International Journal of Molecular Sciences,
Journal Year:
2023,
Volume and Issue:
24(5), P. 4839 - 4839
Published: March 2, 2023
The
COVID-19
pandemic
has
caused
millions
of
deaths
and
remains
a
major
public
health
burden
worldwide.
Previous
studies
found
that
large
number
patients
survivors
developed
neurological
symptoms
might
be
at
high
risk
neurodegenerative
diseases,
such
as
Alzheimer’s
disease
(AD)
Parkinson’s
(PD).
We
aimed
to
explore
the
shared
pathways
between
COVID-19,
AD,
PD
by
using
bioinformatic
analysis
reveal
potential
mechanisms,
which
may
explain
degeneration
brain
occur
in
patients,
provide
early
intervention.
In
this
study,
gene
expression
datasets
frontal
cortex
were
employed
detect
common
differentially
expressed
genes
(DEGs)
PD.
A
total
52
DEGs
then
examined
functional
annotation,
protein–protein
interaction
(PPI)
construction,
candidate
drug
identification,
regulatory
network
analysis.
involvement
synaptic
vesicle
cycle
down-regulation
synapses
these
three
suggesting
dysfunction
contribute
onset
progress
diseases
COVID-19.
Five
hub
one
key
module
obtained
from
PPI
network.
Moreover,
5
drugs
42
transcription
factors
(TFs)
also
identified
on
datasets.
conclusion,
results
our
study
new
insights
directions
for
follow-up
relationship
diseases.
we
promising
treatment
strategies
prevent
developing
disorders.
Neuron,
Journal Year:
2024,
Volume and Issue:
112(10), P. 1657 - 1675.e10
Published: April 3, 2024
Astrocytes
strongly
promote
the
formation
and
maturation
of
synapses
by
secreted
proteins.
Several
astrocyte-secreted
synaptogenic
proteins
controlling
excitatory
synapse
development
were
identified;
however,
those
that
induce
inhibitory
synaptogenesis
remain
elusive.
Here,
we
identify
neurocan
as
an
protein.
After
secretion
from
astrocytes,
is
cleaved
into
N-
C-terminal
fragments.
We
found
these
fragments
have
distinct
localizations
in
extracellular
matrix.
The
fragment
localizes
to
controls
cortical
function.
Neurocan
knockout
mice
lacking
whole
protein
or
only
its
domain
reduced
numbers
Through
super-resolution
microscopy,
vivo
proximity
labeling
TurboID,
astrocyte-specific
rescue
approaches,
discovered
somatostatin-positive
regulates
their
formation.
Together,
our
results
unveil
a
mechanism
through
which
astrocytes
control
circuit-specific
mammalian
brain.
Nature Biotechnology,
Journal Year:
2024,
Volume and Issue:
unknown
Published: April 2, 2024
A
key
challenge
of
analyzing
data
from
high-resolution
spatial
profiling
technologies
is
to
suitably
represent
the
features
cellular
neighborhoods
or
niches.
Here
we
introduce
covariance
environment
(COVET),
a
representation
that
leverages
gene-gene
covariate
structure
across
cells
in
niche
capture
multivariate
nature
interactions
within
it.
We
define
principled
optimal
transport-based
distance
metric
between
COVET
niches
scales
millions
cells.
Using
encode
context,
developed
environmental
variational
inference
(ENVI),
conditional
autoencoder
jointly
embeds
and
single-cell
RNA
sequencing
into
latent
space.
ENVI
includes
two
decoders:
one
impute
gene
expression
modality
second
project
information
onto
data.
can
confer
context
genomics
single
dissociated
outperforms
alternatives
for
imputing
on
diverse
datasets.
Fluids and Barriers of the CNS,
Journal Year:
2022,
Volume and Issue:
19(1)
Published: March 20, 2022
Abstract
Adenylyl
cyclases
(ADCYs),
by
generating
second
messenger
cAMP,
play
important
roles
in
various
cellular
processes.
Their
expression,
regulation
and
functions
the
CNS,
however,
remain
largely
unknown.
In
this
review,
we
first
introduce
classification
structure
of
ADCYs,
followed
a
discussion
mammalian
ADCYs
(ADCY1-10).
Next,
expression
function
each
ADCY
isoform
are
summarized
region/cell-specific
manner.
Furthermore,
effects
GPCR-ADCY
signaling
on
blood–brain
barrier
(BBB)
integrity
reviewed.
Last,
current
challenges
future
directions
discussed.
We
aim
to
provide
succinct
review
foster
new
research
future.
Frontiers in Neural Circuits,
Journal Year:
2022,
Volume and Issue:
16
Published: June 21, 2022
Neuropeptides,
a
diverse
class
of
signaling
molecules
in
the
nervous
system,
modulate
various
biological
effects
including
membrane
excitability,
synaptic
transmission
and
synaptogenesis,
gene
expression,
glial
cell
architecture
function.
To
date,
most
what
is
known
about
neuropeptide
action
limited
to
subcortical
brain
structures
tissue
outside
central
system.
Thus,
there
knowledge
gap
our
understanding
function
within
cortical
circuits.
In
this
review,
we
provide
comprehensive
overview
families
neuropeptides
their
cognate
receptors
that
are
expressed
prefrontal
cortex
(PFC).
