Relative importance of soil properties and heavy metals/metalloids to modulate microbial community and activity at a smelting site DOI

Xue-Ting Bai,

Jichen Wang, Hailiang Dong

et al.

Journal of Soils and Sediments, Journal Year: 2020, Volume and Issue: 21(1), P. 1 - 12

Published: July 30, 2020

Language: Английский

Anaerobic digestion of food waste for bio-energy production in China and Southeast Asia: A review DOI
Camilla Negri, Marina Ricci, Massimo Zilio

et al.

Renewable and Sustainable Energy Reviews, Journal Year: 2020, Volume and Issue: 133, P. 110138 - 110138

Published: July 31, 2020

Language: Английский

Citations

180

Bacillus subtilis biofertilizer mitigating agricultural ammonia emission and shifting soil nitrogen cycling microbiomes DOI Creative Commons
Bo Sun, Zhihui Bai, Lijun Bao

et al.

Environment International, Journal Year: 2020, Volume and Issue: 144, P. 105989 - 105989

Published: July 30, 2020

Excessive ammonia (NH3) emitted from nitrogen fertilizer application in farmland have caused serious disturbance to global environment, including reduction of visibility, formation regional haze, and increase deposition. Application biofertilizer has been considered as an effective approach for soil improvement agriculture sustainability. In this study, a field experiment was conducted evaluate the potential B. subtilis on mitigating NH3 volatilization investigate underlying mechanisms. Compared with organic fertilizer, incorporation reduced by up 44%. Moreover, abundance ureC gene, increased functional genes (bacterial amoA comammox amoA) ammonia-oxidizing bacteria (AOB). This indicated that conversion NH4+-N decreased nitrification process increased. brief, "source" "sink" NH4+-N, thus reducing retention alkaline soil, volatilization. These results is control strategy agricultural emission, maintaining high crop yield environmental disturbance.

Language: Английский

Citations

139

Ubiquity, diversity, and activity of comammox Nitrospira in agricultural soils DOI

Shaoyi Xu,

Baozhan Wang, Yong Li

et al.

The Science of The Total Environment, Journal Year: 2019, Volume and Issue: 706, P. 135684 - 135684

Published: Nov. 22, 2019

Language: Английский

Citations

132

Abundance and community composition of comammox bacteria in different ecosystems by a universal primer set DOI
Zhirong Zhao, Guohe Huang,

Shishi He

et al.

The Science of The Total Environment, Journal Year: 2019, Volume and Issue: 691, P. 146 - 155

Published: July 9, 2019

Language: Английский

Citations

131

Distribution and Diversity of Comammox Nitrospira in Coastal Wetlands of China DOI Creative Commons
Dongyao Sun,

Xiufeng Tang,

Mengyue Zhao

et al.

Frontiers in Microbiology, Journal Year: 2020, Volume and Issue: 11

Published: Oct. 6, 2020

Complete ammonia oxidizers (comammox), able to individually oxidize nitrate, are considered play a significant role in the global nitrogen cycle. However, distribution of comammox Nitrospira estuarine tidal flat wetland and environmental drivers affecting their abundance diversity remain unknown. Here, we present large-scale investigation on geographical along wetlands China, where were successfully detected 9 16 sampling sites. The ranged from 4.15 × 105 6.67 106 copies/g, 2.21- 5.44-folds lower than canonical oxidizers: ammonia-oxidizing bacteria (AOB) archaea (AOA). Phylogenetic analysis based alpha subunit monooxygenase encoding gene (amoA) revealed that Clade A, mainly originating upstream river inputs, accounts for more 80% Nitrospira, whereas clade B rarely detected. Comammox dominant OTUs varied within samples, showing pattern. Salinity pH most important wetlands. was further negatively correlated with high nitrite concentrations. Altogether, this study existence, driving factors ecosystems, thus providing insights into ecological niches recently discovered nitrifying consortium contributions nitrification environments.

