RNA epigenetic modifications in digestive tract cancers: Friends or foes DOI Creative Commons

Zekai Nian,

Ming Deng, Lele Ye

et al.

Pharmacological Research, Journal Year: 2024, Volume and Issue: 206, P. 107280 - 107280

Published: June 22, 2024

Digestive tract cancers are among the most common malignancies worldwide and have high incidence mortality rates. Thus, discovery of more effective diagnostic therapeutic targets is urgently required. The development technologies to accurately detect RNA modification has led identification numerous chemical modifications in humans (epitranscriptomics) that involved occurrence digestive cancers. can cooperatively regulate gene expression facilitate normal physiological functions system. However, dysfunction relevant RNA-modifying enzymes ("writers," "erasers," "readers") lead Consequently, targeting dysregulated enzyme activity could represent a potent strategy for treatment In this review, we summarize widely studied roles mechanisms (m6A, m1A, m5C, m7G, A-to-I editing, pseudouridine [Ψ]) relation cancers, highlight crosstalk between modifications, discuss their interactions system microbiota during carcinogenesis. clinical significance novel methods based on also discussed. This review will help guide future research into resistant current therapeutics.

Language: Английский

Targeting IGF2BP3 in Cancer DOI Open Access
Xin Liu, Jiayu Chen, Wenliang Chen

et al.

International Journal of Molecular Sciences, Journal Year: 2023, Volume and Issue: 24(11), P. 9423 - 9423

Published: May 29, 2023

RNA-binding proteins (RBPs) can regulate multiple pathways by binding to RNAs, playing a variety of functions, such as localization, stability, and immunity. In recent years, with the development technology, researchers have discovered that RBPs play key role in N6-methyladenosine (m6A) modification process. M6A methylation is most abundant form RNA eukaryotes, which defined on sixth N atom adenine RNA. Insulin-like growth factor 2 mRNA-binding protein 3 (IGF2BP3) one components m6A proteins, plays an important decoding marks performing various biological functions. IGF2BP3 abnormally expressed many human cancers, often associated poor prognosis. Here, we summarize physiological organisms describe its mechanism tumors. These data suggest may be valuable therapeutic target prognostic marker future.

Language: Английский

Citations

29

HKDC1 reprograms lipid metabolism to enhance gastric cancer metastasis and cisplatin resistance via forming a ribonucleoprotein complex DOI
Ping Zhao,

Fei Yuan,

Lijuan Xu

et al.

Cancer Letters, Journal Year: 2023, Volume and Issue: 569, P. 216305 - 216305

Published: July 7, 2023

Language: Английский

Citations

27

CircNFATC3 promotes the proliferation of gastric cancer through binding to IGF2BP3 and restricting its ubiquitination to enhance CCND1 mRNA stability DOI Creative Commons

Feifei Yang,

Qiang Ma, Bo Huang

et al.

Journal of Translational Medicine, Journal Year: 2023, Volume and Issue: 21(1)

Published: June 20, 2023

Abstract Background Insulin like growth factor II mRNA binding protein 3 (IGF2BP3) is an RNA with multiple roles in regulation of gene expression at the post-transcriptional level and implicated tumorigenesis progression numerous cancers including gastric cancer (GC). Circular RNAs (circRNAs) are a diverse endogenous noncoding population that have important regulatory cancer. However, circRNAs regulate IGF2BP3 GC largely unknown. Methods CircRNAs bound to were screened cells using immunoprecipitation sequencing (RIP-seq). The identification localization circular nuclear activated T (circNFATC3) identified Sanger sequencing, RNase R assays, qRT-PCR, nuclear-cytoplasmic fractionation RNA-FISH assays. CircNFATC3 human tissues adjacent normal measured by qRT-PCR ISH. biological role circNFATC3 was confirmed vivo vitro experiments. Furthermore, RIP, RNA-FISH/IF, IP rescue experiments performed uncover interactions between circNFATC3, cyclin D1 (CCND1). Results We GC-associated circRNA, interacted IGF2BP3. significantly overexpressed positively associated tumor volume. Functionally, proliferation decreased after knockdown vitro. Mechanistically, cytoplasm, which enhanced stability preventing ubiquitin E3 ligase TRIM25-mediated ubiquitination, thereby enhancing axis IGF2BP3-CCND1 promoting CCND1 stability. Conclusions Our findings demonstrate promotes stabilizing enhance Therefore, potential novel target for treatment GC.

