Frontiers in Microbiology,
Journal Year:
2023,
Volume and Issue:
14
Published: Feb. 1, 2023
Soil
fungal
community
has
been
largely
explored
by
comparing
their
natural
diversity.
However,
there
is
a
relatively
small
body
of
literature
concerned
with
assembly
processes
and
co-occurrence
network
correlations
carried
out
across
large
spatial-temporal
scales
complex
environmental
gradients
in
ecosystems
different
habitats
China.
Thus,
soil
were
assessed
to
predict
changes
function
98
forest
grassland
sites
from
the
Sichuan,
Hubei,
Hebei
Provinces
China
using
high-throughput
sequencing
nuclear
ribosomal
internal
transcribed
spacer
2
(ITS-2).
The
10
most
abundant
phyla
results
showed
that
Ascomycota
was
phylum
forests
Sichuan
province
(64.42%)
(53.46%).
Moreover,
core
taxa
(487
OTUs)
represented
0.35%
total
OTUs.
We
observed
higher
Shannon
diversity
richness
(the
Chao1
index)
diverse
mixed
Hubei
than
mono-cultured
Province.
Although
alpha
beta
diversities
exhibited
biogeographical
patterns,
pattern
mostly
driven
dispersal
limitation
selection
habitats.
Fungal
analyses
more
intense
at
Saihanba
National
Forest
Park
(SNFP,
Hebei).
In
contrast,
boundaries
between
grasslands
SNFP.
Additionally,
highest
number
positive
(co-presence
or
co-operative)
genera
inferred
habitat,
which
led
communities
form
commensalism
relationships
compared
areas
having
negative
(mutual
exclusion
competitive).
generalized
additive
model
(GAM)
analysis
association
indices
geographical
coordinates
did
not
follow
general
pattern;
instead,
fluctuation
these
restricted
local
each
sampling
location.
These
indicated
existence
site
effect
on
our
sites.
Our
observation
suggested
particular
habitat
are
necessarily
associated
networks.
Global Change Biology,
Journal Year:
2021,
Volume and Issue:
27(11), P. 2273 - 2278
Published: March 4, 2021
Abstract
Human
activity
is
affecting
every
ecosystem
on
Earth,
with
terrestrial
biodiversity
decreasing
rapidly.
influences
materialize
in
the
form
of
numerous,
jointly
acting
factors,
yet
experimental
study
such
joint
impacts
not
well
developed.
We
identify
absence
a
systematic
ordering
system
factors
according
to
their
properties
(traits)
as
an
impediment
progress
and
offer
priori
trait‐based
factor
classification
illustrate
this
point,
starting
at
coarsest
level
physical,
biological
or
chemical
nature
factors.
Such
classifications
can
serve
communication
science,
but
also
be
used
heuristic
tools
develop
questions
formulate
new
hypotheses,
predictors
effects,
which
we
explore
here.
hope
that
one
proposed
here
help
shift
spotlight
multitude
anthropogenic
changes
ecosystems,
unravel
great
number
iScience,
Journal Year:
2022,
Volume and Issue:
25(7), P. 104559 - 104559
Published: June 9, 2022
Anthropogenic
climate
change
is
increasing
the
incidence
of
extremes.
Consequences
extremes
on
biodiversity
can
be
highly
detrimental,
yet
few
studies
also
suggest
beneficial
effects
certain
organisms.
To
obtain
a
general
understanding
ecological
responses
to
extremes,
we
present
review
how
16
major
taxonomic/functional
groups
(including
microorganisms,
plants,
invertebrates,
and
vertebrates)
respond
during
extreme
drought,
precipitation,
temperature.
Most
negatively
events,
whereas
such
as
mosses,
legumes,
trees,
vertebrate
predators
most
We
further
highlight
that
recovery
after
challenging
predict
purely
based
or
immediately
By
accounting
for
characteristics
recovering
species,
resource
availability,
species
interactions
with
neighboring
competitors
facilitators,
mutualists,
enemies,
outline
conceptual
framework
better
in
terrestrial
ecosystems.
Global Change Biology,
Journal Year:
2023,
Volume and Issue:
29(19), P. 5706 - 5719
Published: July 14, 2023
Soil
eukaryotes
play
a
crucial
role
in
maintaining
ecosystem
functions
and
services,
yet
the
factors
driving
their
diversity
distribution
remain
poorly
understood.
While
many
studies
focus
on
some
eukaryotic
groups
(mostly
fungi),
they
are
limited
spatial
scale.
