Environmental Microbiology,
Journal Year:
2022,
Volume and Issue:
25(2), P. 283 - 293
Published: Nov. 10, 2022
Plant-parasitic
nematodes
cause
devastating
agricultural
damage
worldwide.
Only
a
few
synthetic
nematicides
can
be
used
and
their
application
is
limited
in
fields.
Therefore,
there
need
for
sustainable
environment-friendly
alternatives.
Nematode-trapping
fungi
(NTF)
are
natural
predators
of
nematodes.
They
capture
digest
them
with
hyphae
starting
to
being
as
bio-control
agents.
In
this
study,
we
applied
the
NTF
Arthrobotrys
flagrans
(Duddingtonia
flagrans)
against
wine
pathogenic
nematode
Xiphinema
index.
A.
reduced
number
X.
index
juveniles
pot
cultures
Ficus
carica,
an
alternative
host
plant
index,
significantly.
Sodium-alginate
pellets
spores
were
produced
vineyard
soil
inoculation
under
laboratory
conditions.
The
conoides,
musiformis
superba
enriched
from
several
samples,
showing
presence.
Trap
formation
energy-consuming
process
depends
upon
various
biotic
abiotic
stimuli.
Here,
show
that
bacteria
genus
Delftia,
Bacillus,
Pseudomonas,
Enterobacter
Serratia
induced
trap
like
conoides
oligospora
but
not
absence
along
such
could
combinatorial
way
efficient
biocontrol
nematode-infested
soil.
Applied and Environmental Microbiology,
Journal Year:
2023,
Volume and Issue:
89(9)
Published: Sept. 1, 2023
The
asexual
sporulation
of
filamentous
fungi
is
an
important
mechanism
for
their
reproduction,
survival,
and
pathogenicity.
In
Aspergillus
several
fungi,
BrlA,
AbaA,
WetA
are
the
key
elements
a
central
regulatory
pathway
controlling
conidiation,
MedA
developmental
modifier
that
regulates
temporal
expression
genes;
however,
roles
largely
unknown
in
nematode-trapping
(NT)
fungi.
Arthrobotrys
oligospora
representative
NT
fungus,
which
can
capture
nematodes
by
producing
adhesive
networks
(traps).
Here,
we
characterized
function
AoMedA
three
regulators
(AoBrlA,
AoAbaA,
AoWetA)
A.
gene
disruption,
phenotypic
comparison,
multi-omics
analyses,
as
these
required
conidiation
play
divergent
mycelial
development,
trap
formation,
lipid
droplet
accumulation,
vacuole
assembly,
secondary
metabolism.
A
combined
analysis
traits
transcriptome
showed
AoWetA
involved
regulation
peroxisome,
endocytosis,
autophagy.
Moreover,
yeast
one-hybrid
AoBrlA
regulate
AoMedA,
AoWetA,
whereas
AoAbaA
AoWetA.
Our
results
highlight
AoBrlA,
mycelia
pathogenicity
provide
basis
elucidating
relationship
between
formation
IMPORTANCE
Conidiation
most
common
reproductive
mode
many
plays
essential
role
fungal
pathogens.
Nematode-trapping
special
group
owing
to
innate
abilities
digest
traps
(trapping
devices).
Sporulation
growth
reproduction
conidia
basic
components
biocontrol
reagents
diseases
caused
plant-parasitic
nematodes.
well-known
fungus
routinely
used
model
probing
interaction
this
study,
functions
four
(AoMedA,
were
oligospora.
complex
was
noted;
pleiotropic
multiple
intracellular
activities.
study
first
revealed
oligospora,
contributed
helped
developing
effective
mSphere,
Journal Year:
2023,
Volume and Issue:
8(2)
Published: Feb. 14, 2023
The
peroxins
encoded
by
PEX
genes
involved
in
peroxisome
biogenesis
play
a
crucial
role
cellular
metabolism
and
pathogenicity
fungi.
Herein,
we
characterized
filamentous
fungus-specific
peroxin
Pex14/17
the
Arthrobotrys
oligospora,
representative
species
of
nematode-trapping
deletion
AoPEX14/17
resulted
remarkable
reduction
mycelial
growth,
conidia
yield,
trap
formation,
pathogenicity.
Compared
with
wild-type
strain,
ΔAopex14/17
mutant
exhibited
more
lipid
droplet
reactive
oxygen
accumulation
accompanied
significant
decrease
fatty
acid
utilization
tolerance
to
oxidative
stress.
Transcriptomic
analysis
indicated
that
was
regulation
metabolism,
genetic
information
processing,
environmental
processes.
In
subcellular
morphology,
number
cell
nuclei,
autophagosomes,
Woronin
bodies.
Metabolic
profile
showed
AoPex14/17
affects
biosynthesis
secondary
metabolites.
