An experimental framework to assess biomolecular condensates in bacteria DOI Creative Commons
Y Hoang, Christopher A. Azaldegui,

Rachel Dow

et al.

Nature Communications, Journal Year: 2024, Volume and Issue: 15(1)

Published: April 15, 2024

Abstract High-resolution imaging of biomolecular condensates in living cells is essential for correlating their properties to those observed through vitro assays. However, such experiments are limited bacteria due resolution limitations. Here we present an experimental framework that probes the formation, reversibility, and dynamics condensate-forming proteins Escherichia coli as a means determine nature bacteria. We demonstrate form after passing threshold concentration, maintain soluble fraction, dissolve upon shifts temperature exhibit consistent with internal rearrangement exchange between condensed fractions. also discover established marker insoluble protein aggregates, IbpA, has different colocalization patterns bacterial demonstrating its potential applicability reporter differentiate two vivo. Overall, this provides generalizable, accessible, rigorous set probe on sub-micron scale cells.

Language: Английский

RNA-Mediated Feedback Control of Transcriptional Condensates DOI Creative Commons
Jonathan E. Henninger, Ozgur Oksuz, Krishna Shrinivas

et al.

Cell, Journal Year: 2020, Volume and Issue: 184(1), P. 207 - 225.e24

Published: Dec. 16, 2020

Language: Английский

Citations

453

The relationship between genome structure and function DOI
A. Marieke Oudelaar, Douglas R. Higgs

Nature Reviews Genetics, Journal Year: 2020, Volume and Issue: 22(3), P. 154 - 168

Published: Nov. 24, 2020

Language: Английский

Citations

249

Biomolecular Condensates and Cancer DOI Creative Commons
Ann Boija, Isaac A. Klein,

Richard A. Young

et al.

Cancer Cell, Journal Year: 2021, Volume and Issue: 39(2), P. 174 - 192

Published: Jan. 9, 2021

Language: Английский

Citations

242

Modulating biomolecular condensates: a novel approach to drug discovery DOI Creative Commons
Diana M. Mitrea, Matthäus Mittasch, Beatriz Ferreira Gomes

et al.

Nature Reviews Drug Discovery, Journal Year: 2022, Volume and Issue: 21(11), P. 841 - 862

Published: Aug. 16, 2022

In the past decade, membraneless assemblies known as biomolecular condensates have been reported to play key roles in many cellular functions by compartmentalizing specific proteins and nucleic acids subcellular environments with distinct properties. Furthermore, growing evidence supports view that often form phase separation, which a single-phase system demixes into two-phase consisting of condensed dilute particular biomolecules. Emerging understanding condensate function normal aberrant states, mechanisms formation, is providing new insights human disease revealing novel therapeutic opportunities. this Perspective, we propose such could enable previously unexplored drug discovery approach based on identifying condensate-modifying therapeutics (c-mods), discuss strategies, techniques challenges involved.

Language: Английский

Citations

232

Nuclear compartmentalization as a mechanism of quantitative control of gene expression DOI
Prashant Bhat, Drew D. Honson, Mitchell Guttman

et al.

Nature Reviews Molecular Cell Biology, Journal Year: 2021, Volume and Issue: 22(10), P. 653 - 670

Published: Aug. 2, 2021

Language: Английский

Citations

199

The Mediator complex as a master regulator of transcription by RNA polymerase II DOI Open Access
William F. Richter, Shraddha Nayak, Janet Iwasa

et al.

Nature Reviews Molecular Cell Biology, Journal Year: 2022, Volume and Issue: 23(11), P. 732 - 749

Published: June 20, 2022

Language: Английский

Citations

198

Biomarkers of aging DOI Open Access

Hainan Bao,

Jiani Cao, Mengting Chen

et al.

Science China Life Sciences, Journal Year: 2023, Volume and Issue: 66(5), P. 893 - 1066

Published: April 11, 2023

Language: Английский

Citations

197

Functional partitioning of transcriptional regulators by patterned charge blocks DOI Creative Commons
Heankel Lyons,

Reshma T Veettil,

Prashant Pradhan

et al.

Cell, Journal Year: 2023, Volume and Issue: 186(2), P. 327 - 345.e28

Published: Jan. 1, 2023

Language: Английский

Citations

189

Liquid–liquid phase separation in tumor biology DOI Creative Commons

Xuhui Tong,

Rong Tang, Jin Xu

et al.

Signal Transduction and Targeted Therapy, Journal Year: 2022, Volume and Issue: 7(1)

Published: July 8, 2022

Abstract Liquid–liquid phase separation (LLPS) is a novel principle for explaining the precise spatial and temporal regulation in living cells. LLPS compartmentalizes proteins nucleic acids into micron-scale, liquid-like, membraneless bodies with specific functions, which were recently termed biomolecular condensates. Biomolecular condensates are executors underlying intracellular spatiotemporal coordination of various biological activities, including chromatin organization, genomic stability, DNA damage response repair, transcription, signal transduction. Dysregulation these cellular processes key event initiation and/or evolution cancer, emerging evidence has linked formation to malignant transformations tumor biology. In this review, we comprehensively summarize detailed mechanisms condensate biophysical function review recent major advances toward elucidating multiple involved cancer cell pathology driven by aberrant LLPS. addition, discuss therapeutic perspectives research most developed drug candidates targeting modulation that can be used combat tumorigenesis.

Language: Английский

Citations

136

Conformational ensembles of the human intrinsically disordered proteome DOI
Giulio Tesei, Anna Ida Trolle, Nicolas Jonsson

et al.

Nature, Journal Year: 2024, Volume and Issue: 626(8000), P. 897 - 904

Published: Jan. 31, 2024

Language: Английский

Citations

133