A gap-free genome assembly of Fusarium oxysporum f. sp. conglutinans, a vascular wilt pathogen DOI Creative Commons
Huan Wang, Gang Yao, Weikai Chen

et al.

Scientific Data, Journal Year: 2024, Volume and Issue: 11(1)

Published: Aug. 27, 2024

Fusarium oxysporum is an asexual filamentous fungus that causes vascular wilt in hundreds of crop plants and poses a threat to public health through Fusariosis. F. f. sp. conglutinans strain Fo5176, originally isolated from Brassica oleracea, pathogenic Arabidopsis, making it model pathosystem for dissecting the molecular mechanisms underlying host-pathogen interactions. Assembling genome notoriously challenging due presence repeat-rich accessory chromosomes. Here, we report gap-free assembly Fo5176 using PacBio HiFi Hi-C data. The 69.56 Mb contained 18 complete chromosomes, including all centromeres most telomeres (20/36), representing first sequence strain. In total, 21,460 protein-coding genes were annotated, 26.3% increase compared recent assembly. This high-quality reference provides valuable resource further research into fungal pathobiology evolution.

Language: Английский

What are the 100 most cited fungal genera? DOI

C.S. Bhunjun,

Yijun Chen, Chayanard Phukhamsakda

et al.

Studies in Mycology, Journal Year: 2024, Volume and Issue: unknown

Published: Jan. 1, 2024

Language: Английский

Citations

23

Profile of Bionectriaceae, Calcarisporiaceae, Hypocreaceae, Nectriaceae, Tilachlidiaceae, Ijuhyaceae fam. nov., Stromatonectriaceae fam. nov. and Xanthonectriaceae fam. nov DOI
Rekhani H. Perera, Kevin D. Hyde, E.B. Gareth Jones

et al.

Fungal Diversity, Journal Year: 2023, Volume and Issue: 118(1), P. 95 - 271

Published: Jan. 1, 2023

Language: Английский

Citations

34

Secondary metabolites of Alternaria: A comprehensive review of chemical diversity and pharmacological properties DOI Creative Commons
Shiqin Zhao, Juan Li, Jinping Liu

et al.

Frontiers in Microbiology, Journal Year: 2023, Volume and Issue: 13

Published: Jan. 6, 2023

Fungi are considered to be one of the wealthiest sources bio-metabolites that can employed for yielding novel biomedical agents. Alternaria , including parasitic, saprophytic, and endophytic species, is a kind dark fungi produce broad array secondary metabolites (SMs) widely distributed in many ecosystems. These categorized into polyketides, nitrogen-containing compounds, quinones, terpenes, others based on unique structural features metabolites. New natural products derived from exhibit excellent bioactivities characterized by antibacterial, antitumor, antioxidative, phytotoxic, enzyme inhibitory properties. Thus, species significantly meaningful pharmaceutical, industrial, biotechnological, medicinal applications. To update catalog synthesized fungi, 216 newly described isolated were summarized with their diverse chemical structures, pharmacological activity, possible biosynthetic pathway. In addition, insights, avenues, challenges future research development discussed.

Language: Английский

Citations

25

Trans-kingdom sRNA silencing in the prevention and control of crop Fusarium wilt disease DOI Creative Commons

Xinmin Huang,

Yueqi Wang, Yanting Li

et al.

Phytopathology Research, Journal Year: 2025, Volume and Issue: 7(1)

Published: Jan. 17, 2025

Abstract The Fusarium oxysporum species complex (FOSC), comprising a multitude of soil borne fungal pathogens, represent major group plant invaders that cause vascular wilt diseases crops worldwide. Although sexual reproduction is nebulous in the FOSC, horizontal gene transfer (also well known as trans-kingdom) may contribute to observed diversity pathogenic strains. Concerning safety and costly process generating genetically modified crops, plant-disease management strategy not reliant on transgenic approaches remains most economic environmental-friendly option. Here, we highlight current scenario via beginning with F. formae speciales races caused disease field. Subsequently, based mechanisms by which small RNA (sRNA) acts silencing, especially bidirectionally trans-kingdom sRNA silencing between their hosts development disease, summarize technological breakthroughs like Spray-Induced Gene Silencing (SIGS) technology developing applying protect from disease. Given SIGS has been developed recently applied controlling crop diseases, propose potential prevention control system exploit -vasculature interaction leading further study silencing.

Language: Английский

Citations

1

Secondary Metabolites, Biological Activities, and Industrial and Biotechnological Importance of Aspergillus sydowii DOI Creative Commons
Sabrin R. M. Ibrahim, Shaimaa G. A. Mohamed,

Baiaan H. AlSaadi

et al.

Marine Drugs, Journal Year: 2023, Volume and Issue: 21(8), P. 441 - 441

Published: Aug. 5, 2023

Marine-derived fungi are renowned as a source of astonishingly significant and synthetically appealing metabolites that proven new lead chemicals for chemical, pharmaceutical, agricultural fields.

Language: Английский

Citations

20

The control of Fusarium growth and decontamination of produced mycotoxins by lactic acid bacteria DOI
Slim Smaoui, Sofia Agriopoulou, Teresa D’Amore

et al.

