Scientific Reports,
Journal Year:
2024,
Volume and Issue:
14(1)
Published: Jan. 11, 2024
Abstract
Machine
learning
(ML)
techniques
have
gained
popularity
in
the
neuroimaging
field
due
to
their
potential
for
classifying
neuropsychiatric
disorders.
However,
diagnostic
predictive
power
of
existing
algorithms
has
been
limited
by
small
sample
sizes,
lack
representativeness,
data
leakage,
and/or
overfitting.
Here,
we
overcome
these
limitations
with
largest
multi-site
size
date
(N
=
5365)
provide
a
generalizable
ML
classification
benchmark
major
depressive
disorder
(MDD)
using
shallow
linear
and
non-linear
models.
Leveraging
brain
measures
from
standardized
ENIGMA
analysis
pipelines
FreeSurfer,
were
able
classify
MDD
versus
healthy
controls
(HC)
balanced
accuracy
around
62%.
But
after
harmonizing
data,
e.g.,
ComBat,
dropped
approximately
52%.
Accuracy
results
close
random
chance
levels
also
observed
stratified
groups
according
age
onset,
antidepressant
use,
number
episodes
sex.
Future
studies
incorporating
higher
dimensional
imaging/phenotype
features,
more
advanced
machine
deep
methods
may
yield
encouraging
prospects.
Translational Psychiatry,
Journal Year:
2020,
Volume and Issue:
10(1)
Published: March 20, 2020
Abstract
This
review
summarizes
the
last
decade
of
work
by
ENIGMA
(
E
nhancing
N
euro
I
maging
G
enetics
through
M
eta
A
nalysis)
Consortium,
a
global
alliance
over
1400
scientists
across
43
countries,
studying
human
brain
in
health
and
disease.
Building
on
large-scale
genetic
studies
that
discovered
first
robustly
replicated
loci
associated
with
metrics,
has
diversified
into
50
working
groups
(WGs),
pooling
worldwide
data
expertise
to
answer
fundamental
questions
neuroscience,
psychiatry,
neurology,
genetics.
Most
WGs
focus
specific
psychiatric
neurological
conditions,
other
study
normal
variation
due
sex
gender
differences,
or
development
aging;
still
develop
methodological
pipelines
tools
facilitate
harmonized
analyses
“big
data”
(i.e.,
epigenetic
data,
multimodal
MRI,
electroencephalography
data).
These
international
efforts
have
yielded
largest
neuroimaging
date
schizophrenia,
bipolar
disorder,
major
depressive
post-traumatic
stress
substance
use
disorders,
obsessive-compulsive
attention-deficit/hyperactivity
autism
spectrum
epilepsy,
22q11.2
deletion
syndrome.
More
recent
formed
anxiety
suicidal
thoughts
behavior,
sleep
insomnia,
eating
irritability,
injury,
antisocial
personality
conduct
dissociative
identity
disorder.
Here,
we
summarize
ENIGMA’s
activities
ongoing
projects,
describe
successes
challenges
encountered
along
way.
We
highlight
advantages
collaborative
coordinated
for
testing
reproducibility
robustness
findings,
offering
opportunity
identify
systems
involved
clinical
syndromes
diverse
samples
genetic,
environmental,
demographic,
cognitive,
psychosocial
factors.
Neuroscience Bulletin,
Journal Year:
2021,
Volume and Issue:
37(6), P. 863 - 880
Published: Feb. 13, 2021
Major
depressive
disorder
(MDD),
also
referred
to
as
depression,
is
one
of
the
most
common
psychiatric
disorders
with
a
high
economic
burden.
The
etiology
depression
still
not
clear,
but
it
generally
believed
that
MDD
multifactorial
disease
caused
by
interaction
social,
psychological,
and
biological
aspects.
Therefore,
there
no
exact
pathological
theory
can
independently
explain
its
pathogenesis,
involving
genetics,
neurobiology,
neuroimaging.
At
present,
are
many
treatment
measures
for
patients
including
drug
therapy,
psychotherapy,
neuromodulation
technology.
