The prevalence of carbapenem-resistant Enterobacterales and the emergence of novel ST11-KL30 carbapenem-resistant Klebsiella pneumoniae in Xinjiang, China DOI Creative Commons
Feng Zhao,

X T Hou,

Gang Sun

et al.

Journal of Global Antimicrobial Resistance, Journal Year: 2024, Volume and Issue: unknown

Published: Oct. 1, 2024

Language: Английский

Antimicrobial resistance of clinical bacterial isolates in China: current status and trends DOI Creative Commons
Xiaohua Qin, Li Ding, Min Hao

et al.

JAC-Antimicrobial Resistance, Journal Year: 2024, Volume and Issue: 6(2)

Published: March 5, 2024

Abstract Antimicrobial resistance surveillance systems have been established in China. Two representative national networks are the China Surveillance Network (CHINET) and Resistance System (CARSS), both of which were 2005. For all clinical isolates collected these networks, ratio Gram-negative bacilli to Gram-positive cocci was approximately 7:3 during past 18 years. Generally, a higher antimicrobial profile The prevalence ESBLs Escherichia coli is as high 50%. Acinetobacter baumannii-calcoaceticus complex (ABC) has profile, with carbapenem rate 66%. However, carbapenem-resistant ABC also shown decreasing trend from 2018 2022. vancomycin-resistant Enterococcus low, MRSA Pseudomonas aeruginosa showed trends 2005 CHINET data demonstrated that Klebsiella pneumoniae remarkable increasing 2.9% (imipenem resistance) 25.0% 2018, then slightly decreased 22.6% may reflect stewardship efforts China: professional consensus on rational use carbapenems issued by National Health Commission well implemented nationally; after that,

Language: Английский

Citations

18

Transmission Dynamics and Novel Treatments of High Risk Carbapenem-Resistant Klebsiella pneumoniae: The Lens of One Health DOI Creative Commons

Jiaying Zhu,

Taoyu Chen, Yanmin Ju

et al.

Pharmaceuticals, Journal Year: 2024, Volume and Issue: 17(9), P. 1206 - 1206

Published: Sept. 12, 2024

The rise of antibiotic resistance and the dwindling antimicrobial pipeline have emerged as significant threats to public health. emergence carbapenem-resistant

Language: Английский

Citations

10

Understanding carbapenem-resistant hypervirulent Klebsiella pneumoniae: Key virulence factors and evolutionary convergence DOI Creative Commons
Tao Chen,

Liya Ying,

Luying Xiong

et al.

hLife, Journal Year: 2024, Volume and Issue: unknown

Published: June 1, 2024

The emergence of hypervirulence (hv) and carbapenem resistance (CR) as distinct evolutionary directions for Klebsiella pneumoniae presents a significant threat in clinical settings. However, recent years, there has been growing identification K. strains that integrate both phenotypes, resulting severe outcomes. Carbapenem-resistant hypervirulent (CRhvKP) typically emerges through the acquisition plasmids carrying either virulence or CR-encoded genes by carbapenem-resistant pneumoniae. Furthermore, hybrid plasmid can confer combination CR hv. CRhvKP cause variety infections, including pneumonia, urinary tract bloodstream liver abscesses, other related conditions. While sequence type 11 (ST11) dominates majority China, molecular factors responsible success ST11 largely remain unknown. Here, we provide an overview current understanding variation distribution crucial determinants, mechanisms driving merging hv CR, potential influencing epidemiological CRhvKP. This research aims to contribute comprehensive complexities surrounding It is imperative underscore development therapies, precision medicine, vaccine strategies pivotal approaches effectively combating Considering widespread prevalence CRhvKP, prioritized, multifaceted approach encompassing infection control, active surveillance, innovative therapeutics essential.

Language: Английский

Citations

9

Epidemiology of carbapenem-resistant Klebsiella pneumoniae in China and the evolving trends of predominant clone ST11: a multicentre, genome-based study DOI
Qiucheng Shi, Zhi Ruan, Ping Zhang

et al.

Journal of Antimicrobial Chemotherapy, Journal Year: 2024, Volume and Issue: 79(9), P. 2292 - 2297

Published: July 13, 2024

Carbapenem-resistant Klebsiella pneumoniae (CRKP) is a major nosocomial infectious pathogen with rapidly increasing prevalence. The genomic epidemiological characteristics of CRKP nationwide, especially the evolving trends within predominant clones, should be evaluated clearly.

Language: Английский

Citations

7

Bacterial strain nomenclature in the genomic era: Life Identification Numbers using a gene-by-gene approach DOI Creative Commons
Féderica Palma, Mélanie Hennart, Keith A. Jolley

et al.

bioRxiv (Cold Spring Harbor Laboratory), Journal Year: 2024, Volume and Issue: unknown

Published: March 12, 2024

Abstract Unified strain taxonomies are crucial for fostering international communication in microbiological research and the epidemiological surveillance of bacterial pathogens. While multilocus sequence typing (MLST) has served as a foundation taxonomy two decades, whole genome sequencing enables more precise classifications significantly improves discriminatory resolution. The core genome-wide extension MLST (known cgMLST) thus holds great promise genotyping classification, but its implementation faces challenges that include missing data, potential instability cluster-based nomenclatures, necessity to ensure backwards compatibility with identifiers. Life Identification Number (LIN) codes offer solution by providing multi-level classification groups inherently stable. Here, we present, consolidate, extend cgMLST-based LIN code approach. We first develop nicknaming system prefixes, which flexible human-readable nomenclatures. Using Klebsiella pneumoniae (Kp) an example, nicknames were attributed inheritance from identifiers, perpetuating legacy nomenclatures genomic era. show while 7-gene sometimes conflates unrelated sublineages into same ST, highly concordant phylogenetic relationships. implement this novel code-based nomenclature BIGSdb platform, illustrate, Pathogenwatch, how it can also be used other epidemiology platforms. Finally, demonstrate value tracking diversity within high-risk internationally disseminated clonal Kp protracted outbreaks. Given stability, precision, flexibility, recommend adoption taxonomic approach suggest is widely applicable

Language: Английский

Citations

5

A novel depolymerase specifically degrades the K62-type capsular polysaccharide of Klebsiella pneumoniae DOI Creative Commons
Yuqing Pan,

Huagen Chen,

Rui‐Jing Ma

et al.

