MS‐based glycomics and glycoproteomics methods enabling isomeric characterization DOI
Wenjing Peng, Cristian D. Gutierrez Reyes, Sakshi Gautam

et al.

Mass Spectrometry Reviews, Journal Year: 2021, Volume and Issue: 42(2), P. 577 - 616

Published: June 22, 2021

Abstract Glycosylation is one of the most significant and abundant posttranslational modifications in mammalian cells. It mediates a wide range biofunctions, including cell adhesion, communication, immune trafficking, protein stability. Also, aberrant glycosylation has been associated with various diseases such as diabetes, Alzheimer's disease, inflammation, deficiencies, congenital disorders, cancers. The alterations distributions glycan glycopeptide isomers are involved development progression several human diseases. However, microheterogeneity brings great challenge to glycomic glycoproteomic analysis, characterization isomers. Over decades, different methods approaches have developed facilitate Mass spectrometry (MS) powerful tool utilized for isomeric analysis due its high sensitivity rich structural information using fragmentation techniques. comprehensive remains when utilizing MS alone. Therefore, separation methods, liquid chromatography, capillary electrophoresis, ion mobility, were resolve before MS. These techniques coupled better identification quantitation Additionally, bioinformatic tools essential automated processing data studies biological cohorts. Here this review, we discuss commonly employed MS‐based techniques, hyphenated software, facilitating separation, identification,

Language: Английский

Biological roles of glycans DOI Open Access
Ajit Varki

Glycobiology, Journal Year: 2016, Volume and Issue: 27(1), P. 3 - 49

Published: Aug. 24, 2016

Simple and complex carbohydrates (glycans) have long been known to play major metabolic, structural physical roles in biological systems. Targeted microbial binding host glycans has also studied for decades. But such can only explain some of the remarkable complexity organismal diversity nature. Reviewing subject about two decades ago, one could find very few clear-cut instances glycan-recognition-specific that were intrinsic value organism expressing them. In striking contrast there is now a profusion examples, this updated review cannot be comprehensive. Instead, historical overview presented, broad principles outlined examples cited, representing diverse types roles, mediated by various glycan classes, different evolutionary lineages. What remains unchanged fact while all theories regarding are supported compelling evidence, exceptions each found. retrospect, not surprising. Complex appear ubiquitous cells nature, essential life forms. Thus, >3 billion years evolution consistently generated organisms use these molecules many key even sometimes coopting them minor functions. respect, no from other macromolecular building blocks (nucleic acids, proteins lipids), simply more rapidly evolving complex. It time functional fully incorporated into mainstream sciences.

Language: Английский

Citations

2207

Global view of human protein glycosylation pathways and functions DOI
Katrine T. Schjoldager, Yoshiki Narimatsu, Hiren J. Joshi

et al.

Nature Reviews Molecular Cell Biology, Journal Year: 2020, Volume and Issue: 21(12), P. 729 - 749

Published: Oct. 21, 2020

Language: Английский

Citations

920

Congenital myasthenic syndromes: pathogenesis, diagnosis, and treatment DOI
Andrew G. Engel, Xin‐Ming Shen, Duygu Selcen

et al.

The Lancet Neurology, Journal Year: 2015, Volume and Issue: 14(4), P. 420 - 434

Published: March 16, 2015

Language: Английский

Citations

494

Role ofO-linkedN-acetylglucosamine protein modification in cellular (patho)physiology DOI
John C. Chatham, Jianhua Zhang, Adam R. Wende

et al.

