The role of FoxA, FiuA, and FpvB in iron acquisition via hydroxamate-type siderophores in Pseudomonas aeruginosa DOI Creative Commons
Virginie Will,

Chloé Frey,

Vincent Normant

et al.

Scientific Reports, Journal Year: 2024, Volume and Issue: 14(1)

Published: Aug. 13, 2024

Siderophores are specialized molecules produced by bacteria and fungi to scavenge iron, a crucial nutrient for growth metabolism. Catecholate-type siderophores mainly bacteria, while hydroxamates mostly from fungi. This study investigates the capacity of nine hydroxamate-type Streptomyces facilitate iron acquisition human pathogen Pseudomonas aeruginosa. Growth assays under limitation 55Fe incorporation tests showed that all promoted bacterial transport. The also aimed identify TonB-dependent transporters (TBDTs) involved in import these siderophores. Using mutant strains lacking specific TBDT genes, it was found is imported into P. aeruginosa cells FpvB coprogen, triacetylfusarinine, fusigen, ferrirhodin, ferrirubin. Iron complexed desferioxamine G transported FoxA, ferricrocin-Fe ferrichrycin-Fe FiuA, rhodotoluric acid-Fe FpvB, another unidentified TBDT. These findings highlight effectiveness transport provide insights complex molecular mechanisms involved, which important understanding microbial interactions ecological balance.

Language: Английский

Microbial interactions for nutrient acquisition in soil: Miners, scavengers, and carriers DOI
Tingting Cao, Yunchao Luo, Man Shi

et al.

Soil Biology and Biochemistry, Journal Year: 2023, Volume and Issue: 188, P. 109215 - 109215

Published: Oct. 24, 2023

Language: Английский

Citations

80

Fungi That Promote Plant Growth in the Rhizosphere Boost Crop Growth DOI Creative Commons
Afeez Adesina Adedayo, Olubukola Oluranti Babalola

Journal of Fungi, Journal Year: 2023, Volume and Issue: 9(2), P. 239 - 239

Published: Feb. 10, 2023

The fungi species dwelling in the rhizosphere of crop plants, revealing functions that endeavor sustainability are commonly referred to as ‘plant-growth-promoting fungi’ (PGPF). They biotic inducers provide benefits and carry out important agricultural sustainability. problem encountered system nowadays is how meet population demand based on yield protection without putting environment human animal health at risk production. PGPF including Trichoderma spp., Gliocladium virens, Penicillium digitatum, Aspergillus flavus, Actinomucor elegans, Podospora bulbillosa, Arbuscular mycorrhizal fungi, etc., have proven their ecofriendly nature ameliorate production crops by improving growth shoots roots germination seeds, chlorophyll for photosynthesis, abundant crops. PGPF’s potential mode action follows: mineralization major minor elements required support plants’ productivity. In addition, produce phytohormones, induced resistance, defense-related enzymes inhibit or eradicate invasion pathogenic microbes, other words, help plants while encountering stress. This review portrays an effective bioagent facilitate promote production, plant growth, resistance disease invasion, various abiotic stresses.

Language: Английский

Citations

73

Beneficial and pathogenic plant‐microbe interactions during flooding stress DOI Creative Commons
Clara Martínez‐Arias, Johanna Witzell, Alejandro Solla

et al.

Plant Cell & Environment, Journal Year: 2022, Volume and Issue: 45(10), P. 2875 - 2897

Published: July 22, 2022

The number and intensity of flood events will likely increase in the future, raising risk flooding stress terrestrial plants. Understanding effects on plant physiology plant-associated microbes is key to alleviate sensitive species ecosystems. Reduced oxygen supply main constrain its associated microbiome. Hypoxic conditions hamper root aerobic respiration and, consequently, hydraulic conductance, nutrient uptake, growth development. Hypoxia favours presence anaerobic rhizosphere roots with potential negative due their pathogenic behaviour or soil denitrification ability. Moreover, physiological metabolic changes induced by may also cause dysbiotic endosphere microbial composition. holobiont (i.e., host microbiome) can be mitigated once displays adaptive responses uptake. Stress relief could arise from positive effect certain beneficial microbes, such as mycorrhiza dark septate endophytes. More research needed explore spiralling, feedback if we want promote tolerance a perspective.