Language: Английский

Citations

80

Niche differentiation of clade A comammox Nitrospira and canonical ammonia oxidizers in selected forest soils DOI
Chaoyu Li, Hang‐Wei Hu, Qing‐Lin Chen

et al.

Soil Biology and Biochemistry, Journal Year: 2020, Volume and Issue: 149, P. 107925 - 107925

Published: July 28, 2020

Language: Английский

Citations

79

Realizing the role of N-acyl-homoserine lactone-mediated quorum sensing in nitrification and denitrification: A review DOI
Na Wang, Jie Gao, Ying Liu

et al.

Chemosphere, Journal Year: 2021, Volume and Issue: 274, P. 129970 - 129970

Published: Feb. 16, 2021

Language: Английский

Citations

73

Abundance and Functional Importance of Complete Ammonia Oxidizers and Other Nitrifiers in a Riparian Ecosystem DOI

Shanyun Wang,

Xiaomin Wang, Yingying Jiang

et al.

Environmental Science & Technology, Journal Year: 2021, Volume and Issue: 55(8), P. 4573 - 4584

Published: March 18, 2021

The discovery of complete ammonia oxidation (comammox) has altered our understanding nitrification, which is the rate-limiting process in global nitrogen cycle. However, ecological role comammox or its contribution to nitrification both natural and artificial ecosystems still infancy. Here, we investigated community distribution function bacteria riparian analyzed interactions between other cycling microorganisms. bacterial abundance rate were higher summer than winter nonrhizosphere soils rhizosphere. Fringe zone comprise a hotspot, where (2.58 × 108 copies g–1) (0.86 mg N kg–1 d–1) not only at sampling sites but also those processes. correlated significantly positively with relative species Candidatus Nitrospira nitrificans that nitrosa. Analysis interaction ammonia-oxidizing processes revealed archaea dominate interface soils, fringe anaerobic ammonium (anammox) sediments zone. These results indicate may constitute an important currently underestimated microbial ecosystems.

Language: Английский

Citations

72

Niche specialization of comammox Nitrospira in terrestrial ecosystems: Oligotrophic or copiotrophic? DOI Creative Commons
Chaoyu Li, Zi-Yang He, Hang‐Wei Hu

et al.

Critical Reviews in Environmental Science and Technology, Journal Year: 2022, Volume and Issue: 53(2), P. 161 - 176

Published: March 20, 2022

The discovery of complete ammonia oxidizers, comammox Nitrospira, represents a breakthrough in the history nitrification research. Nitrospira inopinata, which was obtained from an aquatic ecosystem, is only pure bacterial isolate reported so far. Ammonia oxidation kinetics N. inopinata indicated that they prefer oligotrophic lifestyle and may directly compete with ammonia-oxidizing archaea (AOA), but representatives terrestrial ecosystems are lacking. Current studies demonstrate functionally dominant separated most sequences engineering systems. Clades A B seemingly have different ecological preferences soils, possibly due to their ammonium uptake Analyses evolutionary indicate some genes involved could be laterally transferred β-ammonia-oxidizing bacteria (AOB). Some species similar AOB active niches where previously considered dominated by AOB. Taken together, this review summarizes recent findings biogeographical distribution preference large-scale soil surveys, responses nitrogen application soil, putative mechanisms underpinning niche Nitrospira. These suggest not strictly both copiotrophic broader breadth. Comammox abundant environments. profoundly expanded our knowledge environmental relative contribution soils.

Language: Английский

Citations

60

Differential impacts of lime and nitrogen amendment on nitrification, ammonia oxidizers, nitrite oxidizers, and bacterial communities in two acidic soils DOI
Qing Wang, Xin Yu, Kun Yang

et al.

Applied Soil Ecology, Journal Year: 2025, Volume and Issue: 206, P. 105890 - 105890

Published: Jan. 16, 2025

Language: Английский

Citations

1