bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: Oct. 6, 2023
Abstract
Certain
endangered
Thymelaeaceous
trees
are
major
sources
of
the
fragrant
and
highly
valued
resinous
agarwood,
comprised
hundreds
oxygenated
sesquiterpenoids
(STPs).
Despite
growing
pressure
on
natural
agarwood
sources,
chemical
complexity
STPs
severely
limits
synthetic
production.
Here,
we
catalogued
diversity
in
58
samples
by
two-dimensional
gas
chromatography–mass
spectrometry
partially
recreated
complex
STP
mixtures
through
biology.
We
improved
yields
unicellular
alga
Chlamydomonas
reinhardtii
combinatorial
engineering
to
biosynthesise
nine
macrocyclic
backbones
found
agarwood.
A
bioprocess
following
green-chemistry
principles
was
developed
that
exploits
‘milking’
without
cell
lysis,
solvent–solvent
extraction,
solvent–STP
nanofiltration,
bulk
oxy-functionalisation
obtain
terpene
like
those
This
process
occurs
with
total
solvent
recycling
enables
continuous
Our
synthetic-biology
approach
offers
a
sustainable
alternative
harvesting
complex,
fragrant,
STPs.
Global Change Biology,
Journal Year:
2024,
Volume and Issue:
30(2)
Published: Feb. 1, 2024
Scientific
innovation
is
overturning
conventional
paradigms
of
forest,
water,
and
energy
cycle
interactions.
This
has
implications
for
our
understanding
the
principal
causal
pathways
by
which
tree,
vegetation
cover
(TFVC)
influence
local
global
warming/cooling.
Many
identify
surface
albedo
carbon
sequestration
as
TFVC
affects
Moving
toward
outer
latitudes,
in
particular,
where
snow
more
important,
effects
are
perceived
to
overpower
sequestration.
By
raising
albedo,
deforestation
thus
predicted
lead
cooling,
while
increasing
forest
assumed
result
warming.
Observational
data,
however,
generally
support
opposite
conclusion,
suggesting
poorly
understood.
Most
accept
that
temperatures
influenced
interplay
incoming
shortwave
(SW)
radiation,
partitioning
remaining,
post-albedo,
SW
radiation
into
latent
sensible
heat.
However,
extent
avoidance
heat
formation
first
foremost
mediated
presence
(absence)
water
not
well
both
mediates
availability
on
land
drives
potential
production
(evapotranspiration,
ET).
While
directly
linked
than
cooling/warming,
it
driven
photosynthesis
powers
additional
cloud
top-of-cloud
reflectivity,
drive
cooling.
loss
reduces
storage,
precipitation
recycling,
downwind
rainfall
potential,
driving
reduction
ET
(latent
heat)
formation.
reducing
heat,
formation,
precipitation,
warming
(sensible
formation),
further
diminishes
growth
(carbon
sequestration).
Large-scale
tree
restoration
could,
therefore,
contribute
significantly
temperature
cooling
through
Journal of the American Chemical Society,
Journal Year:
2024,
Volume and Issue:
146(19), P. 13427 - 13437
Published: May 7, 2024
This
study
assesses
the
atmospheric
impact
of
reactions
between
unsaturated
hydrocarbons
such
as
isoprene
and
monoterpenes
peroxy
radicals
containing
various
functional
groups.
We
find
that
alkenes
acyl
have
reaction
rates
high
enough
to
be
feasible
in
atmosphere
lead
molar
mass
accretion
products.
Moreover,
leads
an
alkyl
radical,
which
molecular
oxygen
rapidly
adds.
finding
is
confirmed
by
both
theoretical
calculations
experiments.
The
formed
perester
radical
may
either
undergo
further
H-shift
or
react
bimolecularly.
multifunctional
oxygenated
compounds
through
+
alkene
are
potentially
important
contributors
particle
formation
growth.
Thus,
radical-initiated
oxidation
chemistry
need
included
models.
Green Chemistry,
Journal Year:
2023,
Volume and Issue:
26(5), P. 2577 - 2591
Published: Dec. 19, 2023
We
show
terpene
diversity
of
endangered
agarwoods,
engineering
a
sustainable
green
algal
host
for
production,
and
‘milking’
bioprocess
coupled
to
green-chemistry
functionalisation
produce
terpenes
like
those
found
in
agarwood.
Journal of Aerosol Science,
Journal Year:
2024,
Volume and Issue:
179, P. 106375 - 106375
Published: March 30, 2024
The
formation
of
aerosol
particles
in
the
atmosphere
is
driven
by
gas
to
particle
conversion
extremely
low
volatile
organic
compounds
(ELVOC),
with
a
particularly
saturation
vapor
pressure
(pSat).
Identifying
ELVOCs
and
their
chemical
structures
both
experimentally
theoretically
challenging:
Measuring
very
pSat
difficult,
computing
for
these
often
large
molecules
computationally
costly.
Moreover,
are
underrepresented
available
datasets
atmospheric
species,
which
reduces
value
statistical
models
built
on
such
data.
We
propose
an
active
learning
(AL)
approach
efficiently
identify
data
pool
species
initially
unknown
pSat.
assess
performance
our
AL
comparing
it
traditional
machine
regression
methods,
as
well
ELVOC
classification
based
molecular
properties.
proves
be
highly
efficient
method
identification
limitations
type
can
identify.
also
show
that
or
property-based
methods
adequate
tools
depending
desired
degree
efficiency.
