arXiv (Cornell University),
Journal Year:
2023,
Volume and Issue:
unknown
Published: Jan. 1, 2023
Rapid
mapping
of
the
mechanical
properties
soft
biological
tissues
from
light
microscopy
to
macroscopic
imaging
could
transform
fundamental
biophysical
research
by
providing
clinical
biomarkers
complement
in
vivo
elastography.
We
here
introduce
superfast
optical
time-harmonic
elastography
(OTHE)
remotely
encode
surface
and
subsurface
shear
wave
fields
for
generating
maps
tissue
stiffness
with
unprecedented
detail
resolution.
OTHE
rigorously
exploits
space-time
propagation
characteristics
waves
address
current
limitations
biomechanical
Key
solutions
are
presented
stimulation,
encoding,
reconstruction
time-harmonic,
multifrequency
waves,
all
tuned
provide
consistent
values
across
resolutions
microns
millimeters.
OTHE's
versatility
is
demonstrated
Bacillus
subtilis
biofilms,
zebrafish
embryos,
adult
zebrafish,
human
skeletal
muscle,
reflecting
diversity
phylogenetic
tree
a
mechanics
perspective.
By
zooming
on
details
coarse
finer
scales,
advances
developmental
biology
offers
way
perform
biomechanics-based
histology
that
consistently
matches
patients.
Biophysical Reviews,
Journal Year:
2025,
Volume and Issue:
unknown
Published: March 4, 2025
Abstract
Bacterial
communication
is
essential
for
survival,
adaptation,
and
collective
behavior.
While
chemical
signaling,
such
as
quorum
sensing,
has
been
extensively
studied,
physical
cues
play
a
significant
role
in
bacterial
interactions.
This
review
explores
the
diverse
range
of
stimuli,
including
mechanical
forces,
electromagnetic
fields,
temperature,
acoustic
vibrations,
light
that
bacteria
may
experience
with
their
environment
within
community.
By
integrating
these
pathways,
can
coordinate
activities
adapt
to
changing
environmental
conditions.
Furthermore,
we
discuss
how
stimuli
modulate
growth,
lifestyle,
motility,
biofilm
formation.
understanding
underlying
mechanisms,
develop
innovative
strategies
combat
infections
optimize
industrial
processes.
FEMS Microbiology Reviews,
Journal Year:
2024,
Volume and Issue:
48(2)
Published: Feb. 28, 2024
Abstract
Microbiomes
are
foundational
components
of
the
environment
that
provide
essential
services
relating
to
food
security,
carbon
sequestration,
human
health,
and
overall
well-being
ecosystems.
Microbiota
exert
their
effects
primarily
through
complex
interactions
at
interfaces
with
plant,
animal,
hosts,
as
well
within
soil
environment.
This
review
aims
explore
ecological,
evolutionary,
molecular
processes
governing
establishment
function
microbiome–host
relationships,
specifically
critical
One
Health—a
transdisciplinary
framework
recognizes
health
outcomes
people,
animals,
plants,
tightly
interconnected.
Within
context
Health,
core
principles
underpinning
microbiome
assembly
will
be
discussed
in
detail,
including
biofilm
formation,
microbial
recruitment
strategies,
mechanisms
attachment,
community
succession,
effect
these
have
on
host
health.
Finally,
this
catalogue
recent
advances
microbiology
ecology
methods
can
used
profile
interfaces,
particular
attention
multi-omic,
advanced
imaging,
modelling
approaches.
These
technologies
for
delineating
general
specific
functions,
mapping
interconnectivity
across
varying
spatial
temporal
scales,
predictive
frameworks
guide
development
targeted
microbiome-interventions
deliver
Health
outcomes.
APL Bioengineering,
Journal Year:
2025,
Volume and Issue:
9(1)
Published: Jan. 17, 2025
Many
cellular
functions
depend
on
the
physical
properties
of
cell's
environment.
bacteria
have
different
types
surface
appendages
to
enable
adhesion
and
motion
various
surfaces.
Myxococcus
xanthus
is
a
social
soil
bacterium
with
two
distinctly
regulated
modes
motility,
termed
motility
mode,
driven
by
type
IV
pili,
adventurous
based
focal
complexes.