Language: Английский

Citations

52

The application of plant growth-promoting rhizobacteria in Solanum lycopersicum production in the agricultural system: a review DOI Creative Commons
Afeez Adesina Adedayo, Olubukola Oluranti Babalola, Claire Prigent‐Combaret

et al.

PeerJ, Journal Year: 2022, Volume and Issue: 10, P. e13405 - e13405

Published: May 31, 2022

Food safety is a significant challenge worldwide, from plantation to cultivation, especially for perishable products such as tomatoes. New eco-friendly strategies are needed, and beneficial microorganisms might be sustainable solution. This study demonstrates bacteria activity in the tomato plant rhizosphere. Further, it investigates rhizobacteria’s structure, function, diversity soil. Rhizobacteria that promote growth development of plants referred growth-promoting (PGPR). They form series associations with other organisms soil through mutualistic relationship where both parties benefit living together. It implies antagonistic activities rhizobacteria deter pathogens invading their roots. Some PGPR regarded biological control agents hinder spoilage can act an alternative agricultural chemicals may detrimental health humans, animals, some microbes rhizosphere These also help acquire essential nutrients like potassium (K), magnesium (Mg), phosphorus (P), nitrogen (N). offer solution low production tackle food insecurity farming problems. In this review, overview soil-inhabiting focused on improving Solanum lycopersicum .

Language: Английский

Citations

47

Novel Approaches for Sustainable Horticultural Crop Production: Advances and Prospects DOI Creative Commons
Oksana Lastochkina, Sasan Aliniaeifard, Maryam Seifikalhor

et al.

Horticulturae, Journal Year: 2022, Volume and Issue: 8(10), P. 910 - 910

Published: Oct. 5, 2022

Reduction of plant growth, yield and quality due to diverse environmental constrains along with climate change significantly limit the sustainable production horticultural crops. In this review, we highlight prospective impacts that are positive challenges for application beneficial microbial endophytes, nanomaterials (NMs), exogenous phytohormones strigolactones (SLs) new breeding techniques (CRISPR), as well controlled environment horticulture (CEH) using artificial light in The benefits such applications often evaluated by measuring their impact on metabolic, morphological biochemical parameters a variety cultures, which typically results higher yields efficient use resources when applied greenhouse or field conditions. Endophytic microbes promote growth play key role adapting plants habitat, thereby improving prolonging protection from biotic abiotic stresses. Focusing control, considered effects novel class SLs, NMs CEH commodities. addition, genomic editing CRISPR, including its modulating gene expression/transcription factors crop tolerance, was also reviewed.

Language: Английский

Citations

40

Bioprospecting and Challenges of Plant Microbiome Research for Sustainable Agriculture, a Review on Soybean Endophytic Bacteria DOI Creative Commons
Modupe S. Ayilara, Bartholomew Saanu Adeleke, Olubukola Oluranti Babalola

et al.

Microbial Ecology, Journal Year: 2022, Volume and Issue: 85(3), P. 1113 - 1135

Published: Nov. 1, 2022

Abstract This review evaluates oilseed crop soybean endophytic bacteria, their prospects, and challenges for sustainable agriculture. Soybean is one of the most important crops with about 20–25% protein content 20% edible oil production. The ability root-associated microbes to restore soil nutrients enhances yield. Naturally, root endosphere harbors nodule which help increase nitrogen pool reclamation another nutrient loss in plant nutrition. Endophytic bacteria can sustain growth health by exhibiting antibiosis against phytopathogens, production enzymes, phytohormone biosynthesis, organic acids, secondary metabolite secretions. Considerable effort agricultural industry focused on multifunctional concepts bioprospecting use bioinput from ensure a stable ecosystem. Bioprospecting case this systemic overview biorational approach harness beneficial plant-associated food security future. Progress endeavor limited available techniques. molecular techniques unraveling functions explore integrated farming. Our brings light microbial dynamics soybeans current status microbiome research

Language: Английский

Citations

40

Nitrogen, manganese, iron, and carbon resource acquisition are potential functions of the wild rice Oryza rufipogon core rhizomicrobiome DOI Creative Commons
Jingjing Chang, Lei Tian, Márcio Fernandes Alves Leite

et al.

