Metazoan Diversity and Its Drivers: An eDNA Survey in the Pacific Gateway of a Changing Arctic Ocean
Environmental DNA,
Journal Year:
2025,
Volume and Issue:
7(2)
Published: March 1, 2025
ABSTRACT
Climate
change
drives
species
to
adapt
or
undergo
range
shifts
survive.
The
Arctic
Ocean,
experiencing
more
drastic
environmental
changes
than
any
other
ocean,
has
two
primary
inflow
regions
that
facilitate
these
shifts:
the
wide,
deep
Atlantic
Gateway
and
narrow,
shallow
Pacific
Gateway.
Environmental
DNA
(eDNA)
surveys
have
proven
be
effective
in
characterizing
community
composition
understanding
its
ecological
drivers.
We
conducted
first
COI
marker‐based
eDNA
survey
analyzed
seawater
samples
from
various
geographic
regions,
depths,
water
masses
across
Bering
Strait,
Chukchi
Sea,
South
Beaufort
Sea.
Metazoan
taxa
15
different
phyla
indicator
for
were
identified.
characterized
a
highly
diverse
neritic
fauna
Strait
aligning
with
known
locations
of
benthic
hotspots.
On
slope
we
observed
transitions
copepod‐dominated
epipelagic
waters
cnidarian‐
sponge‐dominated
deeper
areas.
Alpha
diversity
peaked
near
seabed
coastlines
was
highest
within
warmest
Alaskan
Coastal
Water
mass.
linked
metazoan
communities
variables,
being
associated
higher
temperatures
fluorescence,
majority
them
lower
salinities.
This
included
mostly
Pseudocalanus
copepod
verongiid
sponges.
While
rising
might
enhance
alpha
diversity,
anticipate
this
will
primarily
due
influx
warmer
fresher
masses.
Several
taxa,
including
bivalve
Macoma
calcarea
seastar
Leptasterias
arctica
,
as
well
jellyfish
Chrysaora
melanaster
Triconia
borealis
colder,
saltier
likely
negatively
impacted
by
ongoing
change.
Our
study
successfully
rapidly
changing
Ocean.
Language: Английский
Long-Term Biophysical Observations and Climate Impacts in US Arctic Marine Ecosystems
Oceanography,
Journal Year:
2023,
Volume and Issue:
unknown
Published: Jan. 1, 2023
In
1995,
the
first
of
a
nearly
continuous
sequence
biophysical
moorings
was
deployed
at
site
(M2)
on
southeastern
Bering
Sea
shelf.
Over
next
15
years,
10
additional
mooring
sites
were
initiated.
The
resultant
long-term
array
extends
over
1,800
km
from
southern
to
northern
Chukchi
Sea,
covering
most
US
Arctic.
It
provides
full
range
oceanographic
data
for
researchers,
stakeholders,
and
managers.
addition,
these
sets
have
been
critical
validation
regional
ocean
models.
temperature
quantified
warming
formed
basis
understanding
how
warmer
temperatures
loss
sea
ice
are
modifying
high-latitude
marine
ecosystems.
Changes
observed
in
context
observations
program
include
delayed
spring
bloom,
low
abundances
large
crustacean
zooplankton
crab
species,
seabird
die-offs,
changes
acidification,
northward
expansion
subarctic
fish
shifts
ranges
mammal
species.
Language: Английский
Stratification and summer protist communities in the Arctic influenced coastal systems of Nunavik (Québec, Canada)
Frontiers in Marine Science,
Journal Year:
2024,
Volume and Issue:
11
Published: Jan. 29, 2024
Phytoplankton
and
other
protists
in
the
3
µm
to
50
size
fraction
are
grazed
on
by
zooplankton
form
base
of
Arctic
marine
food
webs
essential
for
local
indigenous
communities.
Anthropogenic
climate
change
is
increasing
stratification
over
much
Ocean
surrounding
seas,
but
influence
protist
communities
more
coastal
regions
along
Eastern
Hudson
Bay,
Strait
Ungava
Bay
little
known.
