npj Computational Materials,
Journal Year:
2021,
Volume and Issue:
7(1)
Published: Oct. 15, 2021
Machine
learning
potentials
have
emerged
as
a
powerful
tool
to
extend
the
time
and
length
scales
of
first
principles-quality
simulations.
Still,
most
machine
cannot
distinguish
different
electronic
spin
orientations
thus
are
not
applicable
materials
in
magnetic
states.
Here,
we
propose
spin-dependent
atom-centered
symmetry
functions
new
type
descriptor
taking
atomic
degrees
freedom
into
account.
When
used
input
for
high-dimensional
neural
network
potential
(HDNNP),
accurate
energy
surfaces
multicomponent
systems
describing
multiple
states
can
be
constructed.
We
demonstrate
performance
these
HDNNPs
case
manganese
oxide,
MnO.
show
that
method
predicts
magnetically
distorted
rhombohedral
structure
excellent
agreement
with
density
functional
theory
experiment.
Its
efficiency
allows
determine
N\'{e}el
temperature
considering
structural
fluctuations,
entropic
effects,
defects.
The
is
general
expected
useful
also
other
types
like
oligonuclear
transition
metal
complexes.
Chemical Reviews,
Journal Year:
2021,
Volume and Issue:
121(16), P. 10142 - 10186
Published: March 11, 2021
In
recent
years,
the
use
of
machine
learning
(ML)
in
computational
chemistry
has
enabled
numerous
advances
previously
out
reach
due
to
complexity
traditional
electronic-structure
methods.
One
most
promising
applications
is
construction
ML-based
force
fields
(FFs),
with
aim
narrow
gap
between
accuracy
ab
initio
methods
and
efficiency
classical
FFs.
The
key
idea
learn
statistical
relation
chemical
structure
potential
energy
without
relying
on
a
preconceived
notion
fixed
bonds
or
knowledge
about
relevant
interactions.
Such
universal
ML
approximations
are
principle
only
limited
by
quality
quantity
reference
data
used
train
them.
This
review
gives
an
overview
ML-FFs
insights
that
can
be
obtained
from
core
concepts
underlying
described
detail,
step-by-step
guide
for
constructing
testing
them
scratch
given.
text
concludes
discussion
challenges
remain
overcome
next
generation
ML-FFs.
npj Computational Materials,
Journal Year:
2021,
Volume and Issue:
7(1)
Published: Nov. 15, 2021
Abstract
Graph
neural
networks
(GNN)
have
been
shown
to
provide
substantial
performance
improvements
for
atomistic
material
representation
and
modeling
compared
with
descriptor-based
machine
learning
models.
While
most
existing
GNN
models
predictions
are
based
on
atomic
distance
information,
they
do
not
explicitly
incorporate
bond
angles,
which
critical
distinguishing
many
structures.
Furthermore,
properties
known
be
sensitive
slight
changes
in
angles.
We
present
an
Atomistic
Line
Neural
Network
(ALIGNN),
a
architecture
that
performs
message
passing
both
the
interatomic
graph
its
line
corresponding
demonstrate
angle
information
can
efficiently
included,
leading
improved
multiple
prediction
tasks.
ALIGNN
predicting
52
solid-state
molecular
available
JARVIS-DFT,
Materials
project,
QM9
databases.
outperform
some
previously
reported
tasks
better
or
comparable
model
training
speed.
Communications Materials,
Journal Year:
2022,
Volume and Issue:
3(1)
Published: Nov. 26, 2022
Abstract
Machine
learning
plays
an
increasingly
important
role
in
many
areas
of
chemistry
and
materials
science,
being
used
to
predict
properties,
accelerate
simulations,
design
new
structures,
synthesis
routes
materials.
Graph
neural
networks
(GNNs)
are
one
the
fastest
growing
classes
machine
models.
They
particular
relevance
for
as
they
directly
work
on
a
graph
or
structural
representation
molecules
therefore
have
full
access
all
relevant
information
required
characterize
In
this
Review,
we
provide
overview
basic
principles
GNNs,
widely
datasets,
state-of-the-art
architectures,
followed
by
discussion
wide
range
recent
applications
GNNs
concluding
with
road-map
further
development
application
GNNs.
Chemical Reviews,
Journal Year:
2020,
Volume and Issue:
121(16), P. 9873 - 9926
Published: Nov. 19, 2020
Electronically
excited
states
of
molecules
are
at
the
heart
photochemistry,
photophysics,
as
well
photobiology
and
also
play
a
role
in
material
science.
Their
theoretical
description
requires
highly
accurate
quantum
chemical
calculations,
which
computationally
expensive.
In
this
review,
we
focus
on
not
only
how
machine
learning
is
employed
to
speed
up
such
excited-state
simulations
but
branch
artificial
intelligence
can
be
used
advance
exciting
research
field
all
its
aspects.
Discussed
applications
for
include
dynamics
simulations,
static
calculations
absorption
spectra,
many
others.
order
put
these
studies
into
context,
discuss
promises
pitfalls
involved
techniques.
Since
latter
mostly
based
chemistry
provide
short
introduction
electronic
structure
methods
approaches
nonadiabatic
describe
tricks
problems
when
using
them
molecules.
