Unraveling the dynamic interplay of microbial communities associated to Lupinus angustifolius in response to environmental and cultivation conditions DOI Creative Commons
Maite Ortúzar, Raúl Riesco,

Marco Criado

et al.

The Science of The Total Environment, Journal Year: 2024, Volume and Issue: 946, P. 174277 - 174277

Published: June 27, 2024

Microorganisms form dynamic communities with plants, providing benefits such as nutrient acquisition and stress resilience. Understanding how these microorganisms are affected by environmental factors growth conditions soil characteristics essential for harnessing sustainable agriculture practices their response to climate change. The microbiome associated Lupinus angustifolius, a legume native in Europe, high protein value resilience was characterized the first time. Using 16S rRNA gene ITS amplicon sequencing, we compositional temporal changes of bacterial fungal soil, rhizosphere, plant compartments where angustifolius grows naturally. Our results suggest that main difference microbial is related edaphic properties, although temperature, humidity or rainfall also influenced composition communities. We roots, nodules, leaves wild plants collected field compared them against obtained under greenhouse conditions. In compartments, appeared be more growing (field vs greenhouse), than location. These can used identify key taxa may play crucial roles development adaptation host its microbiota highlight importance characterizing microbiomes natural habitats. Soil, climatic seasons, shapes assembly. recruits core across leaves, stable locations. However, cultivation alter dynamics, impacting adaptability components. Wild show resilient adaptable while germination vulnerability.

Language: Английский

The core metabolome and root exudation dynamics of three phylogenetically distinct plant species DOI Creative Commons
Sarah A. McLaughlin, Kateryna Zhalnina, Suzanne M. Kosina

et al.

Nature Communications, Journal Year: 2023, Volume and Issue: 14(1)

Published: March 24, 2023

Abstract Root exudates are plant-derived, exported metabolites likely shaping root-associated microbiomes by acting as nutrients and signals. However, root exudation dynamics unclear thus also, if changes in reflected microbiome structure. Here, we assess commonalities differences between of different plant species, diurnal dynamics, well the accompanying methodological aspects exudate sampling. We find that should be collected for hours rather than days many metabolite abundances saturate over time. Plant growth sterile, nonsterile, or sugar-supplemented environments significantly alters profiles. A comparison Arabidopsis thaliana , Brachypodium distachyon Medicago truncatula shoot, root, profiles reveals clear these but also a core metabolome tissues exudates. Exudate exhibit signature. These findings add to conceptual groundwork future studies improve understanding plant-microbe interactions.

Language: Английский

Citations

114
Diel Fluctuation of Extracellular Reactive Oxygen Species Production in the Rhizosphere of Rice DOI
Hengyi Dai, Binbin Wu, Baoliang Chen

et al.

Environmental Science & Technology, Journal Year: 2022, Volume and Issue: 56(12), P. 9075 - 9082

Published: May 20, 2022

Reactive oxygen species (ROS) are ubiquitous on earth and drive numerous redox-centered biogeochemical processes. The rhizosphere of wetland plants is a highly dynamic interface for the exchange electrons, presenting basis precedent ROS production, yet whether extracellular produced in remains unknown. Here, we designed microfluidic chip setup to detect in-situ productions rice with spatial temporal resolutions. Fluorescence imaging clearly displayed hot spots generation rhizosphere. formation concentration hydroxyl radical (•OH, representative ROS, 10–6 M) was comparable those by classical photochemical route (10–6–10–7 aquatic systems, therefore highlighting as an unrecognized hotspot production. Moreover, production exhibits diel fluctuation, which simultaneously fluctuated dissolved oxygen, redox potential, pH, all driven radial loss near root daytime. fluctuation were confirmed incubated natural soils. We demonstrated that triggered interplay between root-released microbial respiration released while iron mineral organic matter might play key roles storing shuttling electrons. Our results highlight widespread but previously unappreciated may affect pollutant dynamics processes

Language: Английский

Citations

86
Loss of microbial diversity weakens specific soil functions, but increases soil ecosystem stability DOI

Xueling Yang,

Jie Cheng, Ashley E. Franks

et al.

Soil Biology and Biochemistry, Journal Year: 2022, Volume and Issue: 177, P. 108916 - 108916

Published: Dec. 15, 2022

Language: Английский

Citations

75
Spatiotemporal successions of N, S, C, Fe, and As cycling genes in groundwater of a wetland ecosystem: Enhanced heterogeneity in wet season DOI
Xianglong Chen, Yizhi Sheng, Guangcai Wang

et al.