Language: Английский

Citations

25

A novel peptide PDHK1-241aa encoded by circPDHK1 promotes ccRCC progression via interacting with PPP1CA to inhibit AKT dephosphorylation and activate the AKT-mTOR signaling pathway DOI Creative Commons
Bo Huang, Junwu Ren, Qiang Ma

et al.

Molecular Cancer, Journal Year: 2024, Volume and Issue: 23(1)

Published: Feb. 15, 2024

Abstract Background Clear cell renal carcinoma (ccRCC) is the most prevalent kidney cancer with high aggressive phenotype and poor prognosis. Accumulating evidence suggests that circRNAs have been identified as pivotal mediators in cancers. However, role of ccRCC progression remains elusive. Methods The differentially expressed 4 paired human adjacent noncancerous tissues were screened using circRNA microarrays candidate target was selected based on expression level weighted gene correlation network analysis (WGCNA) omnibus (GEO) database. CircPDHK1 ( n = 148) evaluated along clinically relevant information. RT-qPCR, RNase R digestion, actinomycin D (ActD) stability test conducted to identify characteristics circPDHK1. subcellular distribution circPDHK1 analyzed by fractionation assay fluorescence situ hybridization (FISH). Immunoprecipitation-mass spectrometry (IP-MS) immunofluorescence (IF) employed evaluate protein-coding ability cells transfected siRNAs, plasmids or lentivirus approach, proliferation, migration invasion, well tumorigenesis metastasis nude mice assessed clarify functional roles its encoded peptide PDHK1-241aa. RNA-sequencing, western blot analysis, immunoprecipitation (IP) chromatin (ChIP) assays further underlying mechanisms regulated Results upregulated closely related WHO/ISUP stage, T distant metastasis, VHL mutation Ki-67 levels. had a internal ribosome entry site (IRES) novel Functionally, we confirmed PDHK1-241aa not promoted invasion ccRCC. Mechanistically, activated HIF-2A at transcriptional level. interacted PPP1CA, causing relocation PPP1CA nucleus. This thereby inhibited AKT dephosphorylation AKT-mTOR signaling pathway. Conclusions Our data indicated circPDHK1-encoded promotes interacting inhibit dephosphorylation. study provides insights into multiplicity highlights potential use therapeutic for

Language: Английский

Citations

17

circCDK13-loaded small extracellular vesicles accelerate healing in preclinical diabetic wound models DOI Creative Commons
Qilin Huang,

Ziqiang Chu,

Zihao Wang

et al.

Nature Communications, Journal Year: 2024, Volume and Issue: 15(1)

Published: May 9, 2024

Abstract Chronic wounds are a major complication in patients with diabetes. Here, we identify therapeutic circRNA and load it into small extracellular vesicles (sEVs) to treat diabetic preclinical models. We show that circCDK13 can stimulate the proliferation migration of human dermal fibroblasts epidermal keratinocytes by interacting insulin-like growth factor 2 mRNA binding protein 3 an N6-Methyladenosine-dependent manner enhance CD44 c-MYC expression. engineered sEVs overexpress local subcutaneous injection male db/db mouse streptozotocin-induced type I rats could accelerate wound healing skin appendage regeneration. Our study demonstrates delivery may present option for treatment.

Language: Английский

Citations

15

Comprehensive review of amino acid transporters as therapeutic targets DOI
Ran Xia,

Hai-Feng Peng,

Xing Zhang

et al.

International Journal of Biological Macromolecules, Journal Year: 2024, Volume and Issue: 260, P. 129646 - 129646

Published: Jan. 23, 2024

Language: Английский

Citations

9

Emerging roles of circular RNAs in tumorigenesis, progression, and treatment of gastric cancer DOI Creative Commons
Qiang Ma,

Feifei Yang,

Bin Xiao

et al.