Chemical Reviews,
Journal Year:
2021,
Volume and Issue:
121(16), P. 10218 - 10239
Published: June 7, 2021
Machine
learning
(ML)
techniques
applied
to
chemical
reactions
have
a
long
history.
The
present
contribution
discusses
applications
ranging
from
small
molecule
reaction
dynamics
computational
platforms
for
planning.
ML-based
can
be
particularly
relevant
problems
involving
both
computation
and
experiments.
For
one,
Bayesian
inference
is
powerful
approach
develop
models
consistent
with
knowledge
Second,
methods
also
used
handle
that
are
formally
intractable
using
conventional
approaches,
such
as
exhaustive
characterization
of
state-to-state
information
in
reactive
collisions.
Finally,
the
explicit
simulation
networks
they
occur
combustion
has
become
possible
machine-learned
neural
network
potentials.
This
review
provides
an
overview
questions
been
addressed
machine
techniques,
outlook
challenges
this
diverse
stimulating
field.
It
concluded
ML
chemistry
practiced
conceived
today
potential
transform
way
which
field
approaches
reactions,
research
academic
teaching.
Journal of the American Chemical Society,
Journal Year:
2020,
Volume and Issue:
142(48), P. 20273 - 20287
Published: Nov. 10, 2020
Developing
algorithmic
approaches
for
the
rational
design
and
discovery
of
materials
can
enable
us
to
systematically
find
novel
materials,
which
have
huge
technological
social
impact.
However,
such
requires
a
holistic
perspective
over
full
multistage
process,
involves
exploring
immense
spaces,
their
properties,
process
engineering
as
well
techno-economic
assessment.
The
complexity
all
these
options
using
conventional
scientific
seems
intractable.
Instead,
tools
from
field
machine
learning
potentially
solve
some
our
challenges
on
way
design.
Here
we
review
chief
advancements
methods
applications
in
design,
followed
by
discussion
main
opportunities
currently
face
together
with
future
discovery.
Chemical Reviews,
Journal Year:
2020,
Volume and Issue:
121(16), P. 10187 - 10217
Published: Oct. 6, 2020
We
review
progress
in
neural
network
(NN)-based
methods
for
the
construction
of
interatomic
potentials
from
discrete
samples
(such
as
ab
initio
energies)
applications
classical
and
quantum
dynamics
including
reaction
computational
spectroscopy.
The
main
focus
is
on
building
molecular
potential
energy
surfaces
(PES)
internal
coordinates
that
explicitly
include
all
many-body
contributions,
even
though
some
we
limit
degree
coupling,
due
either
to
a
desire
cost
or
limited
data.
Explicit
direct
treatment
contributions
only
practical
sufficiently
small
molecules,
which
are
therefore
our
primary
focus.
This
includes
molecules
surfaces.
consider
direct,
single
NN
PES
fitting
well
more
complex
impose
structure
multibody
representation)
function,
through
architecture
one
by
using
multiple
NNs.
show
how
NNs
effective
representations
with
low-dimensional
functions
dimensionality
reduction.
NN-based
approaches
build
PESs
sums-of-product
form
important
dynamics,
ways
treat
symmetry,
issues
related
sampling
data
distributions
relation
between
errors
observables.
highlight
combinations
other
ideas
such
permutationally
invariant
polynomials
sums
environment-dependent
atomic
have
recently
emerged
powerful
tools
highly
accurate
relatively
large
reactive
systems.
The Journal of Chemical Physics,
Journal Year:
2021,
Volume and Issue:
154(23)
Published: June 21, 2021
Machine
learning
(ML)
methods
are
being
used
in
almost
every
conceivable
area
of
electronic
structure
theory
and
molecular
simulation.
In
particular,
ML
has
become
firmly
established
the
construction
high-dimensional
interatomic
potentials.
Not
a
day
goes
by
without
another
proof
principle
published
on
how
can
represent
predict
quantum
mechanical
properties-be
they
observable,
such
as
polarizabilities,
or
not,
atomic
charges.
As
is
becoming
pervasive
simulation,
we
provide
an
overview
atomistic
computational
modeling
transformed
incorporation
approaches.
From
perspective
practitioner
field,
assess
common
workflows
to
structure,
dynamics,
spectroscopy
affected
ML.
Finally,
discuss
tighter
lasting
integration
with
chemistry
materials
science
be
achieved
what
it
will
mean
for
research
practice,
software
development,
postgraduate
training.
Journal of Chemical Theory and Computation,
Journal Year:
2023,
Volume and Issue:
19(20), P. 6933 - 6991
Published: May 22, 2023
The
developments
of
the
open-source
OpenMolcas
chemistry
software
environment
since
spring
2020
are
described,
with
a
focus
on
novel
functionalities
accessible
in
stable
branch
package
or
via
interfaces
other
packages.
These
span
wide
range
topics
computational
and
presented
thematic
sections:
electronic
structure
theory,
spectroscopy
simulations,
analytic
gradients
molecular
optimizations,
ab
initio
dynamics,
new
features.
This
report
offers
an
overview
chemical
phenomena
processes
can
address,
while
showing
that
is
attractive
platform
for
state-of-the-art
atomistic
computer
simulations.