bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: Dec. 20, 2023
Abstract
Virotherapy
treatment
is
a
new
and
promising
target
therapy
that
selectively
attacks
cancer
cells
without
harming
normal
cells.
Mathematical
models
of
oncolytic
viruses
have
shown
predator-prey
like
oscillatory
patterns
as
result
an
underlying
Hopf
bifurcation.
In
spatial
context,
these
oscillations
can
lead
to
different
spatio-temporal
phenomena
such
hollow-ring
patterns,
dispersed
patterns.
this
paper
we
continue
the
systematic
analysis
discuss
their
relevance
in
clinical
context.
We
consider
bifurcation
spatially
explicit
reaction-diffusion
model
find
above
mentioned
virus
infection
The
desired
pattern
for
tumor
eradication
hollow
ring
exact
conditions
its
occurrence.
Moreover,
derive
minimal
speed
travelling
invasion
waves
virus.
Our
numerical
simulations
2-D
reveal
complex
interactions
phenomenon
periodic
peak
splitting.
An
effect
cannot
explain
with
our
current
methods.
Bulletin of Mathematical Biology,
Journal Year:
2019,
Volume and Issue:
81(10), P. 3722 - 3731
Published: July 23, 2019
The
number
of
publications
on
mathematical
modeling
cancer
is
growing
at
an
exponential
rate,
according
to
PubMed
records,
provided
by
the
US
National
Library
Medicine
and
Institutes
Health.
Seminal
papers
have
initiated
promoted
helped
define
field
oncology
(Norton
Simon
in
J
Natl
Cancer
Inst
58:1735–1741,
1977;
Norton
Can
Res
48:7067–7071,
1988;
Hahnfeldt
et
al.
59:4770–4775,
1999;
Anderson
Comput
Math
Methods
Med
2:129–154,
2000.
https://doi.org/10.1080/10273660008833042
;
Michor
Nature
435:1267–1270,
2005.
https://doi.org/10.1038/nature03669
Cell
127:905–915,
2006.
https://doi.org/10.1016/j.cell.2006.09.042
Benzekry
PLoS
Biol
10:e1003800,
2014.
https://doi.org/10.1371/journal.pcbi.1003800
).
Following
introduction
undergraduate
graduate
programs
biology,
we
begun
see
curricula
developing
with
specific
exclusive
focus
oncology.
In
2018,
218
articles
were
published
various
journals,
including
not
only
traditional
journals
like
Bulletin
Mathematical
Biology
Journal
Theoretical
Biology,
but
also
renowned
science,
tremendous
impact
(Cell,
Research,
Clinical
Discovery,
Scientific
Reports,
PNAS,
Communications,
eLife,
etc).
This
shows
breadth
models
that
are
being
developed
for
multiple
purposes.
While
some
phenomenological
nature
following
a
bottom-up
approach,
other
more
top-down
data-driven.
Here,
discuss
emerging
trend
predict
novel,
optimal,
sometimes
even
patient-specific
treatments,
propose
convention
when
use
model
novel
treatments
and,
probably
importantly,
to.
Processes,
Journal Year:
2019,
Volume and Issue:
7(1), P. 37 - 37
Published: Jan. 13, 2019
Multiscale
systems
biology
and
pharmacology
are
powerful
methodologies
that
playing
increasingly
important
roles
in
understanding
the
fundamental
mechanisms
of
biological
phenomena
clinical
applications.
In
this
review,
we
summarize
state
art
applications
agent-based
models
(ABM)
hybrid
modeling
to
tumor
immune
microenvironment
cancer
response,
including
immunotherapy.
Heterogeneity
is
a
hallmark
cancer;
heterogeneity
at
molecular,
cellular,
tissue
scales
major
determinant
metastasis,
drug
resistance,
low
response
rate
molecular
targeted
therapies
immunotherapies.
Agent-based
an
effective
methodology
obtain
understand
quantitative
characteristics
these
processes
propose
solutions
aimed
overcoming
current
obstacles
treatment.