How
sense
surfaces
subsequently
coordinate
their
collective
remains
largely
unclear.
Using
polyacrylamide
hydrogels
tunable
stiffness,
we
found
that
wild
M.
spreads
faster
stiffer
substrates.
Here,
show
using
mutants
disrupt
suppresses
this
substrate
stiffness
response,
suggesting
adhesion-based
dependent.
We
also
modifying
adding
adhesive
ligands,
chitosan,
increases
amount
flairs,
characteristic
feature
motility.
Taken
together,
hypothesize
central
role
as
driving
mechanism
for
sensing.
Microorganisms,
Journal Year:
2023,
Volume and Issue:
11(5), P. 1345 - 1345
Published: May 19, 2023
Pseudomonas
aeruginosa
causes
urinary
tract
infections
associated
with
catheters
by
forming
biofilms
on
the
surface
of
indwelling
catheters.
Therefore,
controlling
spread
bacteria
is
crucial
to
preventing
its
transmission
in
hospitals
and
environment.
Thus,
our
objective
was
determine
antibiotic
susceptibility
profiles
twenty-five
P.
isolates
from
UTIs
at
Medical
Center
Trás-os-Montes
Alto
Douro
(CHTMAD).
Biofilm
formation
motility
are
also
virulence
factors
studied
this
work.
Out
isolates,
16%
exhibited
multidrug
resistance,
being
resistant
least
three
classes
antibiotics.
However,
showed
a
high
prevalence
amikacin
tobramycin.
Resistance
carbapenem
antibiotics,
essential
for
treating
when
other
antibiotics
fail,
low
study,
Notably,
92%
demonstrated
intermediate
sensitivity
ciprofloxacin,
raising
concerns
about
efficacy
disease.
Genotypic
analysis
revealed
presence
various
β-lactamase
genes,
class
B
metallo-β-lactamases
(MBLs)
most
common.
The
blaNDM,
blaSPM,
blaVIM-VIM2
genes
were
detected
16%,
60%,
12%
strains,
respectively.
these
highlights
emerging
threat
MBL-mediated
resistance.
Additionally,
gene
varying
rates
among
strains.
exoU
gene,
cytotoxicity,
found
only
one
isolate,
while
such
as
exoS,
exoA,
exoY,
exoT
had
prevalence.
toxA
lasB
present
all
whereas
lasA
absent.
suggests
potential
strains
cause
severe
infections.
This
pathogen
proficiency
producing
biofilms,
be
capable
doing
so.
Currently,
resistance
serious
public
health
problems,
options
become
inadequate
continued
emergence
multidrug-resistant
combined
rate
biofilm
production
ease
dissemination.
In
conclusion,
study
provides
insights
into
isolated
human
urine
infections,
highlighting
need
surveillance
appropriate
therapeutic
approaches.
Biofilm,
Journal Year:
2023,
Volume and Issue:
5, P. 100109 - 100109
Published: Feb. 24, 2023
Astronauts
are
spending
longer
periods
locked
up
in
ships
or
stations
for
scientific
and
exploration
spatial
missions.
The
International
Space
Station
(ISS)
has
been
inhabited
continuously
more
than
20
years
the
duration
of
space
stays
by
crews
could
lengthen
with
objectives
human
presence
on
moon
Mars.
If
environment
these
habitats
is
designed
comfort
astronauts,
it
also
conducive
to
other
forms
life
such
as
embarked
microorganisms.
latter,
most
often
associated
surfaces
form
biofilm,
have
implicated
significant
degradation
functionality
pieces
equipment
habitats.
recent
research
suggests
that
microgravity
increase
persistence,
resistance
virulence
pathogenic
microorganisms
detected
communities,
endangering
health
astronauts
potentially
jeopardizing
long-duration
manned
In
this
review,
we
describe
mechanisms
dynamics
installation
propagation
microbial
communities
(spatial
migration),
well
long-term
processes
adaptation
evolution
extreme
environments
(phenotypic
genetic
special
reference
health.