Yeast
two-hybrid
assay
revealed
interacted
AoPex14
but
not
AoPex13.
Taken
together,
our
results
suggest
is
main
factor
for
modulating
development,
A.
oligospora.
IMPORTANCE
Peroxisome
(PEX)
an
important
pathogenic
However,
roles
remain
largely
unknown
(NT)
Here,
provide
direct
evidence
regulates
conidiation,
autophagy,
endocytosis,
catalase
activity,
stress
response
oxidants,
production.
Transcriptome
metabolic
suggested
multiple
processes
metabolism.
Therefore,
study
extends
functions
genes,
which
helps
elucidate
mechanism
organelle
development
formation
NT
fungi
lays
foundation
efficient
nematode
biocontrol
agents.
Mycology: An International Journal on Fungal Biology,
Journal Year:
2023,
Volume and Issue:
14(2), P. 75 - 90
Published: Jan. 10, 2023
Nematode-trapping
fungi
(NTF)
are
the
majority
of
carnivorous
microbes
to
capture
nematodes
through
diverse
and
sophisticated
trapping
organs
derived
from
hyphae.
They
can
adopt
lifestyles
in
addition
saprophytism
obtain
extra-nutrition
nematodes.
As
a
special
group
fungi,
NTF
not
only
excellent
model
organism
for
studying
lifestyle
transition
but
also
natural
resources
exploring
biological
control
However,
mechanism
remains
poorly
understood.
Nowadays,
omics
studies
have
provided
numerous
genes
pathways
that
associated
with
phenotypes
traits,
which
need
molecular
tools
verify.
Here,
we
review
development
progress
gene
manipulation
NTF,
including
methodology
strategy
transformation,
random
mutagenesis
methods
target
methods.
The
principle
practical
approach
each
method
was
summarized
discussed,
basic
operational
flow
tool
described.
This
paper
offers
clear
reference
instruction
researchers
who
work
on
as
well
other
fungi.
Molecular Microbiology,
Journal Year:
2023,
Volume and Issue:
121(1), P. 18 - 25
Published: Nov. 13, 2023
Abstract
Where
does
one
draw
the
line
between
primary
and
secondary
metabolism?
The
answer
depends
on
perspective.
Microbial
metabolites
(SMs)
were
at
first
believed
not
to
be
very
important
for
producers
because
they
are
dispensable
growth
under
laboratory
conditions.
However,
such
compounds
become
in
natural
niches
of
organisms,
some
prime
importance
humanity.
Polyketides
an
group
SMs
with
aflatoxin
as
a
well‐known
well‐characterized
example.
In
Aspergillus
spp.,
all
34
afl
genes
encoding
enzymes
biosynthesis
located
close
vicinity
chromosome
III
so‐called
gene
cluster.
This
led
assumption
that
most
required
polyketide
organized
clusters.
Recent
research,
however,
revealed
enormous
complexity
different
polyketides,
ranging
from
individual
synthases
cluster
producing
several
compounds,
or
clusters
additional
scattered
genome
production
compound.
Research
last
decade
furthermore
huge
potential
SM
hidden
fungal
genomes,
methods
developed
wake
up
sleeping
genes.
analysis
organismic
interactions
starts
reveal
ecological
functions
polyketides
fungi.
Frontiers in Cellular and Infection Microbiology,
Journal Year:
2022,
Volume and Issue:
11
Published: Jan. 25, 2022
Autophagy
is
a
conserved
cellular
recycling
and
trafficking
pathway
in
eukaryotes
that
plays
an
important
role
cell
growth,
development,
pathogenicity.
Atg1
Atg13
form
the
Atg1–Atg13
complex,
which
essential
for
autophagy
yeast.
Here,
we
characterized
roles
of
Aolatg1
Aolatg13
genes
encoding
these
autophagy-related
proteins
nematode-trapping
fungus
Arthrobotrys
oligospora
.
Investigation
process
by
using
AoAtg8-GFP
fusion
protein
showed
autophagosomes
accumulated
inside
vacuoles
wild-type
(WT)
A.
strain,
whereas
two
mutant
strains
with
deletions
or
,
GFP
signals
were
observed
outside
vacuoles.
Similar
results
transmission
electron
microscopy.
Furthermore,
deletion
caused
severe
defects
mycelial
conidiation,
conidial
germination,
trap
formation,
nematode
predation.
In
addition,
transcripts
several
sporulation-related
significantly
downregulated
Δ
mutant.
contrast,
except
altered
resistance
to
chemical
stressors,
no
obvious
differences
phenotypic
traits
between
WT
strains.
The
gene
ontology
analysis
transcription
profiles
set
differentially
expressed
was
highly
enriched
relevant
membrane
components.