We
review
focusing
on
intra-tumor
heterogeneity,
particularly
interactions
between
cells
stromal
cells,
role
tumor-associated
vasculature
immune-related
mechanobiology,
discuss
digital
pathology
parameterizing
validating
spatial
computational
potential
therapeutics.
Journal of Hematology & Oncology,
Journal Year:
2021,
Volume and Issue:
14(1)
Published: April 16, 2021
Bispecific
T
cell
engagers
(BiTEs)
are
an
innovative
class
of
immunotherapeutics
that
redirect
cells
to
tumor
surface
antigens.
While
efficacious
against
certain
hematological
malignancies,
limited
bioavailability
and
severe
toxicities
have
so
far
hampered
broader
clinical
application,
especially
solid
tumors.
Another
emerging
cancer
immunotherapy
oncolytic
viruses
(OVs)
which
selectively
infect
replicate
in
malignant
cells,
thereby
mediating
vaccination
effects.
These
oncotropic
can
serve
as
vectors
for
tumor-targeted
immunomodulation
synergize
with
other
immunotherapies.
In
this
article,
we
discuss
the
use
OVs
overcome
challenges
BiTE
therapy.
We
review
current
state
field,
covering
published
preclinical
studies
well
ongoing
investigations.
systematically
introduce
OV-BiTE
vector
design
characteristics
evidence
immune-stimulating
anti-tumor
Moreover,
address
additional
combination
regimens,
including
CAR
immune
checkpoint
inhibitors,
further
strategies
modulate
microenvironment
using
OV-BiTEs.
The
inherent
complexity
these
novel
therapeutics
highlights
importance
translational
research
correlative
early-phase
trials.
More
broadly,
OV-BiTEs
a
blueprint
diverse
OV-based
The FASEB Journal,
Journal Year:
2018,
Volume and Issue:
32(4), P. 1733 - 1740
Published: March 29, 2018
Gene
therapy
is
emerging
as
a
viable
option
for
clinical
of
monogenic
disorders
and
other
genetically
defined
diseases,
with
approved
gene
therapies
available
in
Europe
newly
the
United
States.
In
past
10
years,
has
moved
from
distant
possibility,
even
minds
much
scientific
community,
to
being
widely
realized
valuable
therapeutic
tool
wide-ranging
potential.
The
U.S.
Food
Drug
Administration
recently
Luxturna
(Spark
Therapeutics
Inc,
Philadelphia,
PA,
USA),
recombinant
adeno-associated
virus
(rAAV)
2
one
type
Leber
congenital
amaurosis
(1,
2).
European
Medicines
Agency
(EMA)
3
viral
vector
products:
Glybera
(UniQure,
Amsterdam,
Netherlands),
an
rAAV
lipoprotein
lipase
deficiency;
Strimvelis
(Glaxo
Smith-Kline,
Brentford,
Kingdom),
ex
vivo
gammaretrovirus-based
patients
adenosine
deaminase-deficient
severe
combined
immune
deficiency
(ADA-SCID);
Kymriah
(Novartis,
Basel,
Switzerland),
lentivirus-based
engineer
autologous
chimeric
antigen-receptor
T
(CAR-T)
cells
targeting
CD19–positive
acute
lymphoblastic
leukemia.
These
examples
will
be
followed
by
approval
products
this
field
matures.
review
we
provide
overview
state
discussing
where
stands
respect
different
platforms
types
that
are
available.—
Gruntman,
A.
M.,
Flotte,
T.
R.
rapidly
evolving
therapy.
FASEB
J.
32,
1733–1740
(2018).
www.fasebj.org
Physics in Medicine and Biology,
Journal Year:
2020,
Volume and Issue:
65(24), P. 24TR01 - 24TR01
Published: Oct. 22, 2020
Modern
cancer
immunotherapy
has
revolutionised
oncology
and
carries
the
potential
to
radically
change
approach
treatment.
However,
numerous
questions
remain
be
answered
understand
response
better
further
improve
benefit
for
future
patients.
Computational
models
are
promising
tools
that
can
contribute
accelerated
research
by
providing
new
clues
hypotheses
could
tested
in
trials,
based
on
preceding
simulations
addition
empirical
rationale.