In
recent
years,
great
progress
has
been
made
in
development
new
antidepressants,
some
which
have
applied
clinic.
This
article
mainly
reviews
research
progress,
MDD.
Translational Psychiatry,
Journal Year:
2020,
Volume and Issue:
10(1)
Published: May 29, 2020
Abstract
A
key
objective
in
the
field
of
translational
psychiatry
over
past
few
decades
has
been
to
identify
brain
correlates
major
depressive
disorder
(MDD).
Identifying
measurable
indicators
processes
associated
with
MDD
could
facilitate
detection
individuals
at
risk,
and
development
novel
treatments,
monitoring
treatment
effects,
predicting
who
might
benefit
most
from
treatments
that
target
specific
mechanisms.
However,
despite
intensive
neuroimaging
research
towards
this
effort,
underpowered
studies
a
lack
reproducible
findings
have
hindered
progress.
Here,
we
discuss
work
ENIGMA
Major
Depressive
Disorder
(MDD)
Consortium,
which
was
established
address
issues
poor
replication,
unreliable
results,
overestimation
effect
sizes
previous
studies.
The
Consortium
currently
includes
data
45
study
cohorts
14
countries
across
six
continents.
primary
aim
is
structural
functional
alterations
can
be
reliably
detected
replicated
worldwide.
secondary
goal
investigate
how
demographic,
genetic,
clinical,
psychological,
environmental
factors
affect
these
associations.
In
review,
summarize
disease
working
group
date
future
directions.
We
also
highlight
challenges
benefits
large-scale
sharing
for
mental
health
research.
EBioMedicine,
Journal Year:
2021,
Volume and Issue:
72, P. 103600 - 103600
Published: Oct. 1, 2021
The
rise
of
machine
learning
has
unlocked
new
ways
analysing
structural
neuroimaging
data,
including
brain
age
prediction.
In
this
state-of-the-art
review,
we
provide
an
introduction
to
the
methods
and
potential
clinical
applications
Studies
on
typically
involve
creation
a
regression
model
age-related
neuroanatomical
changes
in
healthy
people.
This
is
then
applied
subjects
predict
their
age.
difference
between
predicted
chronological
given
individual
known
as
'brain-age
gap'.
value
thought
reflect
abnormalities
may
be
marker
overall
health.
It
aid
early
detection
brain-based
disorders
support
differential
diagnosis,
prognosis,
treatment
choices.
These
could
lead
more
timely
targeted
interventions
disorders.
Human Brain Mapping,
Journal Year:
2022,
Volume and Issue:
43(10), P. 3113 - 3129
Published: March 21, 2022
Abstract
Estimating
age
based
on
neuroimaging‐derived
data
has
become
a
popular
approach
to
developing
markers
for
brain
integrity
and
health.
While
variety
of
machine‐learning
algorithms
can
provide
accurate
predictions
characteristics,
there
is
significant
variation
in
model
accuracy
reported
across
studies.
We
predicted
two
population‐based
datasets,
assessed
the
effects
range,
sample
size
age‐bias
correction
performance
metrics
Pearson's
correlation
coefficient
(
r
),
determination
R
2
Root
Mean
Squared
Error
(RMSE)
Absolute
(MAE).
The
results
showed
that
these
vary
considerably
depending
cohort
range;
values
are
lower
when
measured
samples
with
narrower
range.
RMSE
MAE
also
range
due
smaller
errors/brain
delta
closer
mean
group.
Across
subsets
different
ranges,
improve
increasing
size.
Performance
further
prediction
variance
as
well
difference
between
training
test
sets,
corrected
indicate
high
accuracy—also
models
showing
poor
initial
performance.
In
conclusion,
used
evaluating
depend
study‐specific
cannot
be
directly
compared
Since
generally
accuracy,
even
poorly
performing
models,
inspection
uncorrected
provides
important
information
about
underlying
attributes
such
variance.
NeuroImage,
Journal Year:
2022,
Volume and Issue:
256, P. 119210 - 119210
Published: April 21, 2022
The
discrepancy
between
chronological
age
and
the
apparent
of
brain
based
on
neuroimaging
data
-
delta
has
emerged
as
a
reliable
marker
health.
