Analysing carbapenemases in hospital wastewater: Insights from intracellular and extracellular DNA using qPCR and digital PCR DOI Creative Commons

Tim Erler,

Felix Droop,

Christoph Lübbert

et al.

The Science of The Total Environment, Journal Year: 2024, Volume and Issue: 950, P. 175344 - 175344

Published: Aug. 6, 2024

The widespread dissemination of carbapenem-resistant bacteria in wastewater systems, particularly from clinical sources, poses a significant public health risk. This study assessed the concentrations and distributions extracellular DNA (exDNA) intracellular (iDNA) harboring carbapenemase genes six tertiary care hospitals Germany. We collected total 36 samples, comprising biological replicates each hospital, analysed them using quantitative real-time PCR (qPCR) digital (dPCR). analysis targeted seven genes: bla

Language: Английский

Molecular epidemiology and mechanisms of carbapenem and colistin resistance in Klebsiella and other Enterobacterales from treated wastewater in Croatia DOI Creative Commons
Ana Puljko, Ivan Barišić, Svjetlana Dekić

et al.

Environment International, Journal Year: 2024, Volume and Issue: 185, P. 108554 - 108554

Published: March 1, 2024

Among the most problematic bacteria with clinical relevance are carbapenem-resistant Enterobacterales (CRE), as there very limited options for their treatment. Treated wastewater can be a route release of these into environment and population. The aim this study was to isolate CRE from treated Zagreb treatment plant determine phenotypic genomic characteristics. A total 200 suspected were isolated, 148 which confirmed by MALDI-TOF MS. predominant species Klebsiella spp. (n = 47), followed Citrobacter 40) Enterobacter cloacae complex (cplx.) 35). All isolates carbapenemase producers multidrug-resistant phenotype. Using multi-locus sequence typing whole-genome sequencing (WGS), 18 different types identified among isolates, 14 associated human-associated clones. virulence gene analysis sequenced 7) revealed potential pathogenicity. PCR WGS showed that frequent genes in K. pneumoniae blaOXA-48 blaNDM-1, frequently occurred together, while blaKPC-2 together blaNDM-1 mainly detected oxytoca, E. cplx. Colistin resistance observed 40 % 57 isolates. Underlying mechanisms include known potentially novel intrinsic (point mutations pmrA/B, phoP/Q, mgrB crrB genes) acquired (mcr-4.3 gene). mcr-4.3 first time is probably located on conjugative IncHI1B plasmid. In addition, 13 various other clinically relevant antibiotics well plasmids possibly genes. Our demonstrates important role municipal plays harboring spreading enterobacterial pathogens resistant last-resort antibiotics.

Language: Английский

Citations

8

Small-scale wastewater-based epidemiology (WBE) for infectious diseases and antibiotic resistance: A scoping review DOI Creative Commons
Dennis Schmiege, Timo Haselhoff, A. G. R. Thomas

et al.

International Journal of Hygiene and Environmental Health, Journal Year: 2024, Volume and Issue: 259, P. 114379 - 114379

Published: April 15, 2024

Wastewater analysis can serve as a source of public health information. In recent years, wastewater-based epidemiology (WBE) has emerged and proven useful for the detection infectious diseases. However, insights from wastewater treatment plant do not allow small-scale differentiation within sewer system that is needed to analyze target population under study in more detail. Small-scale WBE offers several advantages, but there been no systematic overview its application. The aim this scoping review provide comprehensive current state knowledge on diseases, including methodological considerations A database search was conducted, considering only peer-reviewed articles. Data analyses included quantitative summary qualitative narrative synthesis. Of 2130 articles, we 278, most which were published since 2020. studies analyzed at building level (n = 203), especially healthcare 110) educational facilities 80), neighborhood scale 86). main analytical parameters viruses 178), notably SARS-CoV-2 161), antibiotic resistance (ABR) biomarkers 99), often by polymerase chain reaction (PCR), with DNA sequencing techniques being less common. terms sampling techniques, active dominated. frequent lack detailed information specification selection criteria characterization sites identified concern. conclusion, based large number studies, overarching strategic aspects WBE. An enabling environment requires inter- transdisciplinary sharing across countries. Promoting adoption will benefit common international conceptualization approach, standardized internationally accepted terminology. particular, development good practices different warranted. This includes establishment guidelines local sub-sewersheds, transparent reporting ensure comparability results.

Language: Английский

Citations

7

Epidemiological and genomic insights of mcr-1-positive colistin-resistant Klebsiella pneumoniae species complex strains from wastewater treatment plants in Shanghai DOI
Min Jia, Jing Zhang, Jun Feng

et al.

Environmental Pollution, Journal Year: 2025, Volume and Issue: unknown, P. 126146 - 126146

Published: March 1, 2025

Language: Английский

Citations

0

Hospital wastewater as source of human pathogenic bacteria: a phenotypic and genomic analysis of international high-risk clone VIM-2-producing Pseudomonas aeruginosa ST235/O11 DOI
Guilherme Sgobbi Zagui, Otávio Guilherme Gonçalves de Almeida,

Natália Columbaro Moreira

et al.

