Effects of nitrile compounds on the structure and function of soil microbial communities as revealed by metagenomes DOI
Ting Gao, Yiwang Wang, Jin-long Lai

et al.

Environmental Research, Journal Year: 2024, Volume and Issue: 261, P. 119700 - 119700

Published: July 27, 2024

Language: Английский

Bioremediation of polycyclic aromatic hydrocarbons: An updated microbiological review DOI
Aswin Thacharodi, Saqib Hassan, Tripti Singh

et al.

Chemosphere, Journal Year: 2023, Volume and Issue: 328, P. 138498 - 138498

Published: March 28, 2023

Language: Английский

Citations

101

Bioremediation of Polycyclic Aromatic Hydrocarbons by Means of Bacteria and Bacterial Enzymes DOI Creative Commons
Anastasiia T. Davletgildeeva, Nikita A. Kuznetsov

Microorganisms, Journal Year: 2024, Volume and Issue: 12(9), P. 1814 - 1814

Published: Sept. 2, 2024

Polycyclic aromatic hydrocarbons (PAHs) are widespread, persistent, and toxic environmental pollutants. Many anthropogenic some natural factors contribute to the spread accumulation of PAHs in aquatic soil systems. The effective environmentally friendly remediation these chemical compounds is an important challenging problem that has kept scientists busy over last few decades. This review briefly summarizes data on main sources PAHs, their toxicity living organisms, physical approaches PAHs. basic idea behind existing bioremediation outlined with emphasis a detailed description use bacterial strains as individual isolates, consortia, or cell-free enzymatic agents.

Language: Английский

Citations

9

Analysis of metagenomic data DOI
Shaopeng Liu, Judith Rodríguez, Viorel Munteanu

et al.

Nature Reviews Methods Primers, Journal Year: 2025, Volume and Issue: 5(1)

Published: Jan. 23, 2025

Language: Английский

Citations

1

Metagenomics-metabolomics analysis of microbial function and metabolism in petroleum-contaminated soil DOI Creative Commons

Yong-Quan Li,

Ying Xin, Caili Li

et al.

Brazilian Journal of Microbiology, Journal Year: 2023, Volume and Issue: 54(2), P. 935 - 947

Published: May 10, 2023

Contamination of soil by petroleum is becoming increasingly serious in the world today. However, research on gene functional characteristics, metabolites and distribution microbial genomes oil-contaminated limited. Considering that, metagenomic metabonomic were used to detect microbes soil, changes pathways analyzed. We found that oil pollution significantly changed composition microorganisms metabolites, promoted relative abundance Pseudoxanthomonas, Pseudomonas, Mycobacterium, Immundisolibacter, etc. The degradation toluene, xylene, polycyclic aromatic hydrocarbon fluorobenzoate increased Xenobiotics biodegradation metabolism. Key monooxygenases dioxygenase systems regulated promote ring opening hydrocarbons. Metabolite contents hydrocarbons (PAHs) such as 9-fluoronone gentisic acid significantly. microbiome degraded pollutants into small molecular substances bioremediation petroleum-contaminated soil. Besides, we discovered complete pathway generate from hydroxylation naphthalene PAHs salicylic acid. This study offers important insights aspect regulation mechanism provides a theoretical basis for screening new degrading bacteria.

Language: Английский

Citations

18

Efficient production of butyric acid from lignocellulosic biomass by revealing the mechanisms of Clostridium tyrobutyricum tolerance to phenolic inhibitors DOI

Linshuang Luo,

Hailing Wei,

Deting Kong

et al.

Bioresource Technology, Journal Year: 2024, Volume and Issue: 396, P. 130427 - 130427

Published: Feb. 7, 2024

Language: Английский

Citations

5

Integrated whole genome sequencing and transcriptomic analysis reveal the biodegradation mechanism of vanillic acid in Herbaspirillum aquaticum KLS-1 DOI
Yong-He Han, Yixi Li,

Wenqian Qiu

et al.

