BMC Microbiology,
Journal Year:
2021,
Volume and Issue:
21(1)
Published: April 9, 2021
Experimental
evolution
has
a
long
history
of
uncovering
fundamental
insights
into
evolutionary
processes,
but
largely
neglected
one
underappreciated
component--the
microbiome.
As
eukaryotic
hosts
evolve,
the
microbiome
may
also
respond
to
selection.
However,
microbial
contribution
host
remains
poorly
understood.
Here,
we
re-analyzed
genomic
data
characterize
metagenomes
from
ten
Evolve
and
Resequence
(E&R)
experiments
in
Drosophila
melanogaster
determine
how
changed
response
selection.Bacterial
diversity
was
significantly
different
5/10
studies,
primarily
traits
associated
with
metabolism
or
immunity.
Duration
selection
did
not
influence
bacterial
diversity,
highlighting
importance
associations
specific
traits.Our
re-analysis
suggests
often
responds
selection;
thus,
contribute
E&R
experiments.
We
outline
important
considerations
for
incorporating
The
approach
provide
critical
host-microbiome
interactions
insight
basis
adaptation.
PeerJ,
Journal Year:
2019,
Volume and Issue:
7, P. e8097 - e8097
Published: Nov. 19, 2019
Microorganisms
play
a
central
role
in
the
biology
of
vinegar
flies
such
as
Drosophila
suzukii
and
melanogaster:
serving
food
source
to
both
adults
larvae,
influencing
range
traits
including
nutrition,
behavior,
development.
The
niches
utilized
by
fly
species
partially
overlap,
do
microbiota
that
sustain
them,
interactions
among
these
players
may
drive
development
crop
diseases.
To
learn
more
about
how
one
affect
other,
we
isolated
identified
microbes
from
field-caught
D.
suzukii,
then
characterized
their
effects
on
melanogaster
larval
time
laboratory.
We
found
consistently
included
yeasts
bacteria.
It
was
dominated
genus
Hanseniaspora,
bacteria
families
Acetobacteraceae
Enterobacteriaceae.
Raising
under
gnotobiotic
conditions
with
each
microbial
isolate
individually,
some
promoted
relative
axenic
conditions,
but
most
did
not
have
significant
effect.
In
contrast,
nearly
all
tested
significantly
accelerated
exception
Starmerella
bacillaris,
which
had
opposite
effect:
slowing
developmental
rate.
investigated
basis
for
this
effect
examining
whether
S.
bacillaris
cells
could
growth,
measuring
survival
other
gut.
Our
results
suggest
is
digested
therefore
cannot
serve
nutrition.
These
findings
interesting
implications
possible
between
two
Drosophilia
nature.
Overall,
promote
development,
consistent
model
infestation
fruit
can
open
up
habitat
melanogaster.
propose
microbiome
an
important
dimension
ecological
species.
Journal of Experimental Biology,
Journal Year:
2020,
Volume and Issue:
unknown
Published: Jan. 1, 2020
The
gut
microbiome
has
been
proposed
to
influence
diverse
behavioral
traits
of
animals,
although
the
experimental
evidence
is
limited
and
often
contradictory.
Here,
we
made
use
tractability
Drosophila
melanogaster
for
both
analyses
studies
test
how
elimination
microorganisms
affects
a
number
traits.
Relative
conventional
flies
(i.e.
with
unaltered
microbiome),
microbiologically
sterile
(axenic)
displayed
moderate
reduction
in
memory
performance
olfactory
appetitive
conditioning
courtship
assays.
microbiological
status
had
small
or
no
effect
on
anxiety-like
behavior
(centrophobism)
circadian
rhythmicity
locomotor
activity,
but
axenic
tended
sleep
longer
reduced
rebound
after
deprivation.
These
last
two
effects
were
robust
most
tests
conducted
wild-type
Canton
S
w1118
strains,
as
well
using
an
isogenized
panel
mutations
period
gene,
which
causes
altered
rhythmicity.
Interestingly,
absence
microbiota
few
features,
notably
instantaneous
activity
speed,
varied
among
strains.
Taken
together,
our
findings
demonstrate
that
can
have
subtle
significant
specific
aspects
behavior,
some
are
dependent
genetic
background.
The
timing
of
life
history
events
has
important
fitness
consequences.
Since
the
1950s,
researchers
have
combined
first
principles
and
data
to
predict
optimal
transitions.
Recently,
a
striking
mystery
emerged.
Such
transitions
can
be
shaped
by
completely
different
branch
tree
life:
species
in
microbiome.
Probing
these
interactions
using
testable
predictions
from
evolutionary
theory
could
illuminate
whether
how
host-microbiome
integrated
histories
evolve
maintained.
Beyond
advancing
fundamental
science,
this
research
program
yield
applications.
In
an
age
microbiome
engineering,
understanding
contexts
that
lead
microbiota
signaling
shaping
ontogeny
offer
novel
mechanisms
for
manipulations
increase
agriculture
manipulating
plant
responses
stressful
environments,
or
reduce
pathogen
transmission
affecting
vector
efficiency.
We
combine
evidence
essential
questions
underlying
existence
microbiome-dependent
ontogenetic
(MiDOT)
fuel
on
emerging
topic.
Environmental Microbiology Reports,
Journal Year:
2020,
Volume and Issue:
12(2), P. 220 - 228
Published: Jan. 31, 2020
Summary
The
relative
importance
of
host
control,
environmental
effects
and
stochasticity
in
the
assemblage
host‐associated
microbiomes
is
being
debated.
We
analysed
microbiome
among
fly
populations
that
were
sampled
across
Europe
by
European
Drosophila
Population
Genomics
Consortium
(DrosEU).
In
order
to
better
understand
structuring
principles
natural
D
.
melanogaster
microbiome,
we
combined
data
on
climate
food‐substrate
with
dense
genomic
profiling.
Food‐substrate,
temperature,
population
structure
correlated
structure.
Microbes,
whose
abundance
was
co‐structured
populations,
also
differed
between
flies
their
substrate
an
independent
survey.
This
finding
suggests
common,
host‐related
different
spatial
scales.
BMC Microbiology,
Journal Year:
2021,
Volume and Issue:
21(1)
Published: April 9, 2021
Experimental
evolution
has
a
long
history
of
uncovering
fundamental
insights
into
evolutionary
processes,
but
largely
neglected
one
underappreciated
component--the
microbiome.
As
eukaryotic
hosts
evolve,
the
microbiome
may
also
respond
to
selection.
However,
microbial
contribution
host
remains
poorly
understood.
Here,
we
re-analyzed
genomic
data
characterize
metagenomes
from
ten
Evolve
and
Resequence
(E&R)
experiments
in
Drosophila
melanogaster
determine
how
changed
response
selection.Bacterial
diversity
was
significantly
different
5/10
studies,
primarily
traits
associated
with
metabolism
or
immunity.
Duration
selection
did
not
influence
bacterial
diversity,
highlighting
importance
associations
specific
traits.Our
re-analysis
suggests
often
responds
selection;
thus,
contribute
E&R
experiments.
We
outline
important
considerations
for
incorporating
The
approach
provide
critical
host-microbiome
interactions
insight
basis
adaptation.