Metagenomics approaches in unveiling the dynamics of Plant Growth-Promoting Microorganisms (PGPM) vis-à-vis Phytophthora sp. suppression in various crop ecological systems DOI

N SIVAPRAKASAM,

V. Sendhilvel, G. Karthikeyan

et al.

Research in Microbiology, Journal Year: 2024, Volume and Issue: 175(7), P. 104217 - 104217

Published: June 9, 2024

Language: Английский

Decoupling Responses of Phyllosphere and Rhizosphere Bacterial Communities to Spatiotemporal Environmental Changes DOI
Wei Chen, Biao Zhu, Chen Yang

et al.

Global Change Biology, Journal Year: 2025, Volume and Issue: 31(4)

Published: April 1, 2025

ABSTRACT Understanding and predicting how plant‐associated microbes respond to environmental changes is of key importance understanding future plant performance. Yet, aboveground belowground microbial communities, which may interactively affect performance, simultaneously changes, remains unknown. To fill this gap, we monitored temporal phyllosphere rhizosphere bacterial communities three perennial species at 18 sites spanning a 1500 m elevational gradient. We showed distinct trajectories these community types, likely reflecting their differential responses abiotic (e.g., air moisture) biotic specific leaf area) factors. Further, using transplantation experiment with the same soils, show that portion taxa from transplanted persisted in plants' 2 months after being warmer sites. In contrast, were primarily harbored by colonizing local communities. Notably, relative growth rate plants new versus original was positively correlated compositional dissimilarity between Together, our results highlight role compartment‐by‐environment interactions shaping holobiome emphasize need understand impacts such on performance under global change.

Language: Английский

Citations

0

Leaf Development and Its Interaction with Phyllospheric Microorganisms: Impacts on Plant Stress Responses DOI Creative Commons
Huanhuan Yang, Jing Liu‐Zeng, Mei Ma

et al.

Plant Stress, Journal Year: 2025, Volume and Issue: unknown, P. 100843 - 100843

Published: April 1, 2025

Language: Английский

Citations

0

Metagenomics and plant-microbe symbioses: Microbial community dynamics, functional roles in carbon sequestration, nitrogen transformation, sulfur and phosphorus mobilization for sustainable soil health DOI
Atif Khurshid Wani,

Fayzan Qadir,

Noureddine Elboughdiri

et al.

Biotechnology Advances, Journal Year: 2025, Volume and Issue: 82, P. 108580 - 108580

Published: April 15, 2025

Language: Английский

Citations

0

Natural Cross-Kingdom Spread of Apple Scar Skin Viroid from Apple Trees to Fungi DOI Creative Commons
Mengyuan Tian,

Shuang Wei,

Ruiling Bian

et al.

Cells, Journal Year: 2022, Volume and Issue: 11(22), P. 3686 - 3686

Published: Nov. 20, 2022

Viroids are the smallest known infectious agents that thought to only infect plants. Here, we reveal several species of plant pathogenic fungi were isolated from apple trees infected with scar skin viroid (ASSVd) carried ASSVd naturally. This finding indicates spread viroids under natural conditions and further suggests possible existence mycoviroids in nature. A total 117 fungal isolates ASSVd-infected trees, majority (85.5%) being an ascomycete Alternaria alternata remaining other plant-pathogenic or -endophytic fungi. Out examined samples, detected 81 (69.2%) including A. as well species. The phenotypic comparison ASSVd-free specimens developed by single-spore isolation isogenic lines showed affected growth pathogenicity certain confers hypovirulence on Epicoccum nigrum. mycobiome analysis tree-associated infection did not generally affect diversity structure communities but specifically increased abundance Taken together, these data occurrence plants; additionally, integral component ecosystem, may Moreover, this study provides evidence could induce symptoms filamentous

Language: Английский

Citations

14

Effects of Chemical Fertilization and Microbial Inoculum on Bacillus subtilis Colonization in Soybean and Maize Plants DOI Creative Commons

Clara Barros Bueno,

Roberta Mendes dos Santos,

Fernando de Souza Buzo

et al.

Frontiers in Microbiology, Journal Year: 2022, Volume and Issue: 13

Published: July 6, 2022

Plant growth-promoting endophytic microorganisms in agriculture have been expanding Brazil and are an excellent strategy to face the challenges of current agriculture, such as reducing production costs with fewer environmental impacts, without detriment productivity. However, little is known about factors that can affect colonization inoculant concentration mineral fertilization. The present study aimed evaluate influence these on soybean maize crops found for crops, highest Bacillus subtilis 1 × 104 1010 CFU ml-1 promoted number recovered bacteria, when there was no fertilization limited suggesting interferes colonization. For bacteria occurred from 106 ml-1, not differing concentrations. A dose 25% greatest B. recovery compared other treatments. Regarding plant development, microbial inoculum concentrations did necessarily promote greater positive growth promotion effects both crops. results also suggest higher does same proportion. plants, a strong tendency increase concentration, need doses achieve development consequently increased, inoculations 105 between 44% 62% ideal combinations development. In best response (height) obtained using inoculation 102 increasing according doses. findings suggest, crop, high required more photosynthetic metabolites plants nutrients soil. Thus, must be increased.