Journal of Translational Medicine, Journal Year: 2024, Volume and Issue: 22(1)

Published: Feb. 27, 2024

Abstract With an estimated one million new cases reported annually, gastric cancer (GC) ranks as the fifth most diagnosed malignancy worldwide. The early detection of GC remains a major challenge, and prognosis worsens either when patients develop resistance to chemotherapy or radiotherapy metastasizes. precise pathogenesis underlying is not well understood, which further complicates its treatment. Circular RNAs (circRNAs), recently discovered class noncoding that originate from parental genes through “back-splicing”, have been shown play key role in various biological processes both eukaryotes prokaryotes. CircRNAs linked cardiovascular diseases, diabetes, hypertension, Alzheimer's disease, occurrence progression tumors. Prior studies established circRNAs crucial GC, impacting tumorigenesis, diagnosis, progression, therapy resistance. This review aims summarize how contribute tumorigenesis examine their roles development drug resistance, discuss potential biotechnological drugs, response therapeutic drugs microorganism GC.

Language: Английский

Citations

9

CircZBTB44 promotes renal carcinoma progression by stabilizing HK3 mRNA structure DOI Creative Commons
Tushuai Li, Yue Gu, Baocai Xu

et al.

Molecular Cancer, Journal Year: 2023, Volume and Issue: 22(1)

Published: April 27, 2023

Abstract CircZBTB44 (hsa_circ_0002484) has been identified to be upregulated in renal cell carcinoma (RCC) tissues, while its role and contribution RCC remain elusive. We confirmed the overexpression of circZBTB44 cells compared normal kidney HK-2. knockdown suppressed viability, proliferation, migration inhibited tumorigenesis xenograft mouse models. Heterogeneous Nuclear Ribonucleoprotein C (HNRNPC) Insulin-like growth factor 2 mRNA-binding protein 3 (IGF2BP3) are two RNA binding proteins circZBTB44. HNRNPC facilitated translocation from nuclei cytoplasm via m6A modification, facilitating interaction IGF2BP3 cells. Furthermore, Hexokinase (HK3) expression by HK3 exerted oncogenic effects on malignant behaviors tumor growth. In co-culture with macrophages, promoted M2 polarization macrophages up-regulating HK3. summary, mediated up-regulate HK3, promoting proliferation vitro vivo . The results study shed new light targeted therapy RCC.

Language: Английский

Citations

15

Regulatory mechanisms and therapeutic implications of insulin-like growth factor 2 mRNA-binding proteins, the emerging crucial m6A regulators of tumors DOI Creative Commons
Heng Zhou, Qiang Sun,

Ming-Liang Feng

et al.

Theranostics, Journal Year: 2023, Volume and Issue: 13(12), P. 4247 - 4265

Published: Jan. 1, 2023

Insulin-like growth factor 2 mRNA-binding proteins (IGF2BPs) serve essential biological functions as post-transcriptional performers, participating in the acquisition or maintenance of tumor hallmarks due to their distinct protein structures.Emerging evidence indicates that IGF2BPs belong class III type RNA N 6 -methyladenosine (m A) modification readers, controlling stability, storage, localization, metabolism, and translation multiple vital bioprocesses, particularly tumorigenesis progression.Here, we discuss underlying regulatory mechanisms pathological which act m A readers context pathogenesis multidrug resistance.Furthermore, highlight potential drug targets clinical treatment.Hence, precise novel therapeutic approaches could be uncovered by targeting epigenetic heterogeneity.

Language: Английский

Citations

14

Helicobacter pylori upregulates circPGD and promotes development of gastric cancer DOI Creative Commons

Wenjun Zhao,

Zhendong Yao,

Jia Cao

et al.

Journal of Cancer Research and Clinical Oncology, Journal Year: 2024, Volume and Issue: 150(2)

Published: Feb. 26, 2024

Abstract Purpose Helicobacter pylori ( H. ) has unique biochemical traits and pathogenic mechanisms, which make it a substantial cause of gastrointestinal cancers. Circular RNAs (circRNAs) have concurrently been identified as an important participating factor in the pathophysiology several different However, underlying processes putative interactions between circRNAs received very little attention. To address this issue, we explored interaction to investigate how they might jointly contribute occurrence development gastric cancer. Methods Changes circPGD expression were detected using qRT-PCR. Cell proliferation migration changes assayed by colony formation, CCK-8 assay transwell assay. Apoptosis was measured flow cytometry. Western blot conducted detect cell migration, apoptosis, inflammation-associated proteins. QRT-PCR used measure factors. Results We found that induced increased infected human cells facilitated cancer progression three ways promoting enhancing inflammatory response, inhibiting apoptosis. Conclusions CircPGD appears play role -related may thus be viable, novel target for therapeutic intervention.

Language: Английский

Citations

5