Microbial
populations
exchange
genetic
material
through
a
process
called
homologous
recombination.
Although
this
has
been
studied
in
particular
organisms,
we
lack
an
understanding
of
its
differential
impact
over
the
genome
and
across
microbes
with
different
life-styles.
We
used
common
analytical
framework
to
assess
representative
set
microorganisms.
Our
results
uncovered
important
trends.
First,
lifestyles
are
differentially
impacted,
endosymbionts
obligate
pathogens
being
those
less
prone
undergo
process.
Second,
certain
elements
such
as
restriction-modification
systems
seem
be
associated
higher
rates
Most
importantly,
recombined
genomes
show
footprints
natural
selection
which
regions
preferentially
contain
genes
that
can
related
specific
ecological
adaptations.
Taken
together,
our
clarify
relative
contributions
factors
modulating
recombination
evidence
for
clear
role
shaping
microbial
driving
Microbes and Infection,
Journal Year:
2015,
Volume and Issue:
17(3), P. 173 - 183
Published: Jan. 29, 2015
Bacterial
pathogens
have
evolved
a
wide
range
of
strategies
to
colonize
and
invade
human
organs,
despite
the
presence
multiple
host
defense
mechanisms.
In
this
review,
we
will
describe
how
pathogenic
bacteria
can
adhere
multiply
at
surface
cells,
some
enter
proliferate
inside
these
finally
may
cross
epithelial
or
endothelial
barriers
get
access
internal
tissues,
leading
severe
diseases
in
humans.
Frontiers in Microbiology,
Journal Year:
2015,
Volume and Issue:
6
Published: July 21, 2015
Candidate
phylum
OD1
bacteria
(also
referred
to
as
Parcubacteria)
have
been
identified
in
a
broad
range
of
anoxic
environments
through
community
survey
analysis.
Although
none
these
species
isolated
the
laboratory,
several
genome
sequences
reconstructed
from
metagenomic
sequence
data
and
single-cell
sequencing.
The
organisms
small
(generally
<1
Mb)
genomes
with
severely
reduced
metabolic
capabilities.
We
8
partial
near-complete
oxic
groundwater
samples,
compared
them
against
existing
genomic
data.
conserved
core
gene
set
comprises
202
genes,
or
~28%
complement.
"Housekeeping"
genes
for
biosynthesis
peptidoglycan
Type
IV
pilus
production
are
conserved.
Gene
sets
cofactors,
amino
acids,
nucleotides,
fatty
acids
absent
entirely
greatly
reduced.
only
aspects
energy
metabolism
non-oxidative
branch
pentose-phosphate
shunt
central
glycolysis.
These
also
lack
some
activities
almost
all
other
known
bacterial
genomes,
including
signal
recognition
particle,
pseudouridine
synthase
A,
FAD
synthase.
Pan-genome
analysis
indicates
genotypic
diversity
perhaps
highly
fluid
complement,
indicating
historical
adaptation
wide
growth
high
degree
specialization.
were
examined
signatures
suggesting
either
free-living,
streamlined
lifestyle,
symbiotic
lifestyle.
biosynthetic
capabilities
DNA
repair,
along
presence
potential
attachment
adhesion
proteins
suggest
that
Parcubacteria
ectosymbionts
parasites
organisms.
potentially
mediate
cell-cell
contact
suggests
partner/prey
across
phylum.
FEMS Microbiology Reviews,
Journal Year:
2014,
Volume and Issue:
39(1), P. 134 - 154
Published: Nov. 26, 2014
Prokaryotes
have
engineered
sophisticated
surface
nanomachines
that
allowed
them
to
colonize
Earth
and
thrive
even
in
extreme
environments.
Filamentous
machineries
composed
of
type
IV
pilins,
which
are
associated
with
an
amazing
array
properties
ranging
from
motility
electric
conductance,
arguably
the
most
widespread
since
distinctive
proteins
dedicated
their
biogenesis
found
known
species
prokaryotes.
Several
decades
investigations,
starting
pili
then
a
variety
related
systems
both
bacteria
archaea,
outlined
common
molecular
structural
bases
for
these
nanomachines.
Using
as
paradigm,
we
will
highlight
this
review
aspects
key
biological
differences
group
filamentous
structures.
Molecules,
Journal Year:
2017,
Volume and Issue:
22(8), P. 1370 - 1370
Published: Aug. 18, 2017
Infectious
diseases
can
be
transmitted
and
they
cause
a
significant
burden
on
public
health
globally.
They
are
the
greatest
world
killers
it
is
estimated
that
responsible
for
demise
of
over
17
million
people
annually.
The
impact
these
greater
in
developing
countries.
People
with
compromised
immune
systems
children
most
affected.
may
caused
by
bacteria,
viruses,
protozoa.
treatment
infectious
hampered
simultaneous
resistance
to
multiple
drugs,
indicating
there
serious
pressing
need
develop
new
therapeutics
overcome
drug
resistance.
This
review
will
focus
recent
reports
metal-based
nanoparticles
potential
their
biological
efficacy
(in
vitro
vivo).
Frontiers in Microbiology,
Journal Year:
2015,
Volume and Issue:
06
Published: April 23, 2015
Bacteriophages
can
influence
the
abundance,
diversity
and
evolution
of
bacterial
communities.
Several
bacteriophages
have
been
reported
to
add
virulence
factors
their
host
increase
virulence.
