Understanding the triacylglycerol-based carbon anabolic differentiation in Cyperus esculentus and Cyperus rotundus developing tubers via transcriptomic and metabolomic approaches DOI Creative Commons
Honglin Zhang,

Zhitao Zhu,

Yining Di

et al.

Research Square (Research Square), Journal Year: 2024, Volume and Issue: unknown

Published: Dec. 4, 2024

Abstract Background Yellow nutsedge (YSD, Cyperus esculentus) and purple (XFZ, rotundus), closely related Cyperaceae species, exhibit significant differences in triacylglycerol (TAG) accumulation within their tubers, a key factor carbon flux repartitioning. Previous studies have attempted to elucidate the anabolic discrepancies between these two however, lack of comprehensive genome-wide annotation has hindered detailed understanding underlying molecular mechanisms. Results This study utilizes transcriptomic analysis, supported by YSD reference genome, metabolomic profiling uncover mechanisms TAG-based differentiation developing tubers XFZ germplasms harvested Yunnan province, China. Our findings indicate distinct expression patterns regulatory genes involved TAG biosynthesis lipid droplet formation, including ABI3 transcriptional factor, rate-limiting enzymes GPAT3/6/9 DGAT2/3, oleosin caleosin homologs. Furthermore, our omics data suggest that gene are not sole contributors diverse tuber compositions. Instead, complex interactions among highly regulated catalytic reactions, governing carbohydrate, protein, species-specific metabolite metabolisms, collectively contribute pronounced primarily evident accumulation, as well starch properties mature tubers. Conclusion offers new metabolic insights into high-value underground non-photosynthetic tissues species. The analyses aim deepen which could significantly enhance resource utilization industrial applications contemporary agricultural production.

Language: Английский

Soil Microorganisms: Their Role in Enhancing Crop Nutrition and Health DOI Creative Commons

Qingxia Chen,

Yingjie Song, Yuxing An

et al.

Diversity, Journal Year: 2024, Volume and Issue: 16(12), P. 734 - 734

Published: Nov. 29, 2024

Maintaining soil health is fundamental to sustaining agricultural productivity, however, the intricate role of microbial diversity in this process not fully understood. Current research acknowledges that microorganisms including bacteria, fungi, and archaea are pivotal driving essential functions such as nutrient cycling, organic matter decomposition, disease suppression. However, impacts global environmental changes intensive practices on these remain a critical gap literature. This significant because decline could severely compromise health, consequently crop productivity. Here, we provide comprehensive review factors influencing examine their implications for performance. We assess both natural pH, moisture, temperature, vegetation type well human-induced tillage systems fertilizer application. The synthesizes recent findings how shape communities functional roles structure formation, Our analysis highlights mechanisms by which enhances plant growth yield, addressing understanding direct links between outcomes. underscore urgent need sustainable protect enhance safeguard long-term fertility By challenges manipulating integrating ecology with management practices, advances our ability sustain face changes.

Language: Английский

Citations

8
Dam inundation reduces ecosystem multifunctionality following riparian afforestation in the Three Gorges Reservoir Region DOI
Jie Zheng, Muhammad Arif, Lijuan Li

et al.

Journal of Environmental Management, Journal Year: 2024, Volume and Issue: 360, P. 121188 - 121188

Published: May 17, 2024

Language: Английский

Citations

4
Fungal Diversity and Network Complexity Sustain Soil Multifunctionality Across Europe DOI
Xingguo Han,

Anna Doménech-Pascual,

Jonathan Donhauser

et al.

Published: Jan. 1, 2025

Language: Английский

Citations

0
Long-term storage of rainwater: assessing the efficacy of disinfection methods on water quality and pathogenic species dynamics DOI

Haoqian Shi,

Xudong Huang,

Wanli Hou

et al.

Environmental Research, Journal Year: 2025, Volume and Issue: 271, P. 121066 - 121066

Published: Feb. 7, 2025

Language: Английский

Citations

0
<p><a rel="nofollow"><b><span>Fungal diversity and network complexity sustain </span></b></a><a rel="nofollow"><b><span>soil multifunctionality </span></b></a><b><span>across Europe</span></b><span></span></p> DOI
Xingguo Han,

Anna Doménech-Pascual,

Jonathan Donhauser

et al.

Published: Jan. 1, 2025

Citations

0
Trends in alpha diversity, community composition, and network complexity of rare, intermediate, and abundant bacterial taxa along a latitudinal gradient and their impact on ecosystem multifunctionality DOI Creative Commons
Rong Tang, Shuaifeng Li, Xiaobo Huang

et al.

Forest Ecosystems, Journal Year: 2025, Volume and Issue: unknown, P. 100323 - 100323

Published: March 1, 2025

Language: Английский

Citations

0
Soil–Plant Indicators for Assessing Nutrient Cycling and Ecosystem Functionality in Urban Forestry DOI Creative Commons
Cristina Macci, Francesca Vannucchi, Andrea Scartazza

et al.

Urban Science, Journal Year: 2025, Volume and Issue: 9(3), P. 82 - 82

Published: March 13, 2025

Nature-based solutions (NbS) are multidimensional, resource-efficient, and sustainable growth approaches to cope with current challenges, including biodiversity carbon loss, pollution, climate change land degradation. Amongst NbS, urban forestry is an important tool enhance environmental resilience sustainability, providing useful ecosystem services for human well-being. In this context, using suitable soil plant indicators allows us evaluate the efficiency of in sustaining functionality. Effective should be sensitive changes representative ecological processes. Many studies focus on selection or indicators. The prior investigations considered soil–plant interaction related complex heterarchical bidirectional effects involving strategy biota. choice use system could innovative better assess following: (1) ability support healthy plants their improve air quality; (2) effect processes, particular nutrient cycles. This review investigates suitability cycles, e.g., stoichiometry, enzyme activity nitrogen stable isotopes, as valuable tools planning evaluating effectiveness interventions.

Language: Английский

Citations

0
Co-occurrence network and predicted functions of bacterial community in soil from Brazilian Cerrado under distinct types of vegetation cover DOI
Sandra Mara Barbosa Rocha, Arthur Prudêncio de Araújo Pereira, Vânia Maria Maciel Melo

et al.

Community Ecology, Journal Year: 2025, Volume and Issue: unknown

Published: March 22, 2025

Language: Английский

Citations

0
Microbial keystone taxa and network complexity, rather than diversity, sustain soil multifunctionality along an elevational gradient in a subtropical karst mountain DOI
Weixue Luo, Peng Wang, Jinchun Liu

et al.

CATENA, Journal Year: 2025, Volume and Issue: 256, P. 109115 - 109115

Published: May 3, 2025

Language: Английский

Citations

0
Microbial dynamics and agroforestry impact on soil ecosystem multifunctionality following forest conversion to macadamia-based systems DOI

Fandi Xu,

Zhihong Guo, Yuchun Yang

et al.

Applied Soil Ecology, Journal Year: 2025, Volume and Issue: 206, P. 105869 - 105869

Published: Jan. 8, 2025

Language: Английский

Citations

0