecting mRNA Modification Dynamics DOI Creative Commons
Ina Anreiter, Quoseena Mir, Jared T. Simpson

et al.

Trends in biotechnology, Journal Year: 2020, Volume and Issue: 39(1), P. 72 - 89

Published: July 1, 2020

Language: Английский

Citations

134

Ribosome heterogeneity in stem cells and development DOI Creative Commons
Dan Li, Jianlong Wang

The Journal of Cell Biology, Journal Year: 2020, Volume and Issue: 219(6)

Published: April 7, 2020

Translation control is critical to regulate protein expression. By directly adjusting levels, cells can quickly respond dynamic transitions during stem cell differentiation and embryonic development. Ribosomes are multisubunit cellular assemblies that mediate translation. Previously seen as invariant machines with the same composition of components in all conditions, recent studies indicate ribosomes heterogeneous different ribosome types preferentially translate specific subsets mRNAs. Such heterogeneity specialized translation functions very important development, they allow stimuli through direct changes abundance. In this review, we discuss arises from multiple features rRNAs, including rRNA variants modifications, ribosomal proteins, their stoichiometry, compositions, paralogues, posttranslational modifications. We also alterations ribosome-associated proteins (RAPs), a particular focus on consequent translational

Language: Английский

Citations

91