We
used
18S
rRNA
rDNA
amplicon
sequencing
during
two
consecutive
summers
(2017
2018)
detailed
water
column
properties
compare
under
contrasting
regimes
Complex.
found
that
surface
mixed
layer
which
river
runoff,
was
strongly
stratified
dominated
mixotrophic
bacterivorous
taxa,
mostly
dinoflagellates
Heterocapsa
rotundata
Gymnodiniales
spp.,
a
diatom-dominated
community
at
Subsurface
Chlorophyll
Maximum
(SCM),
persisted
deeper
colder
saline
water.
The
massive
effort
retrieved
seven
putative
toxic
algae
from
upper
warmer
waters
eastern
Bay.
These
included
Pseudo-nitzschia
spp.
potentially
harmful
dinoflagellates,
most
notably
Alexandrium
sp.
persistent
weaker
conditions
summer
favored
different
diatom
community,
Chaetoceros
Thalassiosira
small
photosynthetic
flagellates
including
Phaeocystis
pouchetii
Micromonas
polaris
.
As
freshwater
input
increases
intensifies
Arctic,
our
findings
suggest
dinoflagellate-based
seen
may
also
be
receiving
increased
runoff.
could
favor
algal
events.
were
nearer
consisted
diverse
species
able
profit
ongoing
nutrient
due
tidal
mixing.
results
greater
resilience
this
tidally
influenced
Bays
lacking
larger
rivers
inputs.
Language: Английский
REVAMP: Rapid Exploration and Visualization through an Automated Metabarcoding Pipeline
Sean M. McAllister,
No information about this author
Christopher Paight,
No information about this author
Emily Norton
No information about this author
et al.
Oceanography,
Journal Year:
2023,
Volume and Issue:
unknown
Published: Jan. 1, 2023
The
revolution
and
acceleration
in
DNA
sequencing
over
the
past
three
decades
has
driven
development
of
new
biomolecular
tools
like
environmental
(eDNA)
metabarcoding
for
characterizing
marine
biodiversity.
In
order
to
operationalize
eDNA
approaches
routine
NOAA
observatories,
bioinformatic
programs
improved
organismal
reference
barcodes
are
needed
serve
accurate
reliable
biological
data
a
timely
manner.
To
address
these
needs,
we
present
Rapid
Exploration
Visualization
through
an
Automated
Metabarcoding
Pipeline
(REVAMP),
which
provides
streamlined
end-to-end
processing
from
raw
reads
exploration,
visualization,
hypothesis
generation.
One
benefit
REVAMP
is
ability
iteratively
assess
marker
gene
database
performance.
Here,
used
filtered
that
only
included
sequences
uploaded
prior
specified
date
cutoffs
1995
2022
analyze
changes
taxonomic
assignments,
revealing
patterns
uneven
improvement
assignment
depth
accuracy
across
time,
region,
sets.
This
work
highlights
need
targeted
efforts
key
regional
taxa
importance
such
improving
biomonitoring
future.
Language: Английский
The History and Evolution of PMEL: Purposeful Research that Impacts Environmental Policy
Oceanography,
Journal Year:
2023,
Volume and Issue:
unknown
Published: Jan. 1, 2023
The
Pacific
Marine
Environmental
Laboratory
(PMEL)
conducts
global
and
regional
oceanographic
research
in
support
of
the
National
Oceanic
Atmospheric
Administration’s
(NOAA’s)
three
mission
areas:
(1)
understanding
predicting
changes
climate,
weather,
oceans,
coasts;
(2)
sharing
that
knowledge
with
others;
(3)
conserving
managing
coastal
marine
ecosystems
resources.
Since
its
establishment
1973,
PMEL’s
work
has
ranged
from
pole
to
across
ocean.
lab’s
examined
ocean
structure
function
physical,
chemical,
biological
realms,
informed
supported
development
US
policy
these
areas.
Language: Английский