Water Research, Journal Year: 2024, Volume and Issue: 251, P. 121105 - 121105

Published: Jan. 3, 2024

Language: Английский

Citations

29
Microbiomes in agroecosystem: Diversity, function and assembly mechanisms DOI Creative Commons
Chao Xiong, Yahai Lu

Environmental Microbiology Reports, Journal Year: 2022, Volume and Issue: 14(6), P. 833 - 849

Published: Oct. 2, 2022

Abstract Soils are a main repository of biodiversity harbouring immense diversity microbial species that plays central role in fundamental ecological processes and acts as the seed bank for emergence plant microbiome cropland ecosystems. Crop‐associated microbiomes play an important shaping performance, which includes but not limited to nutrient uptake, disease resistance, abiotic stress tolerance. Although our understanding structure function soil has been rapidly advancing, most knowledge comes from ecosystems natural environment. In this review, we present overview current communities along soil–plant continuum agroecosystems. To characterize mechanisms community assembly crop microbiomes, explore how host environmental factors such developmental stage, pathogen invasion, land management shape structure, co‐occurrence patterns, crop‐microbiome interactions. Particularly, relative importance deterministic stochastic is illustrated under different conditions, potential sources keystone taxa described. Finally, highlight few questions perspectives future research.

Language: Английский

Citations

63
Constructed wetlands treating synthetic wastewater in response to day-night alterations: Performance and mechanisms DOI

Xinyue Zhao,

Juntong Chen,

Mengran Guo

et al.

Chemical Engineering Journal, Journal Year: 2022, Volume and Issue: 446, P. 137460 - 137460

Published: June 11, 2022

Language: Английский

Citations

60
Vertical-scale spatial influence of radial oxygen loss on rhizosphere microbial community in constructed wetland DOI Creative Commons
Shunwen Bai, Juntong Chen,

Mengran Guo

et al.

Environment International, Journal Year: 2022, Volume and Issue: 171, P. 107690 - 107690

Published: Dec. 9, 2022

Complex interactions between plants and microorganisms form the basis of constructed wetlands (CWs) for pollutant removal. In rhizosphere, radial oxygen loss (ROL) plays a key role in activity abundance functional microorganisms. However, little has been done to explore how ROL would influence niche differentiation microbial communities at different vertical spatial scales. We demonstrate that decreases with depth, promoting an oxidation-reduction rhizosphere microecosystem CWs. The high level upper layer could support supply aerobic bacteria (Haliangium), facilitating COD (60%) NH4+-N (50%) removal, whereas enrichment denitrifiers (e.g., Hydrogenophaga Ralstonia) methanotrophs (Methanobaterium) lower stimulate denitrification. function prediction results further certified genes catalyzing nitrifying denitrification processes were significantly enhanced bottom layers, respectively, which was attributed concentration gradient rhizosphere. This study contributes unraveling effect enables improved understanding decontamination mechanisms

Language: Английский

Citations

56
Roles of sunlight exposure on chemosensory characteristic of broad bean paste by untargeted profiling of volatile flavors and multivariate statistical analysis DOI
Shuai Zhao,

Chengtuo Niu,

Xiaohong Yang

et al.

Food Chemistry, Journal Year: 2022, Volume and Issue: 381, P. 132115 - 132115

Published: Jan. 12, 2022

Language: Английский

Citations

45
Root exudation of organic acid anions and recruitment of beneficial actinobacteria facilitate phosphorus uptake by maize in compacted silt loam soil DOI

Fangbo Zhang,

Yuxue Hou,

Zed Rengel

et al.

Soil Biology and Biochemistry, Journal Year: 2023, Volume and Issue: 184, P. 109074 - 109074

Published: June 11, 2023

Language: Английский

Citations

37
Illuminating plant–microbe interaction: How photoperiod affects rhizosphere and pollutant removal in constructed wetland? DOI Creative Commons

Mengran Guo,

Genji Yang,

Xiangwei Meng

et al.

Environment International, Journal Year: 2023, Volume and Issue: 179, P. 108144 - 108144

Published: Aug. 12, 2023

Rhizosphere is a crucial area in comprehending the interaction between plants and microorganisms constructed wetlands (CWs). However, influence of photoperiod, key factor that regulates photosynthesis rhizosphere microbial activity, remains largely unknown. This study investigated effect photoperiod (9, 12, 15 hours/day) on pollutant removal underlying mechanisms. Results showed 15-hour treatment exhibited highest efficiencies for COD (87.26%), TN (63.32%), NO3--N (97.79%). enhanced photosynthetic pigmentation root which increased transport oxygen soluble organic carbon to rhizosphere, thus promoting nitrification denitrification. Microbial community analysis revealed more stable co-occurrence network due complexity aggregation treatment. Phaselicystis was identified as connector, responsible transferring necessary sources, ATP, electron donors supported optimized nitrogen metabolism CWs. Structural equation model emphasized importance plant-microbe interactions through substance, information, energy exchange. These findings offer valuable insights CWs design operation various latitudes rural areas small-scale decentralized systems.

Language: Английский

Citations

31