International Journal of Molecular Sciences,
Journal Year:
2025,
Volume and Issue:
26(8), P. 3571 - 3571
Published: April 10, 2025
The
WOX
(WUSCHEL-related
homeobox)
gene
family
plays
pivotal
roles
in
plant
growth,
development,
and
responses
to
biotic/abiotic
stresses.
Flax
(Linum
usitatissimum
L.),
a
globally
important
oilseed
fiber
crop,
lacks
comprehensive
characterization
of
its
family.
Here,
18
LuWOX
genes
were
systematically
identified
the
flax
genome
through
bioinformatics
analyses.
Phylogenetic
classification
grouped
these
into
three
clades:
Ancient,
Intermediate,
WUS
Clades,
with
members
within
same
clade
exhibiting
conserved
exon–intron
structures
motif
compositions.
Promoter
analysis
revealed
abundant
cis-acting
elements
associated
hormone
(MeJA,
abscisic
acid)
abiotic
stress
adaptation
(anaerobic
induction,
drought,
low
temperature).
Segmental
duplication
events
(nine
pairs)
contributed
significantly
expansion.
Protein–protein
interaction
networks
implicated
several
proteins
stress-responsive
pathways.
Expression
profiling
demonstrated
that
most
highly
expressed
5-day-post-anthesis
(DPA)
flowers
embryonic
tissues.
qRT-PCR
validation
further
uncovered
distinct
expression
patterns
under
cold,
salt
This
study
established
foundational
framework
for
leveraging
enhance
tolerance
breeding
functional
genomics.
Plants,
Journal Year:
2024,
Volume and Issue:
13(21), P. 2962 - 2962
Published: Oct. 23, 2024
Drought,
a
significant
environmental
challenge,
presents
substantial
risk
to
worldwide
agriculture
and
the
security
of
food
supplies.
In
response,
plants
can
perceive
stimuli
from
their
environment
activate
defense
pathways
via
various
modulating
networks
cope
with
stress.
Drought
tolerance,
multifaceted
attribute,
be
dissected
into
distinct
contributing
mechanisms
factors.
Osmotic
stress,
dehydration
dysfunction
plasma
endosome
membranes,
loss
cellular
turgidity,
inhibition
metabolite
synthesis,
energy
depletion,
impaired
chloroplast
function,
oxidative
stress
are
among
most
critical
consequences
drought
on
plant
cells.
Understanding
intricate
interplay
these
physiological
molecular
responses
provides
insights
adaptive
strategies
employ
navigate
through
Plant
cells
express
withstand
reverse
effects
These
include
osmotic
adjustment
preserve
turgor,
synthesis
protective
proteins
like
dehydrins,
triggering
antioxidant
systems
counterbalance
A
better
understanding
tolerance
is
crucial
for
devising
specific
methods
improve
crop
resilience
promote
sustainable
agricultural
practices
in
environments
limited
water
resources.
This
review
explores
employed
by
address
challenges
Genes,
Journal Year:
2024,
Volume and Issue:
15(5), P. 573 - 573
Published: April 29, 2024
Salt
stress
has
a
detrimental
impact
on
food
crop
production,
with
its
severity
escalating
due
to
both
natural
and
man-made
factors.
As
one
of
the
most
important
crops,
wheat
is
susceptible
salt
stress,
resulting
in
abnormal
plant
growth
reduced
yields;
therefore,
damage
from
should
be
great
concern.
Additionally,
utilization
land
coastal
areas
warrants
increased
attention,
given
diminishing
supplies
fresh
water
arable
land,
demand
for
wheat.
A
comprehensive
understanding
physiological
molecular
changes
under
can
offer
insights
into
mitigating
adverse
effects
In
this
review,
we
summarized
genes
mechanisms
involved
ion
transport,
signal
transduction,
enzyme
hormone
regulation,
response
based
processes
Then,
surveyed
latest
progress
improving
tolerance
through
breeding,
exogenous
applications,
microbial
pathways.
Breeding
efficiency
improved
combination
gene
editing
multiple
omics
techniques,
which
fundamental
strategy
dealing
stress.
Possible
challenges
prospects
process
were
also
discussed.
Plants
are
subjected
to
abiotic
stresses
throughout
their
developmental
period.
Abiotic
include
drought,
salt,
heat,
cold,
heavy
metals,
nutritional
element
and
oxidative
stresses.
Improving
plant
response
various
environmental
is
critical
for
survival
perpetuation.