Journal of environmental chemical engineering, Journal Year: 2024, Volume and Issue: 12(4), P. 113221 - 113221

Published: June 1, 2024

Language: Английский

Citations

5

Glycolipid biosurfactant production and petroleum hydrocarbon degradation by a new strain of Citricoccus zhacaiensis DOI
Ranjan Pandey, Bhaskar Krishnamurthy,

Sami Al Obaid

et al.

Biocatalysis and Agricultural Biotechnology, Journal Year: 2024, Volume and Issue: 59, P. 103248 - 103248

Published: May 23, 2024

Language: Английский

Citations

4

Pseudomonas and Acinetobacter spp. capable of metabolizing aromatics displays multifarious plant growth promoting traits: Insights on strategizing consortium-based application to agro-ecosystems DOI Creative Commons

Sandesh E. Papade,

Balaram Mohapatra, Prashant S. Phale

et al.

Environmental Technology & Innovation, Journal Year: 2024, Volume and Issue: 36, P. 103786 - 103786

Published: Aug. 11, 2024

The persistence and slow rate of natural attenuation genotoxic endocrine-disrupting aromatic pollutants has impacted the soil heath agro-ecologies leading to various health environmental issues. Ecotoxic-xenobiotic compounds degradation property along with plant growth promoting traits microbes are beneficial for devising strategies improved agricultural its clean-up. Present study assessed multipartite promoting-, biocontrol- niche adaptive- five degrading bacteria viz. Pseudomonas bharatica CSV86T, sp. C5pp, PP4, PPD Acinetobacter ISP4. Solubilization rock phosphate (P) feldspar (K), production hormone (auxin; IAA), ammonia, siderophores ACC deaminase by strain C5pp PP4 were observed. Similarly, high fusaric acid resistance (MIC: 1–1.2 mg mL−1) tolerance salinity (5–7.5 %) was In vitro application ISP4 as consortium resulted in significant increase (P < 0.05) seedling shoot length (15–37 %), root (65–150 biomass (30–40 wheat, mung bean fenugreek. In-soil microcosm assay confirmed phytoprotective ability this against toxicity aromatics contaminated soil. Antifungal activity phytopathogenic fungi Magnaporthe oryzae Aspergillus spp., produce lytic enzymes HCN suggests their biocontrol potential. Four (as a consortium) exhibiting promotion could be used an eco-friendly bioremediator-biofertilizer-biocontrol agent (bioformulation) restoration crop productivity.

Language: Английский

Citations

4

Construction of a Spatial Distribution Relationship Network between Dissolved Organic Matter and Microbial Communities in Chlorobenzene-Polluted Groundwater DOI
Hui Li,

Zhikang Zhou,

Tianyu Xiang

et al.

ACS ES&T Water, Journal Year: 2025, Volume and Issue: unknown

Published: Jan. 2, 2025

Dissolved organic matter (DOM) is an important geochemical feature connecting pollutants and microorganisms in groundwater. However, the patterns of DOM–microbial community interactions caused by spatial distribution differences remain unclear, necessitating construction a correlation network to elucidate relationships between DOM accurately predict biodegradation process pollutants. This study selected chlorobenzene (CBs)-contaminated bioremediation site analyze fluorescent components molecular structures Microbial metabolic activities were more active areas with high CBs concentration, leading significant microbial source contributions DOM. Intense degradation processes accompanied transformation highly oxidized unsaturated Co-occurrence analysis revealed that communities exhibited density, Pseudomonas playing crucial role The constructed DOM–CBs–microbial relationship showed indices, such as O/C, NOSC, CHO (%), strongly correlated structure could directly indicate CBs. characteristics their links provide rapid accurate method monitor contaminated

Language: Английский

Citations

0

Enhancing Dichlorobenzene Degradation in Sulfate-Rich Groundwater Using Yeast Extract: Performance and Microbial Responses DOI

Chunmei Ye,

Ouyang Ji,

Qingqing Li

et al.

Journal of environmental chemical engineering, Journal Year: 2025, Volume and Issue: unknown, P. 115433 - 115433

Published: Jan. 1, 2025

Language: Английский

Citations

0