Biokatalyse: Enzymatische Synthese für industrielle Anwendungen DOI Creative Commons
Shuke Wu, Radka Šnajdrová, Jeffrey C. Moore

et al.

Angewandte Chemie, Journal Year: 2020, Volume and Issue: 133(1), P. 89 - 123

Published: June 18, 2020

Abstract Die Biokatalyse hat in verschiedenen Einsatzgebieten Anwendung als Alternative zur chemischen Katalyse gefunden, wobei die herausragendsten Beispiele Herstellung chiraler Verbindungen für Pharmazeutika und Riechstoff‐ Aromen‐Industrie sind. Zunehmend werden Biokatalysatoren im großen Maßstab genutzt, um Spezial‐ sogar Bulkchemikalien herzustellen. Dieser Aufsatz soll lehrreiche diesem Gebiet mit besonderem Augenmerk auf skalierbare chemische Verfahren aufzeigen. Es Möglichkeiten Grenzen enzymatischer Synthesen diskutiert, es wird ein Ausblick neu aufstrebende Enzymklassen gegeben.

Biocatalysis: Enzymatic Synthesis for Industrial Applications DOI Creative Commons
Shuke Wu, Radka Šnajdrová, Jeffrey C. Moore

et al.

Angewandte Chemie International Edition, Journal Year: 2020, Volume and Issue: 60(1), P. 88 - 119

Published: June 18, 2020

Abstract Biocatalysis has found numerous applications in various fields as an alternative to chemical catalysis. The use of enzymes organic synthesis, especially make chiral compounds for pharmaceuticals well the flavors and fragrance industry, are most prominent examples. In addition, biocatalysts used on a large scale specialty even bulk chemicals. This review intends give illustrative examples this field with special focus scalable production using enzymes. It also discusses opportunities limitations enzymatic syntheses distinct provides outlook emerging enzyme classes.

Language: Английский

Citations

1065

Biocatalysis DOI Open Access
Elizabeth L. Bell, William Finnigan, Scott P. France

et al.

Nature Reviews Methods Primers, Journal Year: 2021, Volume and Issue: 1(1)

Published: June 24, 2021

Language: Английский

Citations

438

Machine Learning in Enzyme Engineering DOI Creative Commons
Stanislav Mazurenko, Zbyněk Prokop, Jiřı́ Damborský

et al.

ACS Catalysis, Journal Year: 2019, Volume and Issue: 10(2), P. 1210 - 1223

Published: Dec. 13, 2019

Enzyme engineering plays a central role in developing efficient biocatalysts for biotechnology, biomedicine, and life sciences. Apart from classical rational design directed evolution approaches, machine learning methods have been increasingly applied to find patterns data that help predict protein structures, improve enzyme stability, solubility, function, substrate specificity, guide design. In this Perspective, we analyze the state of art databases used training validating predictors engineering. We discuss current limitations challenges which community is facing recent advancements experimental theoretical potential address those challenges. also present our view on possible future directions applications biocatalysts.

Language: Английский

Citations

342

Power of Biocatalysis for Organic Synthesis DOI Creative Commons
Christoph K. Winkler, Joerg H. Schrittwieser, Wolfgang Kroutil

et al.

ACS Central Science, Journal Year: 2021, Volume and Issue: 7(1), P. 55 - 71

Published: Jan. 14, 2021

Biocatalysis, using defined enzymes for organic transformations, has become a common tool in synthesis, which is also frequently applied industry. The generally high activity and outstanding stereo-, regio-, chemoselectivity observed many biotransformations are the result of precise control reaction active site biocatalyst. This achieved by exact positioning reagents relative to each other fine-tuned 3D environment, specific activating interactions between protein, subtle movements catalyst. Enzyme engineering enables one adapt catalyst desired process. A well-filled biocatalytic toolbox ready be used various reactions. Providing nonnatural conditions evolving biocatalysts play with myriad options creating novel transformations thereby opening new, short pathways target molecules. Combining several pot perform reactions concurrently increases efficiency biocatalysis even further.