Here,
we
analyzed
an
unprecedented
amount
of
observational
data
soil
eukaryomes
at
continental
scale
(787
sites
across
Europe)
to
gain
further
insights
into
impact
wide
range
environmental
conditions
(climatic
edaphic)
community
composition
structure.
We
found
that
fungi,
protists,
rotifers,
tardigrades,
nematodes,
arthropods,
annelids
was
predominantly
shaped
by
type
(annual
permanent
croplands,
managed
unmanaged
grasslands,
coniferous
broadleaved
woodlands),
higher
observed
croplands
than
less
intensively
systems,
such
as
woodlands.
Also
more
specialized
eukaryotes,
while
between
homogeneous
compared
other
ecosystems.
The
high
proportion
overlapping
taxa
ecosystems
also
indicates
DNA
has
accumulated
from
previous
land
uses,
hence
mimicking
transformations
occurring
Europe
last
decades.
This
strong
ecosystem-type
influence
linked
properties,
particularly,
pH
richness
annelids,
plant-available
phosphorus
drove
nematodes.
Furthermore,
organic
carbon
total
nitrogen
ratio
crucially
explained
possibly
decades
agricultural
inputs.
Our
results
highlighted
importance
long-term
variables
rather
measured
time
sampling
shaping
communities,
which
reinforces
need
include
those
addition
future
monitoring
programs
conservation
efforts.
New Phytologist,
Journal Year:
2020,
Volume and Issue:
229(5), P. 2945 - 2956
Published: Nov. 5, 2020
Global
environmental
change
poses
threats
to
plant
and
soil
biodiversity.
Yet,
whether
biodiversity
loss
can
further
influence
community's
response
global
is
still
poorly
understood.
We
created
a
gradient
of
using
the
dilution-to-extinction
approach,
investigated
effects
on
communities
during
following
manipulations
simulating
disturbances
in
experimental
grassland
microcosms.
Grass
herb
biomass
was
decreased
by
drought
promoted
nitrogen
deposition,
fast
recovery
observed
disturbances,
independently
loss.
Warming
disturbance
only
when
not
reduced.
However,
legumes
suppressed
these
there
were
more
detrimental
with
reduced
Moreover,
disturbances.
Similar
patterns
found
for
diversity.
The
changes
might
be
partly
attributed
mycorrhizal
mutualists.
Our
study
shows
that
crucial
legume
persistence
diversity
maintenance
faced
change,
highlighting
importance
as
potential
buffering
mechanism
community
composition
grasslands.
Plant Molecular Biology,
Journal Year:
2021,
Volume and Issue:
109(4-5), P. 447 - 467
Published: Dec. 2, 2021
Endophytes
are
crucial
for
the
promotion
of
rice
growth
and
stress
tolerance
can
be
used
to
increase
crop
yield.
thus
exploited
in
biotechnology
genetic
engineering
as
eco-friendly
cost-effective
means
development
high-yielding
stress-tolerant
plants.
Rice
(Oryza
sativa)
is
continuously
subjected
biotic
abiotic
stresses,
compromising
consequently
The
situation
exacerbated
by
climate
change
impacting
on
ecosystems
biodiversity.
Genetic
has
been
develop
rice,
alongside
physical
chemical
methods
mitigate
effect
these
stresses.
However,
success
strategies
hindered
short-lived
field
public
concern
adverse
effects
associated.
limited
cultivars
developed
through
breeding
or
transgenic
approaches
due
complex
nature
well
resistance
breakdown
caused
accelerated
evolution
pathogens.
It
therefore
necessary
novel
acceptable
enhance
durable
improve
In
last
decade,
plant
promoting
(PGP)
microbes,
especially
endophytes,
have
drawn
attention
agricultural
scientists
worldwide,
their
ability
environmental
stresses
crops,
without
causing
effects.
Increasing
evidence
indicates
that
endophytes
effectively
confer
fitness
benefits
also
under
conditions.
Endophyte-produced
metabolites
control
expression
stress-responsive
genes
physiological
performance
This
review
highlights
current
available
PGP
microbe-promoted
such
salinity
drought
ones,
with
special
emphasis
endophytes.
Associated
molecular
mechanisms
illustrated,
prospects
sustainable
production
light
impending
change,
discussed.
Global Change Biology,
Journal Year:
2024,
Volume and Issue:
30(3)
Published: March 1, 2024
Abstract
Soil
microbial
diversity
mediates
a
wide
range
of
key
processes
and
ecosystem
services
influencing
planetary
health.
