Airborne antibiotic resistome and human health risk in railway stations during COVID-19 pandemic DOI Creative Commons
Hong Bai,

Liang-Ying He,

Fang-Zhou Gao

и другие.

Environment International, Год журнала: 2023, Номер 172, С. 107784 - 107784

Опубликована: Янв. 30, 2023

Antimicrobial resistance is recognized as one of the greatest public health concerns. It becoming an increasingly threat during COVID-19 pandemic due to increasing usage antimicrobials, such antibiotics and disinfectants, in healthcare facilities or spaces. To explore characteristics airborne antibiotic resistome transport systems, we assessed distribution risks microbiome railway stations before after outbreak by culture-independent culture-dependent metagenomic analysis. Results showed that diversity genes (ARGs) decreased following pandemic, while relative abundance core ARGs increased. A total 159 horizontally acquired ARGs, predominantly confering macrolides aminoglycosides, were identified bacteria dust samples. Meanwhile, hosted pathogens increased pandemic. bloom clinically important (tigecycline meropenem) resistant was found outbreak. 251 high-quality metagenome-assembled genomes (MAGs) recovered from 27 metagenomes, 86 genera 125 species classified. Relative ARG-carrying MAGs, taxonomically assigned genus Bacillus, Pseudomonas, Acinetobacter, Staphylococcus, Bayesian source tracking estimated human skin anthropogenic activities presumptive sources for transit air. Moreover, risk assessment based on data revealed elevated

Язык: Английский

The spread of antibiotic resistance to humans and potential protection strategies DOI Creative Commons
Dong Ding, Bin Wang, Xiaoan Zhang

и другие.

Ecotoxicology and Environmental Safety, Год журнала: 2023, Номер 254, С. 114734 - 114734

Опубликована: Март 10, 2023

Antibiotic resistance is currently one of the greatest threats to human health. Widespread use and residues antibiotics in humans, animals, environment can exert selective pressure on antibiotic bacteria (ARB) gene (ARG), accelerating flow resistance. As ARG spreads population, burden humans increases, which may have potential health effects people. Therefore, it critical mitigate spread reduce load humans. This review briefly described information global consumption national action plans (NAPs) combat provided a set feasible control strategies for transmission ARB three areas including (a) Reducing colonization capacity exogenous ARB, (b) Enhancing mitigating horizontal transfer (HGT) ARG, (c) Reversing With hope achieving interdisciplinary one-health prevention bacterial

Язык: Английский

Процитировано

107

Metagenomics: An Effective Approach for Exploring Microbial Diversity and Functions DOI Creative Commons
Nguyễn Nhật Nam, Hoang Dang Khoa, Kieu The Loan Trinh

и другие.

Foods, Год журнала: 2023, Номер 12(11), С. 2140 - 2140

Опубликована: Май 25, 2023

Various fields have been identified in the "omics" era, such as genomics, proteomics, transcriptomics, metabolomics, phenomics, and metagenomics. Among these, metagenomics has enabled a significant increase discoveries related to microbial world. Newly discovered microbiomes different ecologies provide meaningful information on diversity functions of microorganisms Earth. Therefore, results metagenomic studies new microbe-based applications human health, agriculture, food industry, among others. This review summarizes fundamental procedures recent advances bioinformatic tools. It also explores up-to-date study, plant research, environmental sciences, other fields. Finally, is powerful tool for studying world, it still numerous that are currently hidden awaiting discovery. this discusses future perspectives

Язык: Английский

Процитировано

63

Recovering metagenome-assembled genomes from shotgun metagenomic sequencing data: Methods, applications, challenges, and opportunities DOI Creative Commons
Yunyan Zhou, Min Liu,

Jiawen Yang

и другие.

Microbiological Research, Год журнала: 2022, Номер 260, С. 127023 - 127023

Опубликована: Апрель 9, 2022

Язык: Английский

Процитировано

43

Airborne bacterial community and antibiotic resistome in the swine farming environment: Metagenomic insights into livestock relevance, pathogen hosts and public risks DOI Creative Commons
Fang-Zhou Gao,

Liang-Ying He,

Hong Bai

и другие.

Environment International, Год журнала: 2023, Номер 172, С. 107751 - 107751

Опубликована: Янв. 13, 2023

Globally extensive use of antibiotics has accelerated antimicrobial resistance (AMR) in the environment. As one biggest antibiotic consumers, livestock farms are hotspots AMR prevalence, especially those atmosphere can transmit over long distances and pose inhalation risks to public. Here, we collected total suspended particulates swine ambient air an intensive farming area. Bacterial communities resistomes were analyzed using amplicon metagenomic sequencing approaches. exposure potential human-pathogenic antibiotic-resistant bacteria (HPARB) subsequently estimated with comparison reported hospital samples. The results show that shaped airborne bacterial community by increasing abundances, reducing diversities shifting compositions. Swine feces contributed 77% farm air, about 35% air. Airborne mainly conferred tetracyclines, aminoglycosides lincosamides, 48% originated from feces. Distinct Firmicutes dominant environments conditional pathogens including Clostridium, Streptococcus Aerococcus being major hosts genes (ARGs). Therein, genomes S. alactolyticus carrying (transposase/recombinase-associated) ARGs virulence factor retrieved metagenomes all samples, but they not detected any This suggests indication hazards human health. faced higher than intake HPARB a worker was three orders magnitude person who works hospital. Consequently, this study depicted atmospheric transmission

Язык: Английский

Процитировано

32

Metagenomic surveillance of antibiotic resistome in influent and effluent of wastewater treatment plants located on the Qinghai-Tibetan Plateau DOI
Bin Shi, Renxin Zhao,

Guijin Su

и другие.