The
WRKY
transcription
factors
have
special
structure
(WRKY
structural
domains),
which
enable
different
transcriptional
regulatory
functions.
can
not
only
regulate
growth
development
by
regulating
phytohormone
signalling
pathways,
but
also
promote
or
suppress
the
expression
of
downstream
genes
binding
W-box
[TGACCA/TGACCT]
in
promoters
target
genes.
In
addition,
interact
with
other
families
defence
responses
stresses,
self-regulate
recognizing
W-boxes
own
However,
recent
years,
research
reviews
on
roles
higher
plants
scarce
shallow.
this
review,
we
focus
classification
factors,
as
well
identification
molecular
mechanisms
involved
improve
tolerance
ability
stress
look
forward
future
directions,
a
view
providing
theoretical
support
genetic
improvement
crop
tolerance.
International Journal of Molecular Sciences,
Journal Year:
2024,
Volume and Issue:
25(13), P. 6845 - 6845
Published: June 21, 2024
Plants
are
subjected
to
abiotic
stresses
throughout
their
developmental
period.
Abiotic
include
drought,
salt,
heat,
cold,
heavy
metals,
nutritional
elements,
and
oxidative
stresses.
Improving
plant
responses
various
environmental
is
critical
for
survival
perpetuation.
WRKY
transcription
factors
have
special
structures
(WRKY
structural
domains),
which
enable
the
different
transcriptional
regulatory
functions.
can
not
only
regulate
stress
growth
development
by
regulating
phytohormone
signalling
pathways
but
also
promote
or
suppress
expression
of
downstream
genes
binding
W-box
[TGACCA/TGACCT]
in
promoters
target
genes.
In
addition,
interact
with
other
families
defence
self-regulate
recognising
W-boxes
own
However,
recent
years,
research
reviews
on
roles
higher
plants
been
scarce
shallow.
this
review,
we
focus
structure
classification
factors,
as
well
identification
molecular
mechanisms
involved
response
stresses,
improve
tolerance
ability
under
stress,
look
forward
future
directions,
a
view
providing
theoretical
support
genetic
improvement
crop
tolerance.
Frontiers in Plant Science,
Journal Year:
2025,
Volume and Issue:
16
Published: Jan. 31, 2025
As
soil
becomes
more
acidic,
aluminum
toxicity
has
emerged
as
a
key
issue
impacting
seed
germination
and
crop
productivity
in
such
environments.
Therefore,
it
is
urgent
to
investigate
the
mechanism
of
influence
stress
on
germination.
In
this
study,
we
focused
one
major
bioenergy
crops-rapeseed.
Seeds
aluminum-sensitive
(S)
aluminum-resistant
(R)
lines
screened
from
recombinant
inbred
(RILs)
population
rapeseed
were
treated
with
80
µg·ml-1
AlCl3
(ST,
RT).
Purified
water
served
control
(SC,
RC).
On
3rd,
5th,
7th
day
after
treatment,
root
tissue
was
collected
for
transcriptome
sequencing.
Utilizing
MapMan
software,
genes
showing
differential
expression
S
R
assigned
signaling
pathway,
resulting
identification
1036
genes.
By
weighted
gene
co-expression
network
analysis
(WGCNA),
five
co-expressed
modules
associated
discovered.
A
total
332
candidate
by
combining
related
signal
transduction
pathways
module
hub
Among
them,
26
located
quantitative
trait
loci
(QTL)
confidence
intervals
germination-related
traits
under
stress,
primarily
distributed
11
QTL
regions,
qRDW-A09-1,
qRDW-A10-1
qRGV-A01-2,
they
relative
length
(RRL),
dry
weight
(RDW),
vigor
(RGV)
bud
(RBL).
The
roles
included
transcription
regulation,
protein
production,
redox
processes,
hormone
signaling,
cell
wall
alteration,
calcium-based
transmission.
Compared
line,
line
exhibited
quicker
stronger
activation
transduction,
suggesting
that
responsive
stress.
This
research
offers
an
empirical
basis
identifying
varieties
investigating
molecular
regulation
tolerance
during
Plants,
Journal Year:
2025,
Volume and Issue:
14(4), P. 593 - 593
Published: Feb. 15, 2025
As
an
ornamentally
and
medicinally
worthy
plant,
Hosta
plantaginea
(Lam.)
Aschers.
has
the
adapted
capacity
to
survive
cold
temperate
monsoon
climates
in
Northeastern
China.
However,
its
use
is
limited
by
soil
alkalization
of
urban
gardens.