One Health Advances, Journal Year: 2024, Volume and Issue: 2(1)

Published: Feb. 16, 2024

Abstract Carbapenem-resistant Klebsiella pneumoniae (CRKP) is emerging as an imminent threat to worldwide public health because of its high level antimicrobial resistance, which can result in severe and challenging-to-treat infections. The capsular polysaccharide (CPS) bacteria well acknowledged a crucial virulence factor that shields K. from the host’s innate immune system. Polysaccharide depolymerase, encoded by bacteriophages, hydrolyze CPS may be promising approach for treating In this study, we identified novel K62-type capsule depolymerase (K62-Dpo30) phage SH-KP2492. We demonstrated K62-Dpo30 could specifically degrade strains promote susceptibility serum neutrophil killing. Furthermore, our findings highlight potential reliable typing tool.

Language: Английский

Citations

4

Genomic typing, antimicrobial resistance gene, virulence factor and plasmid replicon database for the important pathogenic bacteria Klebsiella pneumoniae DOI Creative Commons
Andrey Shelenkov, Anna A. Slavokhotova, Yulia V. Mikhaylova

et al.

BMC Microbiology, Journal Year: 2025, Volume and Issue: 25(1)

Published: Jan. 6, 2025

The infections of bacterial origin represent a significant problem to the public healthcare worldwide both in clinical and community settings. Recent decade was marked by limiting treatment options for due growing antimicrobial resistance (AMR) acquired transferred various species, especially ones causing healthcare-associated infections, which has become dangerous issue noticed World Health Organization. Numerous reports shown that spread AMR is often driven several species-specific lineages usually called 'global clones high risk'. Thus, it essential track isolates belonging such investigate mechanisms their pathogenicity acquisition. Currently, whole genome-based analysis more used these purposes, including epidemiological surveillance mobile elements involved transfer. However, spite exponential growth available genomes, representation lack uniformity availability supporting metadata, creates bottleneck investigations. In this database, we provide results thorough genomic 61,857 genomes highly pathogen Klebsiella pneumoniae. Important isolate typing information multilocus sequence (MLST) types (STs), assignment known global clones, capsular (KL) lipooligosaccharide (O) types, presence CRISPR-Cas systems, cgMLST profiles are given, regarding AMR, virulence genes plasmid replicons within provided. This database freely under CC BY-NC-SA at https://doi.org/10.5281/zenodo.11069018 . will facilitate selection proper reference sets any It be helpful investigations field K. pneumoniae epidemiology, as well development prevention measures against important pathogen.

Language: Английский

Citations

0

Bacteriophage-derived depolymerase: a review on prospective antibacterial agents to combat Klebsiella pneumoniae DOI

Xin Jiao,

Menglu Wang, Yan‐Xia Liu

et al.

Archives of Virology, Journal Year: 2025, Volume and Issue: 170(4)

Published: March 8, 2025

Language: Английский

Citations

0

Clonal transmission of a ceftazidime–avibactam-resistant hypervirulent Klebsiella pneumoniae KL64-ST11 strains harboring bla NDM-1 , bla KPC-2 , and ompk36 deletion DOI Creative Commons
Jun Li,

Zhaojun Liu,

Haolan Wang

et al.

Research Square (Research Square), Journal Year: 2025, Volume and Issue: unknown

Published: March 31, 2025

Abstract Ceftazidime–avibactam (CZA) exhibits promising activity against carbapenem-resistant Klebsiella pneumoniae (CRKP). However, CZA-resistant CRKP (CRKPCZA−R) strains have been emerging. This study explored the mechanism underlying CZA resistance in these strains. CRKPCZA−R was screened from non-repetitive at our hospital January 1, 2018 to October 30, 2021. The drug and homology were analyzed through carbapenemase phenotype detection next-generation sequencing. In total, 67 of 623 isolates (10.8%) CRKPCZA−R. most prevalent resistant genes blaNDM−1 (44.8%, 30/67), followed by blaIMP−4 (9.0%, 6/67), blaNDM−5 (7.5%, 5/67), blaNDM−4 (1.5%, 1/67). Furthermore, 37.3% (25/67) simultaneously harbored more than two carbapenemase-encoding genes. enzyme inhibitor enhancement method detected with high sensitivity (82.1%), particularly for harboring a single (100%). presence or limited its ability. Notably, 21 ST11-KL64 exhibiting blaNDM−1, blaKPC−2, also ompk36 deletion, 17 co-carried virulence gene markers, suggesting clonal transmission. Patients infected older serious other drug-resistant strains, which higher MIC50 fosfomycin conclusion, rate relatively high, could be attributed transmission MBL Although can detect carbapenemases specificity, it might ability that produce carbapenemases. both blaKPC−2 should closely monitored.

Language: Английский

Citations

0

KpnK48 clone driving hypervirulent carbapenem-resistant Escherichia coli epidemics: Insights into its evolutionary trajectory similar to Klebsiella pneumoniae DOI
Meng Wang, Longyang Jin, Ruobing Wang

et al.

Drug Resistance Updates, Journal Year: 2025, Volume and Issue: unknown, P. 101243 - 101243

Published: April 1, 2025

Language: Английский

Citations

0