Tetrasiklin Antibiyotikleri ve Bromelain Enzimi Arasındaki Etkileşimlerin Kenetleme Araçları Kullanılarak İncelenmesi DOI Open Access
Gülgün Aylaz

Iğdır Üniversitesi Fen Bilimleri Enstitüsü Dergisi, Journal Year: 2023, Volume and Issue: 13(4), P. 2986 - 2996

Published: Nov. 29, 2023

Bromelain, extracted from the stem of pineapple, is a complex enzyme used for different purposes. Bromelain supplements are often to facilitate digestion, improve circulatory system and relieve arthritis symptoms due its pain relief. However, in some cases where there risk antibiotic use or bleeding, bromelain direct consumption pineapple should be limited. For this purpose, study was carried out show mechanism by which interaction occurs. Firstly, molecule demeclocycline, minocycline, tetracycline antibiotics were prepared UCSF Chimera visualizing program. The interactions monitored Auto Dock Molecular Modelling Toolkit molecular modeling free binding energies these also calculated Dock. According modelling results, interact with hydrogen bonds hydrophobic interactions. These between energetically favorable based on energy calculations.

Language: Английский

Insight into cyclodextrin hybrid framework formation mechanism to develop a universal vehicle for improving mitochondrial homeostasis DOI
Danyu Lv,

Jiane-Kang Liu,

Huanyu Xu

et al.

Chemical Engineering Journal, Journal Year: 2025, Volume and Issue: unknown, P. 162926 - 162926

Published: April 1, 2025

Language: Английский

Citations

1

Gold Nanoparticle-Coated Magnetic Graphene Oxide as a Dual-Mode Immunochromatographic Biosensor for Enrofloxacin Residue Analysis in Food Samples DOI
Fei Liu, Ragini Singh, Qinghua Zeng

et al.

ACS Applied Nano Materials, Journal Year: 2024, Volume and Issue: 7(9), P. 10144 - 10154

Published: April 23, 2024

Enrofloxacin (ENR) is a commonly used veterinary antibiotic and poses health risk when present as residues in food. This study describes dual-mode immunochromatographic test strip (DITS) biosensor for the detection of ENR Magnetic graphene oxide nanoparticles (MGO-NPs) are two-dimensional magnetic nanomaterials with large specific surface area fine biocompatibility, which can better provide more adsorption points biological antibodies. Gold (AuNPs) stimulate localized plasmon resonance effect under laser irradiation, will increase temperature to achieve photothermal conversion. The conversion efficiency MGO-NPs be effectively enhanced by combining AuNPs form MGO@Au nanocomposites (MGO@Au-NCs). Then, MGO@Au-NCs were combined an monoclonal antibody MGO@Au@Ab probe, MGO@Au@Ab-DITS was developed. employed assess samples spanning concentrations from 0 1000 μg/mL. Sample solutions containing mixed solution, deposited on strip's sample pad, analyzed using both colorimetric methods employing 808 nm infrared imaging instrument. results show that sensitivity mode sensor 0.0159°C whereas, standard deviation (SD) limit (LOD) 0.058 10.89 μg/mL, respectively quantification (LOQ) 36.31 In mode, developed 5.222 au, SD, LOD LOQ 40.13, 23.05 and76.85 respectively. innovative system has been applied detect food such juice milk, laying groundwork other drug

Language: Английский

Citations

7

Truncations and in silico docking to enhance the analytical response of aptamer-based biosensors DOI Creative Commons

Minh-Dat Nguyen,

Meghan Osborne,

Guy Terence Prevot

et al.