Language: Английский

Citations

288

Engineered miniature CRISPR-Cas system for mammalian genome regulation and editing DOI Creative Commons
Xiaoshu Xu, Augustine Chemparathy, Leiping Zeng

et al.

Molecular Cell, Journal Year: 2021, Volume and Issue: 81(20), P. 4333 - 4345.e4

Published: Sept. 3, 2021

Compact and versatile CRISPR-Cas systems will enable genome engineering applications through high-efficiency delivery in a wide variety of contexts. Here, we create an efficient miniature Cas system (CasMINI) engineered from the type V-F Cas12f (Cas14) by guide RNA protein engineering, which is less than half size currently used CRISPR (Cas9 or Cas12a). We demonstrate that CasMINI can drive high levels gene activation (up to thousands-fold increases), while natural fails function mammalian cells. show has comparable activities Cas12a for activation, highly specific, allows robust base editing editing. expect be broadly useful cell therapy ex vivo vivo.

Language: Английский

Citations

283

Recent trends in biocatalysis DOI Creative Commons
Dong Yi, Thomas Bayer, Christoffel P. S. Badenhorst

et al.

Chemical Society Reviews, Journal Year: 2021, Volume and Issue: 50(14), P. 8003 - 8049

Published: Jan. 1, 2021

Technological developments enable the discovery of novel enzymes, advancement enzyme cascade designs and pathway engineering, moving biocatalysis into an era technology integration, intelligent manufacturing enzymatic total synthesis.

Language: Английский

Citations

282

The Hitchhiker's guide to biocatalysis: recent advances in the use of enzymes in organic synthesis DOI Creative Commons
R. Ann Sheldon, Dean Brady, Moira L. Bode

et al.

Chemical Science, Journal Year: 2020, Volume and Issue: 11(10), P. 2587 - 2605

Published: Jan. 1, 2020

Enzymes are excellent catalysts that increasingly being used in industry and academia. This Perspective provides a general practical guide to enzymes their synthetic potential, primarily aimed at organic chemists.

Language: Английский

Citations

261

The road to fully programmable protein catalysis DOI
Sarah L. Lovelock, Rebecca Crawshaw, Sophie Basler

et al.

Nature, Journal Year: 2022, Volume and Issue: 606(7912), P. 49 - 58

Published: June 1, 2022

Language: Английский

Citations

232

Advances in ultrahigh-throughput screening for directed enzyme evolution DOI
Ulrich Markel, Khalil Essani,

Volkan Besirlioglu

et al.

Chemical Society Reviews, Journal Year: 2019, Volume and Issue: 49(1), P. 233 - 262

Published: Dec. 9, 2019

This review summarizes how ultrahigh-throughput screening methods employ cells and biomimetic compartments to access the vast, unexplored diversity of biocatalysts with novel functions derived from directed evolution metagenomics libraries.

Language: Английский

Citations

222

Shortening Synthetic Routes to Small Molecule Active Pharmaceutical Ingredients Employing Biocatalytic Methods DOI Creative Commons
Stefan Simić,

Erna Zukić,

Luca Schmermund

et al.

Chemical Reviews, Journal Year: 2021, Volume and Issue: 122(1), P. 1052 - 1126

Published: Nov. 30, 2021

Biocatalysis, using enzymes for organic synthesis, has emerged as powerful tool the synthesis of active pharmaceutical ingredients (APIs). The first industrial biocatalytic processes launched in half last century exploited whole-cell microorganisms where specific enzyme at work was not known. In meantime, novel molecular biology methods, such efficient gene sequencing and triggered breakthroughs directed evolution rapid development process-stable with broad substrate scope good selectivities tailored substrates. To date, are employed to enable shorter, more efficient, sustainable alternative routes toward (established) small molecule APIs, additionally used perform standard reactions API efficiently. Herein, large-scale synthetic containing key steps >130 APIs approved drugs drug candidates compared corresponding chemical protocols (if available) regarding steps, reaction conditions, scale. review is structured according functional group formed reaction.

Language: Английский

Citations

177