Language: Английский

Citations

13

Soybean and Cotton Spermosphere Soil Microbiome Shows Dominance of Soilborne Copiotrophs DOI Creative Commons
Oluwakemisola Olofintila, Zachary A. Noel

Microbiology Spectrum, Journal Year: 2023, Volume and Issue: 11(4)

Published: June 1, 2023

The spermosphere is the transient, immediate zone of soil around imbibing and germinating seeds. It represents a habitat where there contact between seed-associated microbes microbes, but it studied less than other plant habitats. Previous studies on microbiology were primarily culture based or did not sample as initially defined in space time. Thus, objectives this study to develop an efficient strategy collect soils soybean cotton nonsterile investigate changes microbial communities. method employed sufficiently collected by constraining sampled with cork borer confining 12-well microtiter plate. Spermosphere prokaryote composition changed over time depended crop within 6 h after seeds sown. By 12 18 h, crops had unique communities soils. Prokaryote evenness dropped following seed imbibition, proliferation copiotrophic bacteria. Due their long history growth promotion, operational taxonomic units (OTUs) Bacillus, Paenibacillus, Burkholderia, Massilia, Azospirillum, Pseudomonas notable organisms enriched. Fungi prokaryotes hub taxa networks. Additionally, enriched hubs networks, suggesting that besides those may be important for Overall, advances knowledge assembly microbiome early plant's life, which have health implications more mature stages. IMPORTANCE central hypothesis research was species exudate release would alter soil. Our investigated response initial burst nutrients into soil, filling gaps from previous pregerminated under sterile conditions. We identified several bacterial lineages promotion proliferating release. With comparative network approach, we show these bacteria are demonstrating (including fungi) community structure. This improves dynamics understudied helps inform solutions biologically ecologically motivated pathogens.

Language: Английский

Citations

7

Microbial community function increases host plant leaf growth in a pitcher plant experimental system DOI Creative Commons
Jessica R. Bernardin, Erica B. Young, Sarah M. Gray

et al.

bioRxiv (Cold Spring Harbor Laboratory), Journal Year: 2024, Volume and Issue: unknown

Published: Jan. 31, 2024

Across diverse ecosystems, bacteria and their host organisms engage in complex relationships having negative, neutral, or positive interactions. However, the specific effects of leaf-associated bacterial community functions on plant growth are poorly understood. To address this gap, we explored between function purple pitcher (Sarracenia purpurea). The main aim our research was to investigate how different affect nutrient content plant. Previous had suggested that microbial communities may aid prey decomposition subsequent acquisition carnivorous plants, including S. purpurea. functional roles these uptake not well known. In study, sterile, freshly opened leaves (pitchers) were inoculated with three functionally distinct, pre-assembled examined over 8 weeks. Bacterial composition measured using physiological assays, metagenomics, metatranscriptomics. Distinct affected traits; a enriched secondary metabolite production traits associated larger almost double biomass control pitchers. Physiological differences supported by metatranscriptomic analysis; for example, highest chitinase activity greater expression transcripts enzymes. relationship observed here indicates potential mechanisms host-associated support health growth.

Language: Английский

Citations

2

Microbiome selection and evolution within wild and domesticated plants DOI Creative Commons
Christopher J. Barnes,

Mohammad Bahram,

Mogens Nicolaisen

et al.

Trends in Microbiology, Journal Year: 2024, Volume and Issue: unknown

Published: Dec. 1, 2024

Language: Английский

Citations

2

Inoculum Concentration and Mineral Fertilization: Effects on the Endophytic Microbiome of Soybean DOI Creative Commons

Roberta Mendes dos Santos,

Luis Gabriel Cueva-Yesquén, Fabiana Fantinatti‐Garboggini

et al.

Frontiers in Microbiology, Journal Year: 2022, Volume and Issue: 13

Published: July 7, 2022

Soybean crops are of great economic importance worldwide and in Brazil. This crop is a commodity that provides large amounts financial resources to the country. productivity influenced by several biotic abiotic factors, most these factors cannot be controlled agricultural practices. Due soybean cultivars used their required yields, crop, similar other agriculturally important crops, requires mineral fertilizers. There microorganisms colonize plant roots without causing symptoms or damage. These tissues called endophytes can often promote growth development. Little known about influence endophyticism. The aim present study was evaluate whether Bacillus subtilis inoculant concentrations levels fertilization recommended for have any on endophytic microbiome roots. results show B. inoculations did not affect community roots; however, evaluation microbial structure according alpha diversity metrics observed richness, Chao1 index, Shannon index Simpson showed higher at 50 100%, with significant difference (p < 0.05) between 0 50% 100% fertilization.

Language: Английский

Citations

11

Lactic Bacteria with Plant-Growth-Promoting Properties in Potato DOI Creative Commons

Lilian Dutra Panetto,

Joyce Dória Rodrigues Soares, Carlos Henrique Barbosa Santos

et al.

Microbiology Research, Journal Year: 2023, Volume and Issue: 14(1), P. 279 - 288

Published: Feb. 17, 2023

This study aimed to evaluate the abilities of three bacteria, Bacillus cereus, Succinovibrio dextrinosolvens, and Lactobacillus acidophilus, fix nitrogen, solubilize phosphorus, produce cellulosic amylolytic enzymes. Then, these bacteria were evaluated in potato plants under field conditions. The bacterium B. cereus showed ability synthesize amylase, indole acetic acid (IAA) production 9.08 μg mL−1, phosphorus solubilization 14.93 mg P L−1, nitrogen fixation 0.7 L−1. S. dextrinosolvens siderophores IAA 10.25 41.38 0.42 N L. acidophilus siderophores, 7.25 5.58 0.5 Some plant parameters increased as shoot dry matter by mixture root from root. More studies are needed deepen understanding potential bacteria; however, great be used a growth promoter crops future.

Language: Английский

Citations

6