Biosensors and Bioelectronics, Journal Year: 2024, Volume and Issue: 265, P. 116680 - 116680

Published: Aug. 22, 2024

Aptamers are short oligonucleotides capable of binding specifically to various targets (i.e., small molecules, proteins, and whole cells) which have been introduced in biosensors such as the electrochemical aptamer-based (E-AB) sensing platform. E-AB sensors comprised a redox-reporter-modified aptamer attached an electrode that undergoes, upon target addition, binding-induced change electron transfer rates. To date, faced limitation translatability aptamers into platform presumably because sequences obtained from Systematic Evolution Ligands by Exponential Enrichment (SELEX) typically long (>80 nucleotides) obtaining structural information remains time resource consuming. In response, we explore utility base truncations silico docking improve their sensors. Here, first apply this glucose aptamer, characterize solution using NMR methods guide design translate truncated variants biosensors. We further investigated applicability truncation computational approaches four other systems (vancomycin, cocaine, methotrexate theophylline) derived functional foresee our strategy will increase success rate translating platforms afford low-cost measurements molecules directly undiluted complex matrices.

Language: Английский

Citations

5

Selection of biofilm-inhibiting ssDNA aptamers against antibiotic-resistant Edwardsiella tarda by inhibition-SELEX and interaction with their binding proteins DOI

Yunting Fan,

Jiang Zheng,

Ying Tan

et al.

International Journal of Biological Macromolecules, Journal Year: 2025, Volume and Issue: unknown, P. 140041 - 140041

Published: Jan. 1, 2025

Language: Английский

Citations

0

Multi-group structure analysis and molecular docking of aptamers and small molecules: a case study of chloramphenicol DOI
Chien‐Chung Fu, Zhaoyuan He,

Tian Liu

et al.

Biochemical and Biophysical Research Communications, Journal Year: 2025, Volume and Issue: 750, P. 151387 - 151387

Published: Jan. 27, 2025

Language: Английский

Citations

0

Forsythoside B activates Siglec-14 to inhibit HIV-1 replication via the JAK1/STAT1 pathway DOI
Shanshan Chen, Xiaopeng Hu, F. Chen

et al.

International Journal of Biological Macromolecules, Journal Year: 2025, Volume and Issue: 303, P. 140632 - 140632

Published: Feb. 3, 2025

Language: Английский

Citations

0

Rapid Biosensors of Antibiotics Based on Multiple Molecular Recognition Elements DOI
Feng Guo, Keren Chen, Jiaru Yang

et al.

Analytical Methods, Journal Year: 2025, Volume and Issue: unknown

Published: Jan. 1, 2025

The extensive use of antibiotics poses significant public health concerns, including the increase in drug-resistant bacteria and environmental pollution, underscoring urgent need for rapid, sensitive, specific antibiotic detection methods. Most current reviews on primarily focus categorizing based their types or classification sensors used, such as electrochemical, optical, colorimetric sensors. In contrast, this review proposes a novel systematic theoretical framework using seven popular molecular recognition elements-antibodies, aptamers, microorganisms, cells, peptides, molecularly imprinted polymers (MIPs), metal-organic frameworks (MOFs) direct modalities briefly discusses mechanism elements recognition. Additionally, it explores biosensors developed these elements, offering detailed analysis strengths limitations terms sensitivity, specificity, practicality. concludes by addressing challenges future directions, providing comprehensive perspective essential enhancing food safety protecting health.

Language: Английский

Citations

0

Sandwich-type electrochemical aptamer-based sensor for rapid nanomolar detection of anesthetic drug procaine in biofluids DOI
Yu Xie,

Jiawen Yin,

Fei Deng

et al.

Microchemical Journal, Journal Year: 2025, Volume and Issue: unknown, P. 113147 - 113147

Published: Feb. 1, 2025

Language: Английский

Citations

0

Study of the Interaction of the Aptamer Cz12 with Albendazole Sulfoxide by Molecular Docking and Uv-Vis-Nir Spectroscopy DOI
Carlos A. Molina, Mary Carmen Licuona Puma, Yulán Hernández

et al.

Published: Jan. 1, 2025

Language: Английский

Citations

0

A label-free fluorescent aptasensor for AFB1 and AFM1 based on the aptamer tailoring strategy and synergistic signal amplification of HCR and MoS2 nanosheets DOI
Yi‐Feng Lan,

Yingqi Ma,

Yingwen Xu

et al.

Sensors and Actuators B Chemical, Journal Year: 2025, Volume and Issue: 434, P. 137591 - 137591

Published: March 13, 2025

Language: Английский

Citations

0