Specifically,
highlight
dynorphin,
enkephalin,
corticotropin-releasing
factor,
cholecystokinin,
somatostatin,
Y,
vasoactive
intestinal
peptide.
Further,
review
implication
circuit
use
as
potential
therapeutic
targets.
Together,
summarizes
established
highlights
unknowns
modulation
neural
underlying
while
offering
insights
for
future
research.
An
increased
emphasis
area
study
necessary
elucidate
basic
principles
used
circuits
beyond
fast
excitatory
inhibitory
transmitters
well
consider
components
PFC
target
neurological
disorders.
Therefore,
not
only
sheds
light
on
importance
studies,
but
also
provides
serve
roadmap
studies
field.
Biomolecules,
Journal Year:
2022,
Volume and Issue:
12(2), P. 312 - 312
Published: Feb. 15, 2022
Despite
the
obvious
differences
in
pathophysiology
of
distinct
neuropsychiatric
diseases
or
neurodegenerative
disorders,
some
them
share
general
but
pivotal
mechanisms,
one
which
is
disruption
excitation/inhibition
balance.
Such
an
imbalance
can
be
generated
by
changes
inhibitory
system,
very
often
mediated
somatostatin-containing
interneurons
(SOM-INs).
In
physiology,
this
group
interneurons,
as
well
somatostatin
itself,
profoundly
shapes
brain
activity,
thus
influencing
behavior
and
plasticity;
however,
number,
density
activity
SOM-INs
levels
are
found
throughout
many
neurological
conditions,
both
patients
animal
models.
Here,
we
(1)
briefly
describe
somatostatinergic
characterizing
neuropeptide
its
receptors
functions,
physiology
circuitry
SOM-INs;
(2)
summarize
effects
physiological
processes
pathological
focusing
primarily
on
learning-induced
plasticity
encompassing
selected
neuropsychological
respectively.
The
presented
data
indicate
somatostatinergic-system-mediated
inhibition
a
substantial
factor
mechanisms
neuroplasticity,
disrupted
plethora
pathologies.
PLoS Computational Biology,
Journal Year:
2023,
Volume and Issue:
19(4), P. e1010986 - e1010986
Published: April 10, 2023
Reduced
cortical
inhibition
by
somatostatin-expressing
(SST)
interneurons
has
been
strongly
associated
with
treatment-resistant
depression.
However,
due
to
technical
limitations
it
is
impossible
establish
experimentally
in
humans
whether
the
effects
of
reduced
SST
interneuron
on
microcircuit
activity
have
signatures
detectable
clinically-relevant
brain
signals
such
as
electroencephalography
(EEG).
To
overcome
these
limitations,
we
simulated
resting-state
and
EEG
using
detailed
models
human
microcircuits
normal
(healthy)
or
(depression),
found
that
depression
exhibited
increased
theta,
alpha
low
beta
power
(4–16
Hz).
The
changes
involved
a
combination
an
aperiodic
broadband
periodic
theta
components.
We
then
demonstrated
specificity
showing
they
were
distinct
from
those
corresponding
parvalbumin-expressing
(PV)
inhibition.
Our
study
thus
links
level
features
microcircuits,
which
can
serve
better
identify
mechanistic
subtypes
EEG,
non-invasively
monitor
modulation
Scientific Reports,
Journal Year:
2023,
Volume and Issue:
13(1)
Published: Jan. 12, 2023
Abstract
Alzheimer’s
disease
(AD)
is
the
leading
cause
of
dementia
in
aged
population.
Oxidative
stress
and
neuroinflammation
play
important
roles
pathogenesis
AD.
Investigation
hub
genes
for
development
potential
therapeutic
targets
candidate
biomarkers
warranted.
The
differentially
expressed
(DEGs)
AD
were
screened
GSE48350
dataset.
oxidative
(DEOSGs)
analyzed
by
intersection
DEGs
stress-related
genes.
immune-related
DEOSGs
identified
weighted
gene
co-expression
network
analysis
(WGCNA)
protein–protein
interaction
(PPI)
analysis,
respectively.
Enrichment
was
performed
Gene
Ontology
Kyoto
Encyclopedia
Genes
Genomes.
diagnostic
value
assessed
receiver
operating
characteristic
validated
GSE1297.
mRNA
expression
determined
qRT-PCR
analysis.
Finally,
we
constructed
drug,
transcription
factors
(TFs),
microRNA
A
total
1160
(259
up-regulated
901
down-regulated)
GSE48350.
Among
them
111
Thereafter,
significant
difference
infiltrated
immune
cells
(effector
memory
CD8
T
cell,
activated
B
natural
killer
CD56
bright
plasmacytoid
dendritic
neutrophil)
between
control
samples.
27
modules
obtained
through
WGCNA
turquoise
module
most
relevant
module.
We
66
intersecting
with
15
PPI
them,
9
(CCK,
CNR1,
GAD1,
GAP43,
NEFL,
NPY,
PENK,
SST,
TAC1)
good
values
verified
revealed
downregulation
CCK,
PENK
upregulation
NEFL
76
agents,
152
miRNAs
targets,
91
TFs
regulatory
networks.
Our
study
key
associated
reaction
pathogenesis.
findings
may
help
to
provide
promising