We
discuss
means
control
envisaged
allow
a
lasting
cohabitation
between
vibrant
microscopic
passengers
astronauts.
In
the
wild,
bacteria
are
most
frequently
found
in
form
of
multicellular
structures
called
biofilms.
Biofilms
grow
at
surface
abiotic
and
living
materials
with
wide-ranging
mechanical
properties.
The
opportunistic
pathogen
Pseudomonas
aeruginosa
forms
biofilms
on
indwelling
medical
devices
soft
tissues,
including
burn
wounds
airway
mucosa.
Despite
critical
role
substrates
foundation
biofilms,
we
still
lack
a
clear
understanding
how
material
mechanics
regulate
their
architecture
physiology
resident
bacteria.
Here,
demonstrate
that
physical
properties
hydrogel
define
P.
biofilm
architecture.
We
show
mesh
size
regulates
twitching
motility,
exploration
mechanism
priming
ultimately
controlling
organization
single
cells
community.
resulting
architectural
transitions
increase
aeruginosa's
tolerance
to
colistin,
last-resort
antibiotic.
addition,
regulation
motility
affects
clonal
lineages,
so
more
mixed
relatively
denser
materials.
Our
results
thereby
establish
as
factor
dramatically
architecture,
antibiotic
efficacy,
evolution
population.
Biomedical Materials,
Journal Year:
2023,
Volume and Issue:
18(4), P. 045011 - 045011
Published: May 5, 2023
Although
cells
cultured
in
three-dimensional
(3D)
platforms
are
proven
to
be
beneficial
for
studying
cellular
behavior
settings
similar
their
physiological
state,
due
the
ease,
convenience,
and
accessibility,
traditional
2D
culturing
approaches
widely
adopted.
Jammed
microgels
a
promising
class
of
biomaterials
extensively
suited
3D
cell
culture,
tissue
bioengineering,
bioprinting.
However,
existing
protocols
fabricating
such
either
involve
complex
synthesis
steps,
long
preparation
times,
or
polyelectrolyte
hydrogel
formulations
that
sequester
ionic
elements
from
growth
media.
Hence,
there
is
an
unmet
need
broadly
biocompatible,
high-throughput,
easily
accessible
manufacturing
process.
We
address
these
demands
by
introducing
rapid,
remarkably
straightforward
method
synthesize
jammed
composed
flash-solidified
agarose
granules
directly
prepared
culture
medium
choice.
Our
media
optically
transparent,
porous,
yield
stress
materials
with
tunable
stiffness
self-healing
properties,
which
makes
them
ideal
as
well
The
charge-neutral
inert
nature
make
suitable
various
types
species,
specific
do
not
alter
chemistry
Unlike
several
platforms,
readily
compatible
standard
techniques
absorbance-based
assays,
antibiotic
selection,
RNA
extraction,
live
encapsulation.
In
effect,
we
present
versatile,
highly
accessible,
inexpensive,
adoptable
biomaterial
envision
widespread
application
just
routine
laboratory
but
also
designing
multicellular
mimics
dynamic
co-culture
models
niches.
Physical Review Letters,
Journal Year:
2025,
Volume and Issue:
134(8)
Published: Feb. 26, 2025
The
field
of
active
nematics
has
traditionally
employed
descriptions
based
on
dipolar
activity.
However,
it
is
theoretically
predicted
that
interactions
with
a
substrate,
prevalent
in
most
biological
systems,
lead
to
novel
forms
activity,
such
as
quadrupolar
are
governed
by
hydrodynamic
screening.
Here,
combining
experiments
and
numerical
simulations,
we
show
upon
light-induced
solidification
the
underlying
medium,
microtubule-kinesin
mixtures
undergo
transformation
leads
biphasic
suspension.
Using
an
lyotropic
model,
prove
transition
screening
effects
alter
dominant
form
stress.
Specifically,
combined
effect
friction
activity
hierarchical
folding
follows
intrinsic
bend
instability
nematic
layer.
Our
results
demonstrate
dynamics
collapse
orientational
order
present
new
route
for
controlling
matter
modifying
through
changing
surrounding
environment.