Critical Reviews in Food Science and Nutrition, Journal Year: 2022, Volume and Issue: 63(32), P. 11125 - 11152

Published: June 16, 2022

Global crop and food contamination with mycotoxins are one of the primary worldwide concerns, while there several restrictions regarding approaching conventional physical chemical decontamination methods due to nutrition loss, sensory attribute reduction in foods, residual, inconvenient operation, high cost equipment, energy consumption some methods. In this regard, overarching challenges mycotoxin crops require development biological strategies. Using certain lactic acid bacteria (LAB) as generally recognized safe (GRAS) compounds is most effective alternatives their potential release antifungal metabolites against various fungal factors species. This review highlights applications LAB biodetoxificant agents summarizes activities Fusarium growth released into food/feed. Firstly, occurrence instrumental bioanalytical for analysis were in-depth discussed. Upgraded knowledge on biosynthesis pathway produced by offers new insightful ideas clarifying function these secondary metabolites. Moreover, characterization impact from Fusarium, besides main mechanisms decontamination, covered. While thematic inhibition very complex, worth deeper investigations.

Language: Английский

Citations

27

Chaetomugilins and Chaetoviridins—Promising Natural Metabolites: Structures, Separation, Characterization, Biosynthesis, Bioactivities, Molecular Docking, and Molecular Dynamics DOI Creative Commons
Abdelsattar M. Omar, Gamal A. Mohamed, Sabrin R. M. Ibrahim

et al.

Journal of Fungi, Journal Year: 2022, Volume and Issue: 8(2), P. 127 - 127

Published: Jan. 27, 2022

Fungi are recognized as luxuriant metabolic artists that generate propitious biometabolites. Historically, fungal metabolites have largely been investigated leads for various therapeutic agents. Chaetomugilins and the closely related chaetoviridins metabolites, each has an oxygenated bicyclic pyranoquinone core. They mainly produced by Chaetomaceae species. These display unique chemical features diversified bioactivities. The current review gives overview of research about chaetomugilins regarding their structures, separation, characterization, biosynthesis, Additionally, antiviral potential towards SARS-CoV-2 protease was evaluated using docking studies molecular dynamics (MD) simulations. We report on predictive binding energy estimations reported crystal structures main (PDB ID: 6M2N, 6W81, 7K0f) at variable resolutions—i.e., 2.20, 1.55, 1.65 Å, respectively. Chaetovirdin D (43) exhibited highly negative scores −7.944, −8.141, −6.615 kcal/mol, when complexed with 7K0f, reference inhibitors following scores: −5.377, −6.995, −8.159 By simulations, chaetovirdin D’s stability in complexes viral analyzed, it found to be stable over course 100 ns.

Language: Английский

Citations

24

Stachybotrys chartarum—A Hidden Treasure: Secondary Metabolites, Bioactivities, and Biotechnological Relevance DOI Creative Commons
Sabrin R. M. Ibrahim, Hani Choudhry, Amer H. Asseri

et al.

Journal of Fungi, Journal Year: 2022, Volume and Issue: 8(5), P. 504 - 504

Published: May 12, 2022

Fungi are renowned as a fountainhead of bio-metabolites that could be employed for producing novel therapeutic agents, well enzymes with wide biotechnological and industrial applications. Stachybotrys chartarum (black mold) (Stachybotriaceae) is toxigenic fungus commonly found in damp environments. This has the capacity to produce various classes unrivaled structural features, including cyclosporins, cochlioquinones, atranones, trichothecenes, dolabellanes, phenylspirodrimanes, xanthones, isoindoline chromene derivatives. Moreover, it source have variable relevance. The current review highlights formerly published data on S. chartarum, its metabolites their bioactivities, relevance dated from 1973 beginning 2022. In this work, 215 been listed 138 references cited.

Language: Английский

Citations

24

Mycosynthesis of selenium nanoparticles using Penicillium tardochrysogenum as a therapeutic agent and their combination with infrared irradiation against Ehrlich carcinoma DOI Creative Commons

Abeer I. M. EL‐Sayed,

Mostafa M. El‐Sheekh, Sahar E. Abo‐Neima

et al.

Scientific Reports, Journal Year: 2024, Volume and Issue: 14(1)

Published: Jan. 31, 2024

Over the past years, assessment of myco-fabricated selenium nanoparticles (SeNPs) properties, is still in its infancy. Herein, we have highly stable myco-synthesized SeNPs using molecularly identified soil-isolated fungus; Penicillium tardochrysogenum OR059437; (PeSeNPs) were clarified via TEM, EDX, UV-Vis spectrophotometer, FTIR and zeta potential. The therapeutic efficacy profile will be determined, these crystalline PeSeNPs examined for antioxidant, antimicrobial, MIC, anticancer potentials, indicating that, antioxidant activity (IC

Language: Английский

Citations

6

Mycosynthesis of highly fluorescent selenium nanoparticles from Fusarium oxysporum, their antifungal activity against black fungus Aspergillus niger, and in-vivo biodistribution studies DOI Open Access
Sk Najrul Islam,

Syed Mohd Adnan Naqvi,

Azam Raza

et al.

3 Biotech, Journal Year: 2022, Volume and Issue: 12(11)

Published: Oct. 5, 2022

Language: Английский

Citations

20