Microbiome, Journal Year: 2022, Volume and Issue: 10(1)

Published: Nov. 22, 2022

Abstract Background The assembly of the rhizomicrobiome, i.e., microbiome in soil adhering to root, is influenced by conditions. Here, we investigated core rhizomicrobiome a wild plant species transplanted an identical type with small differences chemical factors and impact these chemistry on after long-term cultivation. We sampled three natural reserve populations rice (i.e., situ) situ grown ex for more than 40 years determine rhizomicrobiome. Results Generalized joint attribute modeling (GJAM) identified total 44 amplicon sequence variants (ASVs) composing including 35 bacterial ASVs belonging phyla Actinobacteria, Chloroflexi, Firmicutes, Nitrospirae 9 fungal Ascomycota, Basidiomycota, Rozellomycota. Nine genera Haliangium , Anaeromyxobacter Bradyrhizobium Bacillus were abundant rhizosphere rice. main ecological functions nitrogen fixation, manganese oxidation, aerobic chemoheterotrophy, iron respiration, suggesting roles improving nutrient resource acquisition growth. function community was significantly ( p < 0.05) shaped electrical conductivity, nitrogen, available phosphorus present roots. Conclusion discovered that manganese, iron, carbon are potential Oryza rufipogon . Our findings suggest further utilization should consider effects properties abundances different genera.

Language: Английский

Citations

40

Phosphorus-mediated succession of microbial nitrogen, carbon, and sulfur functions in rice-driven saline-alkali soil remediation DOI Creative Commons
Li Ji, Chunjie Tian, Eiko E. Kuramae

et al.

Soil Biology and Biochemistry, Journal Year: 2023, Volume and Issue: 184, P. 109125 - 109125

Published: July 14, 2023

Although rice cultivation holds potential for restoring unproductive saline-alkali soils and increasing food production, the mechanisms underlying relationship between microbial functions soil element turnover remain unclear. To clarify this relationship, study investigated physicochemical properties during remediation in by over 2, 4, 6, 8, 11, 12, 20, 23 years. The results indicated markedly improved nutrients, nutrient stoichiometry, aggregate stability. Additionally, significantly increased involved cycling, such as nitrogen fixation, carbon methanogenesis, dissimilatory sulfate reduction, thiosulfate oxidation. However, these (N), (C), sulfur (S) cycle-related exhibited a similar "increase-peak-decrease" successional pattern with years of remediation, reaching optimal levels when was continuously grown 11–16 Furthermore, correlation analysis demonstrated that succession N, C, S restoration closely related to changes properties, particularly availability phosphorus (P). Therefore, we propose prioritize management P remediation. In conclusion, provides comprehensive understanding mediated crop.

Language: Английский

Citations

30

Rare rhizo-Actinomycetes: A new source of agroactive metabolites DOI Creative Commons
Oghoye Priscilla Oyedoh,

Wei Yang,

Dhanasekaran Dharumadurai

et al.

Biotechnology Advances, Journal Year: 2023, Volume and Issue: 67, P. 108205 - 108205

Published: June 24, 2023

Numerous biotic and abiotic stress in some geographical regions predisposed their agricultural matrix to challenges threatening plant productivity, health, quality. In curbing these threats, different customary agrarian principles have been created through research development, ranging from chemical inputs genetic modification of crops the recently trending smart technology. But peculiarities associated with methods made agriculturists rely on rhizospheric microbiome services, particularly bacteria. Several bacterial resources like Proteobacteria, Firmicutes, Acidobacteria, Actinomycetes (Streptomycetes) are prominent as bioinoculants or application by-products alleviating biotic/abiotic extensively studied, a dearth rare metabolites. Rare known for colossal genome, containing well-preserved genes coding prolific secondary metabolites many agroactive functionalities that can revolutionize industry. Therefore, imperativeness this review express occurrence distributions diversity, soil-associated habitats, successional track rhizosphere under diverse stress, metabolite characteristics remediate productivity.

Language: Английский

Citations

26

Biological roles of soil microbial consortium on promoting safe crop production in heavy metal(loid) contaminated soil: A systematic review DOI
Na Wang, Xiangxiang Wang, Li Chen

et al.

The Science of The Total Environment, Journal Year: 2023, Volume and Issue: 912, P. 168994 - 168994

Published: Dec. 2, 2023

Language: Английский

Citations

23