Advances, challenges, and opportunities for food safety analysis in the isothermal nucleic acid amplification/CRISPR-Cas12a era DOI

Pengpeng Xue,

Yubo Peng, Renjing Wang

et al.

Critical Reviews in Food Science and Nutrition, Journal Year: 2024, Volume and Issue: unknown, P. 1 - 16

Published: April 24, 2024

Global food safety stands out as a prominent public concern, affecting populations worldwide. The recurrent challenge of incidents reveals the need for robust inspection framework. In recent years, integration isothermal nucleic acid amplification with CRISPR-Cas12a techniques has emerged promising tool molecular detection hazards, presenting next generation biosensing detection. This paper provides comprehensive review current state research on synergistic application and technology in field safety. innovative combination not only enriches analytical tools, but also improving assay performance such sensitivity specificity, addressing limitations traditional methods. summarized various methodologies by diverse concerns, including pathogenic bacterium, viruses, mycotoxins, adulteration, genetically modified foods. Each section elucidates specific strategies employed highlights advantages conferred. Furthermore, discussed challenges faced this context safety, offering insightful discussions potential solutions future prospects.

Language: Английский

Diverse methods of reducing and confirming false-positive results of loop-mediated isothermal amplification assays: A review DOI
So-Hee Kim, So‐Young Lee,

Unji Kim

et al.

Analytica Chimica Acta, Journal Year: 2023, Volume and Issue: 1280, P. 341693 - 341693

Published: Aug. 7, 2023

Language: Английский

Citations

62

Lift-CM: An integrated Lift-heater Centrifugal Microfluidic Platform for point-of-care pathogen nucleic acid detection using Isothermal amplification and CRISPR/Cas12a DOI

Taowei Shu,

Xueer Yin,

Qihua Xiong

et al.

Biosensors and Bioelectronics, Journal Year: 2025, Volume and Issue: 274, P. 117178 - 117178

Published: Jan. 18, 2025

Language: Английский

Citations

2

CRISPR–Cas12‐based field‐deployable system for rapid detection of synthetic DNA sequence of the monkeypox virus genome DOI
Qun Chen, Ijaz Gul, Changyue Liu

et al.

Journal of Medical Virology, Journal Year: 2022, Volume and Issue: 95(1)

Published: Dec. 8, 2022

The global outbreak of the monkeypox virus (MPXV) highlights need for rapid and cost-effective MPXV detection tools to effectively monitor control disease. Herein, we demonstrated a portable CRISPR-Cas-based system naked-eye MPXV. harnesses high selectivity CRISPR-Cas12 isothermal nucleic acid amplification potential recombinase polymerase amplification. It can detect both current circulating clade original clades. We reached limit (LoD) 22.4 aM (13.5 copies/µl) using microtiter plate reader, while visual LoD is 75 (45 in two-step assay, which further reduced 25 (15 one-pot system. compared our results with quantitative chain reaction obtained satisfactory consistency. For clinical application, sensitive precise method attomolar sensitivity sample-to-answer time 35 min.

Language: Английский

Citations

52

CRISPR/Cas Systems‐Inspired Nano/Biosensors for Detecting Infectious Viruses and Pathogenic Bacteria DOI
Xianlong Zhang,

Yiheng Shi,

Guang Chen

et al.

Small Methods, Journal Year: 2022, Volume and Issue: 6(10)

Published: Sept. 16, 2022

Abstract Infectious pathogens cause severe human illnesses and great deaths per year worldwide. Rapid, sensitive, accurate detection of is importance for preventing infectious diseases caused by optimizing medical healthcare systems. Inspired a microbial defense system (i.e., CRISPR/ CRISPR‐associated proteins (Cas) system, an adaptive immune protecting microorganisms from being attacked invading species), many new biosensors have been successfully developed widely applied in the viruses pathogenic bacteria. Moreover, advanced nanotechnologies also integrated into these to improve their stability, sensitivity, accuracy. In this review, recent advance CRISPR/Cas systems‐based nano/biosensors applications bacteria are comprehensively reviewed. First all, categories working principles systems establishing simply introduced. Then, design construction discussed. end, attentions focused on Impressively, remaining opportunities challenges further development system‐based promising proposed.