However,
lytic
also
exert
a
selective
pressure
allowing
proliferation
strains
with
reduced
This
reduction
be
explained
because
use
structures
present
on
surface
as
receptors,
which
in
different
species.
Therefore,
modifications
these
receptors
will
resistant
bacteriophage
infection
may
exhibit
mini-review
summarizes
reports
bacteriophage-resistant
reductions
virulence,
it
discusses
potential
consequences
phage
therapy
select
attenuated
for
vaccines.
Annual Review of Genetics,
Journal Year:
2019,
Volume and Issue:
53(1), P. 217 - 237
Published: Aug. 21, 2019
Transformation
is
a
widespread
mechanism
of
horizontal
gene
transfer
in
bacteria.
DNA
uptake
to
the
periplasmic
compartment
requires
DNA-uptake
pilus
and
DNA-binding
protein
ComEA.
In
gram-negative
bacteria,
first
pulled
toward
outer
membrane
by
retraction
then
taken
up
binding
ComEA,
acting
as
Brownian
ratchet
prevent
backward
diffusion.
A
similar
probably
operates
gram-positive
bacteria
well,
but
these
systems
have
been
less
well
characterized.
Transport,
defined
movement
single
strand
transforming
cytosol,
channel
ComEC.
Although
understood
about
this
process,
it
may
be
driven
proton
symport.
review
we
also
describe
various
phenomena
that
are
coordinated
with
expression
competence
for
transformation,
such
fratricide,
kin-discriminatory
killing
neighboring
cells,
competence-mediated
growth
arrest.
Virulence,
Journal Year:
2021,
Volume and Issue:
12(1), P. 723 - 753
Published: April 12, 2021
Clostridium
perfringens
is
an
extremely
versatile
pathogen
of
humans
and
livestock,
causing
wound
infections
like
gas
gangrene
(clostridial
myonecrosis),
enteritis/enterocolitis
(including
one
the
most
common
human
food-borne
illnesses),
enterotoxemia
(where
toxins
produced
in
intestine
are
absorbed
damage
distant
organs
such
as
brain).
The
virulence
this
Gram-positive,
spore-forming,
anaerobe
largely
attributable
to
its
copious
toxin
production;
diverse
actions
roles
infection
these
now
becoming
established.
Most
C.
genes
encoded
on
conjugative
plasmids,
including
pCW3-like
recently
discovered
pCP13-like
plasmid
families.
Production
highly
regulated
via
processes
involving
two-component
regulatory
systems,
quorum
sensing
and/or
sporulation-related
alternative
sigma
factors.
Non-toxin
factors,
degradative
enzymes
sialidases,
also
being
implicated
pathogenicity
bacterium.
These
factors
can
promote
action
vitro
and,
perhaps
vivo,
enhance
intestinal
colonization,
e.g.
NanI
sialidase
increases
adherence
tissue
generates
nutrients
for
growth,
at
least
vitro.
possible
contributions
many
other
adhesins,
capsule
biofilms,
await
future
study.
Journal of Bacteriology,
Journal Year:
2014,
Volume and Issue:
197(5), P. 819 - 832
Published: Dec. 16, 2014
ABSTRACT
Clostridium
difficile
is
an
anaerobic
Gram-positive
bacterium
that
causes
intestinal
infections
with
symptoms
ranging
from
mild
diarrhea
to
fulminant
colitis.
Cyclic
diguanosine
monophosphate
(c-di-GMP)
a
bacterial
second
messenger
typically
regulates
the
switch
motile,
free-living
sessile
and
multicellular
behaviors
in
Gram-negative
bacteria.
Increased
intracellular
c-di-GMP
concentration
C.
was
recently
shown
reduce
flagellar
motility
increase
cell
aggregation.
In
this
work,
we
investigated
role
of
primary
type
IV
pilus
(T4P)
locus
c-di-GMP-dependent
Inactivation
two
T4P
genes,
pilA1
(CD3513)
pilB1
(CD3512),
abolished
formation
significantly
reduced
aggregation
under
high
conditions.
preceded
by
putative
riboswitch,
predicted
be
transcriptionally
active
upon
binding.
Consistent
our
prediction,
increased
transcript
levels
genes.
addition,
single-round
vitro
transcription
assays
confirmed
downstream
terminator
dose
dependent
specific
binding
riboswitch
aptamer.
These
results
support
model
which
gene
upregulated
as
result
its
upstream
activating
promoting
.
Nature Communications,
Journal Year:
2019,
Volume and Issue:
10(1)
Published: Sept. 13, 2019
Abstract
Candidate
phyla
radiation
(CPR)
bacteria
separate
phylogenetically
from
other
bacteria,
but
the
organismal
distribution
of
their
protein
families
remains
unclear.
Here,
we
leveraged
sequences
thousands
uncultivated
organisms
and
identified
that
co-occur
in
genomes,
thus
are
likely
foundational
for
lineage
capacities.
Protein
family
presence/absence
patterns
cluster
CPR
together,
away
all
archaea,
partly
due
to
proteins
without
recognizable
homology
bacteria.
Some
involved
cell-cell
interactions
potentially
important
episymbiotic
lifestyles.
The
diversity
combinations
may
exceed
Over
bacterial
tree,
broadly
recapitulate
phylogenetic
structure,
suggesting
persistence
core
sets
since
divergence.
could
have
arisen
an
episode
dramatic
heterogeneous
genome
reduction
or
a
protogenote
community
co-evolved
with