Environmental Research, Journal Year: 2024, Volume and Issue: 255, P. 119166 - 119166

Published: May 16, 2024

Language: Английский

Citations

3

Antimicrobial resistance in global catfish aquaculture: Trends, control strategies, and public health implications DOI
Manoj Kumar Shahi, Justice Opare Odoi,

Saran Anuntawirun

et al.

Aquaculture, Journal Year: 2025, Volume and Issue: unknown, P. 742552 - 742552

Published: April 1, 2025

Language: Английский

Citations

0

Comprehensive metagenomic analysis of bacterial diversity and antimicrobial resistance genes in coastal sediments from urbanized Indian cities DOI

Pradip Sahebrao Gawande,

Vajravelu Manigandan,

Rabina Ganesh

et al.

Gene Reports, Journal Year: 2025, Volume and Issue: unknown, P. 102239 - 102239

Published: April 1, 2025

Language: Английский

Citations

0

Cyclodextrin modified silver nanoparticle SERS substrate for detection of antibiotic residues in water DOI
Mingcheng Han, Liqin Jiang, Zelun Zhi

et al.

Microchemical Journal, Journal Year: 2025, Volume and Issue: unknown, P. 113924 - 113924

Published: May 1, 2025

Language: Английский

Citations

0

Comprehensive Profiling of Klebsiella in Surface Waters from Northern Portugal: Understanding Patterns in Prevalence, Antibiotic Resistance, and Biofilm Formation DOI Open Access
Sara Araújo, Vanessa Silva, Maria de Lurdes Enes Dapkevicius

et al.

Water, Journal Year: 2024, Volume and Issue: 16(9), P. 1297 - 1297

Published: May 2, 2024

This study investigates the prevalence of resistance and virulence genes in Klebsiella isolates from surface waters Northern Portugal, within broader context freshwater quality challenges Southern Europe. The aim this research is to explain how dynamics, antibiotic resistance, biofilm formation interact waters. Antimicrobial susceptibility was examined using Kirby–Bauer disk diffusion method against 11 antibiotics screening for Extended-Spectrum Beta-Lactamase (ESBL) production double-disk synergy. PCR employed detect genes, while assessed microplate method. Out 77 water isolates, 33 (14 spp. 19 K. pneumoniae strains) were isolated. ESBL observed 36.8% 28.6% High rates blaCTX-U both. papC gene prevalent, signifying potential environmental risks. Biofilm averaged 81.3% 86.9% These findings underscore intricate interplay between Klebsiella’s dynamics quality, with ESBL’s raising concerns about waterborne dissemination public health implications. work supports need vigilance

Language: Английский

Citations

2

Molecular Characterization of Cryptosporidium spp., Giardia duodenalis, Enterocytozoon bieneusi and Escherichia coli in Dairy Goat Kids with Diarrhea in Partial Regions of Shaanxi Province, China DOI Creative Commons
Xin Yang, Junwei Wang, Shuang Huang

et al.

Animals, Journal Year: 2023, Volume and Issue: 13(18), P. 2922 - 2922

Published: Sept. 14, 2023

Cryptosporidium spp., Giardia duodenalis, Enterocytozoon bieneusi and Escherichia coli are important diarrheal pathogens threatening the health of humans various animals. Goats, especially pre-weaned goat kids, that carry these reservoirs related to human infection. In present study, PCR-based sequencing techniques were applied characterize G. E. in 202 fecal samples kids for Guanzhong dairy goats from five locations Shaanxi Province. The positive rates 37.6% (76/202), 16.3% (33/202), 55.4% (112/202) 78.7% (159/202) respectively. Co-infection two four was found 114 samples. Significant differences (p < 0.001) spp. duodenalis among age groups. Furthermore, species (C. parvum C. xiaoi), assemblages (E A), nine genotypes (CHG3, CHG1, BEB6, CHG5, CHG2, SX1, CHG28, COS-II CD6) pathotypes (EPEC EHEC) identified. As Cryptosporidium, (IIdA19G1 IIdA19G2) (XXIIIa XXIIIg) subtypes recognized xiaoi, A phylogenetic analysis based on ITS locus indicated all identified this study belonged group 2. Four virulence factors (ehxA, eae, stx2 stx1) EPEC EHEC strains. Collectively, explored colonization frequency Province expanded our understanding genetic composition zoonotic potential goats.

Language: Английский

Citations

6

Genetic traits and transmission of antimicrobial resistance characteristics of cephalosporin resistant Escherichia coli in tropical aquatic environments DOI

Qiyi Yuan,

Wenxuan Li, Shin Giek Goh

et al.

Journal of Hazardous Materials, Journal Year: 2024, Volume and Issue: 479, P. 135707 - 135707

Published: Sept. 2, 2024

Language: Английский

Citations

1