Our
pre-experiment
found
that
‘Golden
Cadet’
potential
be
alkali-tolerant.
Hence,
tissue-cultured
seedlings
were
used
as
experimental
material.
Its
related
growth,
physiology,
transcripts
examined
reveal
molecular
mechanism
response
alkali
stress.
The
results
show
development
was
affected
In
comparison
with
control,
malondialdehyde
(MDA)
content
increased
4.28-fold
at
24th
hour,
superoxide
dismutase
(SOD)
activity
49%
6th
peroxidase
(POD)
soluble
sugar
(SS)
67%
30%
12th
respectively.
RNA-seq
analysis
revealed
gene
expressions
0
h,
6
12
21
h
48
differed
after
200
mmol/L
NaHCO3
treatment.
During
under
stress,
2366
differentially
expressed
genes
found.
transcription
factors
MYB,
AP2/ERF,
WRKY
activated
genes.
KEGG
phytohormone
signaling
pathways,
starch
sucrose
metabolism,
phenylpropane
production
summary,
can
reduce
membrane
damage
improving
osmoregulation
antioxidant
capacity,
increase
regulate
biosynthesis
activating
inducing
signaling,
mitigating
effects
toxicity.
These
findings
guide
investigation
into
tolerance
plants,
screening
genes,
selecting
breeding
novel
alkali-tolerant
cultivars.
Forests,
Journal Year:
2024,
Volume and Issue:
15(4), P. 697 - 697
Published: April 13, 2024
The
AP2/ERF
gene
family,
referring
to
an
exclusive
class
of
transcription
factors
unique
plants,
is
involved
in
various
biological
processes,
including
plant
growth
and
responses
environmental
stresses
like
high
salt
drought.
In
this
study,
the
M.
notabilis
was
comprehensively
identified
bioinformatically
analyzed
based
on
genomic
data
notabilis.
106
members
MnAP2/ERF
family
were
genome
categorized
into
five
subfamilies:
ERF,
AP2,
DREB,
RAV,
Soloist,
with
ERF
subfamily
representing
80.19%
total.
observed
be
distributed
six
chromosomes
Members
exhibited
obvious
differences
amino
acid
number,
molecular
weight,
isoelectric
point,
other
properties.
Approximately
68.87%
proteins
acidic,
all
exhibiting
hydrophilic
characteristics.
Differences
conserved
sequences
arrangement
AP2
domains
among
distinct
subfamilies,
genes
same
sharing
similar
domain
compositions.
There
47
without
untranslated
regions
44
two
regions.
upstream
functions
promoters
concentrated
light
reactions
hormones.
Evolutionarily,
significant
structural
identified,
28
could
interact
each
other.
Moreover,
35
22
fragment
repeat
events,
55
84
AtAP2/ERF
showed
collinearity.
expression
significantly
different
parts,
indicating
that
these
physiological
activities.
These
results
established
a
theoretical
foundation
for
investigating
functional
evolutionary
aspects
notabilis,
as
well
exploring
root
morphogenesis
Additionally,
study
contributes
basis
improvement
cultivar
stress
resistance
Frontiers in Plant Science,
Journal Year:
2025,
Volume and Issue:
15
Published: Jan. 14, 2025
Citrus
tristeza
virus
(CTV)
is
a
threat
to
the
citrus
production
and
causes
severe
economic
losses
industry.
Ethylene
response
factors
(ERFs)
play
important
roles
in
plant
growth
stress
responses.
Although
ERF
genes
have
been
widely
studied
model
plants,
little
known
about
their
role
biological
responses
fruit
trees,
such
as
citrus.
CsERF1
belongs
AP2/ERF
transcription
factor
family.
To
determine
of
on
CTV
resistance
effects
exongenous
hormone
application
citrus,
expression
related
was
quantitatively
analyzed
by
quantitative
reverse
polymerase
chain
reaction
(RT-qPCR)
this
study.
The
profile
showed
that
level
roots
significantly
lower
under
infection
than
healthy
while
stems
increased.
responded
exogenous
salicylic
acid
(SA)
methyl
jasmonate
(MeJA)
treatments.
titer
RNAi-CsERF1
transgenic
sweet
orange
plants
Furthermore,
CsERF1-overexpressing
exhibited
differential
involved
jasmonic
(JA)
SA
signaling.
These
results
suggest
mediates
regulating
JA
signaling
pathways.
study
provide
new
clues
defence
against
CTV.
It
great
significance
create
germplasm
resources
resistant
recession
disease.