Aerosol Research,
Journal Year:
2024,
Volume and Issue:
2(1), P. 123 - 134
Published: June 4, 2024
Abstract.
The
role
of
organic
compounds
in
atmospheric
new
particle
formation
is
difficult
to
disentangle
due
the
myriad
potentially
important
oxygenated
molecules
(OOMs)
present
atmosphere.
Using
state-of-the-art
quantum
chemical
methods,
we
here
employ
a
novel
approach,
denoted
“cluster-of-functional-groups”
for
studying
involvement
OOMs
cluster
formation.
Instead
usual
“trial-and-error”
approach
testing
ability
experimentally
identified
form
stable
clusters
with
other
nucleation
precursors,
study
which,
and
how
many,
intermolecular
interactions
are
required
given
OOM
clusters.
In
this
manner
can
reverse
engineer
elusive
structure
candidates
that
might
be
involved
enhanced
We
calculated
binding
free
energies
all
combinations
donor
acceptor
functional
groups
investigate
which
most
preferentially
bind
each
precursors
such
as
sulfuric
acid
bases
(ammonia,
methyl-,
dimethyl-
trimethylamine).
find
multiple
carboxyl
lead
substantially
more
compared
groups.
Employing
dynamics
simulations,
hypothetically
composed
stabilize
acid–base
provide
recommendations
potential
multi-carboxylic
tracer
should
explicitly
studied
future.
presented
generally
applicable
employed
many
applications,
ion-induced
elucidating
structural
patterns
facilitate
ice
nucleation.
Environmental Science & Technology Letters,
Journal Year:
2024,
Volume and Issue:
11(10), P. 1053 - 1061
Published: Aug. 30, 2024
Personal
care
products
(PCPs)
contain
diverse
volatile
organic
compounds
(VOCs)
and
routine
use
of
PCPs
indoors
has
important
implications
for
indoor
air
quality
human
chemical
exposures.
This
chamber
study
deployed
aerosol
instrumentation
two
online
mass
spectrometers
to
quantify
VOC
emissions
from
the
five
fragranced
examined
formation
gas-phase
oxidation
particles
upon
ozone-initiated
reactive
VOCs.
The
tested
include
a
perfume,
roll-on
deodorant,
body
spray,
hair
hand
lotion.
Indoor
these
emitted
over
200
VOCs
resulted
in
mixing
ratios
several
parts
per
million.
emission
factors
varied
2
964
mg
g
Atmospheric chemistry and physics,
Journal Year:
2024,
Volume and Issue:
24(20), P. 11679 - 11699
Published: Oct. 21, 2024
Abstract.
The
least
volatile
organic
compounds
participating
in
atmospheric
new-particle
formation
are
very
likely
accretion
products
from
self-
and
cross-reactions
of
peroxy
radicals
(RO2).
It
has
long
been
assumed
that
the
only
possible
product
channel
this
reaction
is
forming
a
peroxide
(RO2+RO2→ROOR+O2),
but
it
recently
discovered
rapid
alkoxy
radical
(RO)
decomposition
may
precede
step
mechanism,
slightly
fragmented
more
stable
ether
(ROR)
or
ester
(RC′(O)OR)
products.
In
work,
implications
new
have
explored
further
by
using
modified
version
Generator
for
Explicit
Chemistry
Kinetics
Organics
Atmosphere
(GECKO-A)
software
to
generate
large
amount
representative
RO2
+
reactive
pairs
formed
oxidation
typical
primary
hydrocarbons
applying
structure–activity
relationships
(SARs)
predict
potential
These
data
analysed
terms
low-volatility
products,
discoveries
presented
on
what
types
especially
efficient
(and
which
surprisingly
inefficient)
at
findings
discussed
relevance
these
channels.
As
generation
rests
several
simplifications
assumptions,
many
open
questions
worthy
later
studies
also
raised.
Abstract.
Monoterpenes
are
released
into
the
atmosphere
in
significant
quantities,
where
they
undergo
various
oxidation
reactions.
Despite
extensive
studies
this
area,
there
still
gaps
that
need
to
be
addressed
fully
understand
processes
occurring
atmosphere.
Recent
findings
suggest
reactions
between
alkenes
and
acyl
peroxy
radicals
can
competitive
under
atmospheric
conditions.
In
study,
we
investigate
of
seven
monoterpenes
with
subsequent
diverse
reactions,
including
accretion,
alkyl
radical
rearrangements,
H-shift,
β-scissions
The
accretion
reaction
leads
release
excess
energy,
which
is
sufficient
open
small
secondary
rings
structures.
This
most
for
sabinene
(39
%)
α-thujene
(20
%).
A
competing
O2
addition,
majority
undergo,
subsequently
leading
formation
radicals.
These
then
react
further,
forming
alkoxy
β-scission
Our
calculations
show
β-pinene,
camphene,
sabinene,
rearrangements
result
capable
undergoing
further
propagation
oxidative
chain,
while
limonene,
α-pinene
α-thujene,
scissions
closed-shell
products
terminate
chain
preferred.
results
indicate
if
indeed
conditions,
their
would
lead
more
oxygenated
compounds
a
higher
molar
mass,
potentially
contributing
organic
aerosol
yields.
Moreover,
study
highlights
significance
stereochemistry
controlling
initiated
by