The Science of The Total Environment, Год журнала: 2023, Номер 870, С. 162031 - 162031

Опубликована: Фев. 4, 2023

Язык: Английский

Процитировано

28

Antibiotic-Induced Recruitment of Specific Algae-Associated Microbiome Enhances the Adaptability of Chlorella vulgaris to Antibiotic Stress and Incidence of Antibiotic Resistance DOI
Xue Xue,

Xiaoyue Su,

Linjun Zhou

и другие.

Environmental Science & Technology, Год журнала: 2023, Номер 57(36), С. 13336 - 13345

Опубликована: Авг. 29, 2023

Insights into the symbiotic relation between eukaryotic hosts and their microbiome lift curtain on crucial roles of microbes in host fitness, behavior, ecology. However, it remains unclear whether how abiotic stress shapes further affects adaptability. This study first investigated effect antibiotic exposure behavior across varying algae taxa at community level. Chlorophyta, particular Chlorella vulgaris, exhibited remarkable adaptability to stress, leading dominance phytoplankton communities. Accordingly, we isolated C. vulgaris strains compared growth axenic nonaxenic ones under conditions. The positive antibiotics algal were apparent only presence bacteria. Results 16S rRNA sequencing revealed that challenges resulted recruitment specific bacterial consortia phycosphere, whose functions tightly linked promotion enhancement. In addition, phycosphere was characterized with 47-fold higher enrichment capability resistance genes (ARGs) than surrounding water. Under ARG profiles recruited presumably driven by assembly mobile genetic elements induced antibiotics. Moreover, even enhanced dissemination potential bacteria carrying ARGs from broader environmental niches. Overall, this provides an in-depth understanding functional significance antibiotic-mediated algae-associated for proliferation antibiotic-polluted waters.

Язык: Английский

Процитировано

28

Dissemination of antibiotic resistance genes from aboveground sources to groundwater in livestock farms DOI

Liusheng Lei,

Nan Chen, Zeyou Chen

и другие.

Water Research, Год журнала: 2024, Номер 256, С. 121584 - 121584

Опубликована: Апрель 9, 2024

Язык: Английский

Процитировано

10

Airborne antibiotic resistome and microbiome in pharmaceutical factories DOI Creative Commons
Hong Bai,

Liang-Ying He,

Fang-Zhou Gao

и другие.

Environment International, Год журнала: 2024, Номер 186, С. 108639 - 108639

Опубликована: Апрель 1, 2024

Antimicrobial resistance is considered to be one of the biggest public health problems, and airborne transmission an important but under-appreciated pathway for spread antibiotic genes (ARGs) in environment. Previous research has shown pharmaceutical factories a major source ARGs resistant bacteria (ARB) surrounding receiving water soil environments. Pharmaceutical are hotspots resistance, atmospheric its environmental risk remain more concerns. Here, we conducted metagenomic investigation into microbiome resistome three China. Soil (average: 38.45 %) wastewater 28.53 were contributors resistome. (vanR/vanS, blaOXA, CfxA) conferring critically clinically used antibiotics identified air samples. The treatment area had significantly higher relative abundances 0.64 copies/16 s rRNA). Approximately 28.2 % detected found associated with plasmids, this increased about 50 area. We have compiled list high-risk factories. Moreover, A total 1,043 viral operational taxonomic units linked 47 family-group taxa. Different CRISPR-Cas immune systems been bacterial hosts response phage infection. Similarly, abundance 2451.70 PPM) was Our data provide insights gene profiles (bacterial non-bacterial) reveal potential role horizontal transfer ARGs, implications human animal health.

Язык: Английский

Процитировано

8

Unveiling soil-borne antibiotic resistome and their associated risks: A comparative study of antibiotic and non-antibiotic pharmaceutical factories DOI

Liusheng Lei,

Jing Yu,

Linjia Liu

и другие.

Journal of Hazardous Materials, Год журнала: 2025, Номер 486, С. 137127 - 137127

Опубликована: Янв. 5, 2025

Язык: Английский

Процитировано

1

Critical review of antibiotic resistance genes in the atmosphere DOI Creative Commons

David Kormos,

Kaisen Lin, Amy Pruden

и другие.

Environmental Science Processes & Impacts, Год журнала: 2022, Номер 24(6), С. 870 - 883

Опубликована: Янв. 1, 2022

Our critical review compares ARG profiles in the atmosphere across different locations and discusses characterization methods, atmospheric transport, future research questions.

Язык: Английский

Процитировано

36