Our
knowledge
biogeography
patterns,
spatial
drivers
human
impacts
at
the
continental
scale
remains
limited.
Here,
we
reveal
bacterial
fungal
community
distribution
in
Australian
topsoils
using
1384
soil
samples
from
diverse
bioregions.
findings
highlight
that
climate
factors,
particularly
precipitation
temperature,
along
with
properties,
are
primary
topsoil
biogeography.
Using
random
forest
machine‐learning
models,
generated
high‐resolution
maps
bacteria
fungi
across
Australia.
The
revealed
hotspots,
for
example,
eastern
coast,
southeastern
west
coast
were
dominated
by
Proteobacteria
Acidobacteria.
Fungal
is
strongly
influenced
precipitation,
Ascomycota
dominating
central
region.
This
study
also
demonstrated
impact
modification
on
underground
scale,
which
significantly
increased
relative
abundance
Ascomycota,
but
decreased
Chloroflexi
Basidiomycota.
variations
phyla
could
be
attributed
to
distinct
responses
altered
environmental
factors
after
modifications.
provides
insights
into
microbiota,
valuable
regional
biodiversity
assessments
monitoring
global
changes.
Global Ecology and Biogeography,
Journal Year:
2020,
Volume and Issue:
29(10), P. 1674 - 1690
Published: Aug. 2, 2020
Abstract
Motivation
and
aim
Soil
biodiversity
is
central
to
ecosystem
function
services.
It
represents
most
of
terrestrial
at
least
a
quarter
all
on
Earth.
Yet,
research
into
broad,
generalizable
spatial
temporal
patterns
soil
biota
has
been
limited
compared
aboveground
systems
due
complexities
the
system.
We
review
literature
identify
key
considerations
necessary
expand
macroecology
beyond
recent
surge
global
maps
taxa,
so
that
we
can
gain
greater
insight
mechanisms
processes
shaping
biodiversity.
focus
primarily
three
groups
taxa
(earthworms,
mycorrhizal
fungi
bacteria)
represent
range
body
sizes
ecologies,
and,
therefore,
interact
with
their
environment
different
scales.
Results
The
soil,
including
fine‐scale
heterogeneity,
3‐D
habitat
structure,
difficulties
taxonomic
delimitation,
wide‐ranging
ecologies
its
inhabitants,
require
classical
macroecological
toolbox
be
expanded
consider
novel
sampling,
molecular
identification,
functional
approaches,
environmental
variables,
modelling
techniques.
Main
conclusions
provides
complex
system
within
which
apply
research,
yet,
it
this
property
itself
makes
field
ripe
for
innovative
methodologies
approaches.
To
achieve
this,
soil‐specific
data,
spatio‐temporal,
biotic,
abiotic
are
stages
from
sampling
design
statistical
analyses.
Insights
whole
ecosystems
new
approaches
link
genes,
functions
diversity
across
scales,
alongside
already
applied
in
macroecology,
invasion
ecology
aquatic
ecology,
will
facilitate
investigation
biota,
understanding
between
functioning
ecosystems.
Journal of Sustainable Agriculture and Environment,
Journal Year:
2022,
Volume and Issue:
1(4), P. 245 - 261
Published: Nov. 11, 2022
Abstract
Global
change
is
affecting
soil
biodiversity
and
functioning
across
all
terrestrial
ecosystems.
Still,
much
unknown
about
how
function
will
in
the
future
response
to
simultaneous
alterations
climate
land
use,
as
well
other
environmental
drivers.
It
crucial
understand
direct,
indirect
interactive
effects
of
global
drivers
on
communities
ecosystems
contexts,
not
only
today
but
also
near
future.
This
particularly
relevant
for
international
efforts
tackle
like
Paris
Agreement,
considering
failure
achieve
2020
targets,
especially
target
halting
degradation.
Here,
we
outline
main
frontiers
related
ecology
that
were
presented
discussed
at
thematic
sessions
World
Biodiversity
Forum
2022
Davos,
Switzerland.
We
highlight
multiple
knowledge
associated
with
data
integration,
causal
inference,
scenarios,
critical
facets,
underrepresented
drivers,
collaboration,
application
transdisciplinarity,
policy
public
communication.
These
identified
research
priorities
are
immediate
interest
scientific
community
may
be
considered
priority
programmes
calls
funding.