Kyoto
Encyclopedia
Genes
Genomes
indicated
those
related
metabolic
pathways,
processes,
including
ubiquitin-mediated
proteolysis
SNARE
interaction
vesicular
transport,
during
formation.
These
indicate
play
crucial
also
involved
regulation
asexual
Our
highlight
importance
growth
development
provide
basis
elucidating
formation
pathogenicity
fungi.
Microbiology Spectrum,
Journal Year:
2023,
Volume and Issue:
11(5)
Published: Sept. 27, 2023
Dactylellina
haptotyla
is
a
typical
nematode-trapping
fungus
that
has
garnered
the
attention
of
many
scholars
for
its
highly
effective
lethal
potential
nematodes.
Secondary
metabolites
play
an
important
role
in
D.
haptotyla-nematode
interactions,
but
which
perform
function
remains
unclear.
We
report
metabolic
functions
based
on
high-quality,
chromosome-level
genome
assembly
wild
YMF1.03409.
The
results
indicate
large
variety
secondary
and
their
biosynthetic
genes
were
significantly
upregulated
during
stage.
In
parallel,
we
identified
2-furoic
acid
was
specifically
produced
nematode
trapping
by
YMF1.03409
isolated
it
from
fermentation
production.
2-Furoic
demonstrated
strong
nematicidal
activity
with
LD50
value
55.05
µg/mL
against
Meloidogyne
incognita
at
48
h.
Furthermore,
pot
experiment
showed
number
galls
tomato
root
reduced
experimental
group
treated
acid.
considerable
increase
content
infection
process
virulent
revealed
essential
synergistic
effect
fungal
infection.
IMPORTANCE
have
significant
application
biocontrol.
this
study,
determined
sequence
long-read
sequencing
technology.
Comparative
genomic
analysis
series
pathogenesis-related
gene
family
contraction
events
evolution
Combining
transcriptomic
metabolomic
data
as
well
vitro
test
results,
compound
biocontrol,
acid,
identified.
Our
result
expanded
genetic
resource
previously
unreported
small
molecule,
provides
new
options
development
plant
biocontrol
agents.
Journal of Cell Science,
Journal Year:
2025,
Volume and Issue:
138(8)
Published: April 15, 2025
ABSTRACT
Filamentous
fungi
grow
by
apical
extension
where
secretory
vesicles
are
transported
long
distances
microtubules
and
actin
prior
to
fusion
with
the
cell
membrane.
Apical,
membrane-bound
cell-end
marker
proteins
(CEMPs)
organise
cytoskeletons
thereby
growth
machinery.
CEMPs
have
been
characterised
mainly
in
Schizosaccharomyces
pombe
Aspergillus
nidulans.
Here,
we
studied
role
of
nematode-trapping
fungus
Arthrobotrys
flagrans.
This
predatory
forms
ring-shaped
adhesive
traps
capture
nematodes,
such
as
Caenorhabditis
elegans.
Traps
morphologically
physiologically
different
from
vegetative
hyphae
generated
hyphal
turning
trap
tip
basal
hypha.
The
absence
membrane-anchored
CEMP
receptor
protein,
TeaR,
caused
a
reduction
ring
size,
whereas
deletion
teaA
or
teaC
largely
prevented
formation
hyphae,
most
appeared
sticks.
Hence,
compared
nidulans,
loss
function
results
severe
morphological
phenotype.
mutant
strains
also
show
changes
cell-to-cell
communication
fusion,
suggesting
novel
functions
interconnections
other
signalling
processes
cell.
Microorganisms,
Journal Year:
2024,
Volume and Issue:
12(3), P. 615 - 615
Published: March 19, 2024
Arthrobotrys
oligospora,
a
widespread
nematode-trapping
fungus
which
can
produce
conidia
for
asexual
reproduction
and
form
trapping
devices
(traps)
to
catch
nematodes.
However,
little
is
known
about
the
sporulation
mechanism
of
A.
oligospora.
This
research
characterized
functions
regulatory
roles
upstream
spore-producing
genes,
AosfgA
AofluG,
in
Our
analysis
showed
that
AofluG
interacted
with
each
other.
Meanwhile,
gene
was
downregulated
ΔAosfgA
mutant
strain,
indicating
positively
regulates
AofluG.
Loss
genes
led
shorter
hyphae
more
septa,
strain
responded
heat
chemical
stresses.
Surprisingly,
number
nuclei
increased
mycelia
but
reduced
ΔAofluG
mutants.
In
addition,
after
nematode
induction,
volume
vacuoles
were
remarkably
strains.
The
abundance
metabolites
markedly
decreased
Collectively,
play
critical
mycelial
development,
they
are
also
involved
vacuole
assembly,
stress
response,
secondary
metabolism.
study
provides
distinct
insights
into
fungi.