With
an
increasing
wealth
data,
approaches
to
tackle
heterogeneity
in
acquisition
are
vital.
To
this
end,
we
compiled
raw
structural
magnetic
resonance
images
into
one
largest
most
diverse
datasets
assembled
(n=53542),
trained
convolutional
neural
networks
(CNNs)
predict
age.
We
achieved
state-of-the-art
performance
unseen
from
unknown
scanners
(n=2553),
showed
that
higher
is
associated
with
diabetes,
alcohol
intake
smoking.
Using
transfer
learning,
intermediate
representations
learned
by
our
model
complemented
partly
outperformed
predicting
common
disorders.
Our
work
shows
can
achieve
generalizable
biologically
plausible
predictions
using
CNNs
heterogeneous
datasets,
them
clinical
use
cases.
Molecular Psychiatry,
Journal Year:
2022,
Volume and Issue:
28(3), P. 1201 - 1209
Published: Dec. 9, 2022
Schizophrenia
(SZ)
is
associated
with
an
increased
risk
of
life-long
cognitive
impairments,
age-related
chronic
disease,
and
premature
mortality.
We
investigated
evidence
for
advanced
brain
ageing
in
adult
SZ
patients,
whether
this
was
clinical
characteristics
a
prospective
meta-analytic
study
conducted
by
the
ENIGMA
Working
Group.
The
included
data
from
26
cohorts
worldwide,
total
2803
patients
(mean
age
34.2
years;
range
18-72
67%
male)
2598
healthy
controls
33.8
years,
18-73
55%
male).
Brain-predicted
individually
estimated
using
model
trained
on
independent
based
68
measures
cortical
thickness
surface
area,
7
subcortical
volumes,
lateral
ventricular
volumes
intracranial
volume,
all
derived
T1-weighted
magnetic
resonance
imaging
(MRI)
scans.
Deviations
trajectory
were
assessed
difference
between
brain-predicted
chronological
(brain-predicted
[brain-PAD]).
On
average,
showed
higher
brain-PAD
+3.55
years
(95%
CI:
2.91,
4.19;
I
Translational Psychiatry,
Journal Year:
2023,
Volume and Issue:
13(1)
Published: May 10, 2023
Abstract
Late-life
depression
occurring
in
older
adults
is
common,
recurrent,
and
malignant.
It
characterized
by
affective
symptoms,
but
also
cognitive
decline,
medical
comorbidity,
physical
disability.
This
behavioral
presentation
results
from
altered
function
of
discrete
functional
brain
networks
circuits.
A
wide
range
factors
across
the
lifespan
contributes
to
fragility
vulnerability
those
dysfunction.
In
many
cases,
these
occur
earlier
life
contribute
adolescent
or
adulthood
depressive
episodes,
where
onset
was
related
adverse
childhood
events,
maladaptive
personality
traits,
reproductive
other
factors.
Other
individuals
exhibit
a
later-life
pro-inflammatory
processes,
cerebrovascular
disease,
developing
neurodegenerative
processes.
These
processes
may
not
only
lead
comorbid
symptoms.
Importantly,
repeated
episodes
themselves
accelerate
aging
process
shifting
allostatic
dysfunctional
states
increasing
load
through
hypothalamic–pituitary–adrenal
axis
inflammatory
Over
time,
this
path
biological
aging,
leading
greater
atrophy,
development
decline
frailty.
unclear
whether
successful
treatment
avoidance
recurrent
would
shift
back
towards
more
normative
trajectory.
However,
current
antidepressant
treatments
good
efficacy
for
adults,
including
pharmacotherapy,
neuromodulation,
psychotherapy,
with
recent
work
areas
providing
new
guidance
on
optimal
approaches.
Moreover,
there
host
nonpharmacological
approaches
being
examined
that
take
advantage
resiliency
decrease
depression.
Thus,
while
late-life
yet
highly
heterogeneous
disorder,
better
phenotypic
characterization
provides
opportunities
utilize
nonspecific
targeted
interventions
can
promote
recovery,
resilience,
maintenance
remission.