Language: Английский

Citations

48

Digital Recombinase Polymerase Amplification, Digital Loop‐Mediated Isothermal Amplification, and Digital CRISPR‐Cas Assisted Assay: Current Status, Challenges, and Perspectives DOI
Weihong Yin, Jianjian Zhuang, Jiale Li

et al.

Small, Journal Year: 2023, Volume and Issue: 19(49)

Published: Aug. 23, 2023

Abstract Digital nucleic acid detection based on microfluidics technology can quantify the initial amount of in sample with low equipment requirements and simple operations, which be widely used clinical vitro diagnosis. Recently, isothermal amplification technologies such as recombinase polymerase (RPA), loop‐mediated (LAMP), clustered regularly interspaced short palindromic repeats‐CRISPR associated proteins (CRISPR‐Cas) assisted have become a hot spot attention state‐of‐the‐art digital chips provided powerful tool for these technologies. Herein, including RPA, LAMP, CRISPR‐Cas methods, recently, been reviewed. Moreover, challenges possible strategies to address them are discussed. Finally, future directions technology, microfluidic chip device manufacturing, multiplex detection, one‐pot outlined.

Language: Английский

Citations

38

CRISPR/Cas-based nanobiosensors: A reinforced approach for specific and sensitive recognition of mycotoxins DOI

Ma Haowei,

Shadi Ebrahimi, Sofiène Mansouri

et al.

Food Bioscience, Journal Year: 2023, Volume and Issue: 56, P. 103110 - 103110

Published: Sept. 9, 2023

Language: Английский

Citations

30

An Ultrasensitive Colorimetric Foodborne Pathogenic Detection Method Using a CRISPR/Cas12a Mediated Strand Displacement/Hybridization Chain Reaction DOI

Yayun Jiang,

Chaochuan Zheng,

Ming Jin

et al.

Journal of Agricultural and Food Chemistry, Journal Year: 2023, Volume and Issue: 71(9), P. 4193 - 4200

Published: Feb. 22, 2023

Accurate, rapid, and sensitive pathogenic detections play an important role in food safety. Herein, we developed a novel CRISPR/Cas12a mediated strand displacement/hybridization chain reaction (CSDHCR) nucleic acid assay for foodborne colorimetric detection. A biotinylated DNA toehold is coupled on avidin magnetic beads acts as initiator to trigger the SDHCR. The SDHCR amplification allowed formation of long hemin/G-quadruplex-based DNAzyme products catalyze TMB-H2O2 reaction. In presence targets, trans-cleavage activity was activated cleave DNA, resulting failure no color change. Under optimal conditions, CSDHCR has satisfactory linear detection targets with regression equation Y = 0.0531*X - 0.0091 (R2 0.9903) range 10 fM 1 nM, limit determined 4.54 fM. addition, Vibrio vulnificus, one pathogen, used verify practical application method, it showed specificity sensitivity at 1.0 × 100 CFU/mL coupling recombinase polymerase amplification. Our proposed biosensor could be promising alternative method ultrasensitive visual acids pathogens.

Language: Английский

Citations

28

CRISPR/Cas13a-triggered Cas12a biosensing method for ultrasensitive and specific miRNA detection DOI

Dan Zhao,

Jiutang Tang,

Qin Tan

et al.

Talanta, Journal Year: 2023, Volume and Issue: 260, P. 124582 - 124582

Published: April 23, 2023

Language: Английский

Citations

23

CRISPR molecular detection techniques: Advances from single to multiple detection methods DOI

Zefeng Mao,

Lei Huang, Ruipeng Chen

et al.

TrAC Trends in Analytical Chemistry, Journal Year: 2023, Volume and Issue: 166, P. 117198 - 117198

Published: July 24, 2023

Language: Английский

Citations

23

A universal nucleic acid detection platform combing CRISPR/Cas12a and strand displacement amplification with multiple signal readout DOI
Li Tian, Jinjin Wang,

Jiaoyuan Fang

et al.

Talanta, Journal Year: 2024, Volume and Issue: 273, P. 125922 - 125922

Published: March 18, 2024

Language: Английский

Citations

13