In
this
topical
review,
we
briefly
summarise
history
of
immunotherapy,
including
computational
modelling
traditional
comprehensively
review
modern
such
as
immune
checkpoint
inhibitors
(as
monotherapy
combination
treatment),
co-stimulatory
agonistic
antibodies,
bispecific
chimeric
antigen
receptor
T
cells.
The
approaches
classified
into
one
following
categories:
data-driven
top-down
vs
mechanistic
bottom-up,
simplistic
detailed,
continuous
discrete,
hybrid.
Several
common
summarised,
pharmacokinetic/pharmacodynamic
models,
Lotka-Volterra
evolutionary
game
theory
quantitative
systems
pharmacology
spatio-temporal
agent-based
logic-based
models.
Pros
cons
each
critically
discussed,
particularly
with
focus
successful
translation
immuno-oncology
routine
clinical
practice.
Specific
attention
is
paid
calibration
validation
model,
which
a
necessary
prerequisite
any
at
same
time,
main
obstacles.
Lastly,
provide
guidelines
suggestions
development
field.
Bioengineering,
Journal Year:
2024,
Volume and Issue:
11(3), P. 264 - 264
Published: March 8, 2024
Currently,
immunotherapy
is
one
of
the
most
effective
treatment
strategies
for
cancer.
However,
efficacy
any
specific
anti-tumor
can
vary
based
on
dynamic
characteristics
immune
cells,
such
as
their
rate
migration
and
cell-to-cell
interactions.
Therefore,
understanding
dynamics
among
cells
involved
in
response
inform
optimization
improvement
existing
strategies.
In
vivo
imaging
technologies
use
optical
microscopy
techniques
to
visualize
movement
behavior
vivo,
including
response,
thereby
showing
great
potential
application
field
cancer
immunotherapy.
this
review,
we
briefly
introduce
technical
aspects
required
imaging,
fluorescent
protein
labeling,
construction
transgenic
mice,
various
window
chamber
models.
Then,
discuss
elucidation
new
phenomena
mechanisms
relating
tumor
that
has
been
made
possible
by
technology.
Specifically,
supported
characterization
T
during
checkpoint
inhibitor
therapy
kinetic
analysis
dendritic
cell
vaccine
therapy.
Finally,
provide
a
perspective
challenges
future
research
directions
technology
Computational and Mathematical Methods in Medicine,
Journal Year:
2018,
Volume and Issue:
2018, P. 1 - 14
Published: Oct. 30, 2018
Mathematical
models
of
biological
systems
must
strike
a
balance
between
being
sufficiently
complex
to
capture
important
features,
while
simple
enough
that
they
remain
tractable
through
analysis
or
simulation.
In
this
work,
we
rigorously
explore
how
these
competing
interests
when
modeling
murine
melanoma
treatment
with
oncolytic
viruses
and
dendritic
cell
injections.
Previously,
developed
system
six
ordinary
differential
equations
containing
fourteen
parameters
well
describes
experimental
data
on
the
efficacy
treatments.
Here,
whether
previously
model
is
minimal
needed
accurately
describe
data.
Using
variety
techniques,
including
sensitivity
analyses
parameter
sloppiness
analysis,
find
our
can
be
reduced
by
one
variable
three
still
give
excellent
fits
We
also
argue
not
too
dynamics
data,
original
make
similar
predictions
about
robustness
protocols
considered
in
experiments.
Reducing
its
form
allows
us
increase
tractability
face
parametric
uncertainty.
Mathematical Medicine and Biology A Journal of the IMA,
Journal Year:
2019,
Volume and Issue:
unknown
Published: March 27, 2019
We
develop
and
analyse
a
mathematical
model
of
tumour-immune
interaction
that
explicitly
incorporates
heterogeneity
in
tumour
cell
cycle
duration
by
using
distributed
delay
differential
equation.
derive
necessary
sufficient
condition
for
local
stability
the
cancer-free
equilibrium
which
amount
completely
characterizes
disease
progression.
Consistent
with
immunoediting
hypothesis,
we
show
decreasing
leads
to
expansion.
Finally,
simulating
model,
strength
determines
long-term
success
or
failure
viral
therapy.