Physiological Reviews, Journal Year: 2020, Volume and Issue: 101(2), P. 427 - 493

Published: July 30, 2020

In the mid-1980s, identification of serine and threonine residues on nuclear cytoplasmic proteins modified by a N-acetylglucosamine moiety (O-GlcNAc) via an O-linkage overturned widely held assumption that glycosylation only occurred in endoplasmic reticulum, Golgi apparatus, secretory pathways. contrast to traditional glycosylation, O-GlcNAc modification does not lead complex, branched glycan structures is rapidly cycled off transferase (OGT) O-GlcNAcase (OGA), respectively. Since its discovery, O-GlcNAcylation has been shown contribute numerous cellular functions, including signaling, protein localization stability, transcription, chromatin remodeling, mitochondrial function, cell survival. Dysregulation cycling implicated progression wide range diseases, such as diabetes, diabetic complications, cancer, cardiovascular, neurodegenerative diseases. This review will outline our current understanding processes involved regulating turnover, role physiology, how dysregulation contributes pathophysiological processes.

Language: Английский

Citations

220

Neurological Aspects of Human Glycosylation Disorders DOI
Hudson H. Freeze, Erik A. Eklund, Bobby G. Ng

et al.

Annual Review of Neuroscience, Journal Year: 2015, Volume and Issue: 38(1), P. 105 - 125

Published: April 4, 2015

This review presents principles of glycosylation, describes the relevant glycosylation pathways and their related disorders, highlights some neurological aspects issues that continue to challenge researchers. More than 100 rare human genetic disorders result from deficiencies in different are known today. Most these impact central and/or peripheral nervous systems. Patients typically have developmental delays/intellectual disabilities, hypotonia, seizures, neuropathy, metabolic abnormalities multiple organ Among there is great clinical diversity because all cell types differentially glycosylate proteins lipids. The patients hundreds misglycosylated products, which afflict a myriad processes, including signaling, cell-cell interaction, migration. vast complexity glycan composition function, along with limited availability analytic tools, has impeded identification key glycosylated molecules cause pathologies. To date, few critical target been pinpointed.

Language: Английский

Citations

214

Perspectives on Glycosylation and Its Congenital Disorders DOI Creative Commons
Bobby G. Ng, Hudson H. Freeze

Trends in Genetics, Journal Year: 2018, Volume and Issue: 34(6), P. 466 - 476

Published: March 29, 2018

Language: Английский

Citations

208

Mannose metabolism: More than meets the eye DOI
Vandana Sharma,

Mie Ichikawa,

Hudson H. Freeze

et al.

Biochemical and Biophysical Research Communications, Journal Year: 2014, Volume and Issue: 453(2), P. 220 - 228

Published: June 12, 2014

Language: Английский

Citations

196

Congenital disorders of glycosylation DOI Creative Commons
Irene J. Chang, Miao He, Christina Lam

et al.

Annals of Translational Medicine, Journal Year: 2018, Volume and Issue: 6(24), P. 477 - 477

Published: Dec. 1, 2018

Abstract: Congenital disorders of glycosylation are a genetically and clinically heterogeneous group >130 diseases caused by defects in various steps along glycan modification pathways. The vast majority these monogenic autosomal recessive have multi-systemic manifestations, mainly growth failure, developmental delay, facial dysmorphisms, variable coagulation endocrine abnormalities. Carbohydrate deficient transferrin (CDT) protein-linked analysis with mass spectrometry can diagnose some subtypes congenital (CDG), while many currently rely on massively parallel genomic sequencing for diagnosis. Early detection is important, as few treatable. Molecular biochemical techniques continue to further our understanding this rapidly expanding diverse disorders.

Language: Английский

Citations

194

The intrinsic and extrinsic effects of N-linked glycans on glycoproteostasis DOI
Daniel N. Hebert,

Lydia Lamriben,

Evan T. Powers

et al.

Nature Chemical Biology, Journal Year: 2014, Volume and Issue: 10(11), P. 902 - 910

Published: Oct. 17, 2014

Language: Английский

Citations

185

What is new in CDG? DOI
Jaak Jaeken, Romain Péanne

Journal of Inherited Metabolic Disease, Journal Year: 2017, Volume and Issue: 40(4), P. 569 - 586

Published: May 8, 2017

Language: Английский

Citations

148