Regulation of Metabolites by Nutrients in Plants DOI Open Access
Akash Tariq,

Fanjiang Zeng,

Corina Graciano

и другие.

Опубликована: Март 3, 2023

Chapter 1 Regulation of Metabolites by Nutrients in Plants Akash Tariq, Tariq Xinjiang Key Laboratory Desert Plant Roots Ecology and Vegetation Restoration, Institute Geography, Chinese Academy Sciences, Urumqi, China State Oasis Ecology, Cele National Station Observation Research for Desert-Grassland Ecosystems, Cele, University Beijing, ChinaSearch more papers this authorFanjiang Zeng, Fanjiang Zeng authorCorina Graciano, Corina Graciano Instituto de Fisiología Vegetal, Consejo Nacional Investigaciones Científicas y Técnicas, Universidad La Plata, Buenos Aires, ArgentinaSearch authorAbd Ullah, Abd Ullah authorSehrish Sadia, Sehrish Sadia Department Biological Veterinary Animal Lahore, PakistanSearch authorZeeshan Ahmed, Zeeshan Ahmed authorGhulam Murtaza, Ghulam Murtaza Faculty Environmental Science Engineering, Kunming Technology, Kunming, PR authorKhasan Ismoilov, Khasan Ismoilov CAS Biogeography Bioresource Arid Land, authorZhihao Zhang, Zhihao Zhang author Book Editor(s):Vijay Pratap Singh, Vijay Singh Allahabad, Prayagraj, IndiaSearch authorManzer H. Siddiqui, Manzer Siddiqui King Saud University, Riyadh, Saudi ArabiaSearch First published: 03 March 2023 https://doi.org/10.1002/9781119803041.ch1Citations: 2 AboutPDFPDF ToolsRequest permissionExport citationAdd to favoritesTrack citation ShareShareShare a linkShare onEmailFacebookTwitterLinkedInRedditWechat Summary Mineral nutrition plays vital role plant growth metabolism. To date, 17 essential nutrients have been identified that are direly needed growth. Nitrogen (N), phosphorus (P), potassium (K) among the most important macronutrients, whereas micronutrients include chloride (Cl), copper (Cu), manganese (Mn), iron (Fe), zinc (Zn), cobalt (Co), molybdenum (Mo), nickel (Ni). Each mineral carries equal importance, deficiency any them can affect disrupt life cycle. treasure troves bioactive metabolites essentially regulate nearly all fundamental processes like growth, reproduction, environmental responses. These divided into two major categories, i.e. primary (PMs) secondary (SMs) according their functions. There is strong linkage between nutrients. Biosynthesis involves various metabolic pathways such as absorption, carbon assimilation, photosynthesis, protoplast formation, respiration, transpiration, translocation, storage. regulated available different forms soil solution. N necessary biosynthesis PMs (i.e. amino acids, chlorophyll, nucleic lipids, proteins, enzymes) SMs flavonoids phenolic compounds). P sugar phosphates, phospholipids, DNA, RNA, nucleotide synthesis well actively involved energy K mediates sugars, organic antioxidants also many regulatory roles. Similarly, (S, Ca, Mg, Fe, Cu, Mn, B, Cl) wide array flavonoids, phytohormones, vitamins, antioxidants, glucosinolates, cofactors crucial development. Availability composition profound effect on type amount produced. So there lies an increased interest unraveling roles metabolites. Therefore, chapter specifically aims improve our understanding regarding References Aghajanzadeh , T. ( 2015 ). Sulfur metabolism, glucosinolates fungal resistance Brassica . Groningen. Ahanger M.A. Agarwal R.M. 2017a Salinity stress induced alterations antioxidant metabolism nitrogen assimilation wheat Triticum aestivum L.) influenced supplementation Physiol. Biochem. 115 : 449 – 460 2017b Potassium improves alleviates inhibition under water osmotic Protoplasma 254 4 ): 1471 1486 Tyagi S.R. Wani M.R. Ahmad P. 2014 Drought tolerance: osmolytes, regulators, In: Physiological Mechanisms Adaptation Strategies Under Changing Environment (ed. M. ), 25 55 New York Springer Tomar N.S. Shrivastava induces positive changes system oat Avena sativa L cultivar Kent) J. Interact. 10 211 223 Amtmann A. Armengaud 2009 Effects N, P, S metabolism: new knowledge gained from multi-level analysis Curr. Opin. Biol. 12 275 283 Blatt macronutrient transport Phytol. 181 35 52 Sulpice R. Miller A.J. et al. Multi-level provides insights glycolysis Arabidopsis roots 150 772 785 Asgher Khan N.A. M.I.R. Ethylene production associated with alleviation cadmium- oxidative sulfur mustard types differing ethylene sensitivity Ecotox. Environ. Safety 106 54 61 Ashihara Stupavska S. 1984 Comparison activities properties pyrophosphate- adenosine triphosphate-dependent phosphofructokinase black gram Phaseolus mungo ) seeds 116 241 252 Ashley M.K. Grant Grabov 2006 responses deficiencies: proteins Exp. Bot. 57 425 436 Avigad G. Bohrer P.J. 6-Phosphofructo-2-kinase D-fructose-2,6-bisphosphatase mung bean seedlings Biochim. Biophys. Acta 798 3 317 324 Balasundram N. Sundram K. Samman Phenolic compounds plants agri-industrial by-products: activity, occurrence, potential uses Food Chem. 99 191 203 Balke N.E. Hodges T.K. 1975 Plasma membrane triphosphatase roots: activation Mg 2+ ATP 83 86 Ballizany W.L. Hofmann R.W. Jahufer M.Z.Z. Barrett B.A. 2012 Genotype×environment flavonoid accumulation morphology white clover contrasting field conditions Field Crop Res. 128 156 166 Bankaji I. Caçador Sleimi biochemical Suaeda fruticosa cadmium stresses: nutrient uptake, enzymes, phytochelatin, glutathione levels Sci. Pollut. 22 13058 13069 Baranauskiene Venskutonis P.R. Viskelis Dambrauskiene E. 2003 Influence fertilizers yield thyme Thymus vulgaris Agric. 51 7751 7758 Bárcena C. Luca 2019 Shade cloths polyethylene covers opposite effects tip burn development greenhouse grown lettuce Hortic. 249 93 Bove J.M. Whatley F.R. Arnon D.I. 1963 Chloride requirement oxygen evolution photosynthesis Zashch Met. 18b 683 688 Camacho-Cristóbal J.J. González-Fontes 1999 Boron causes drastic decrease nitrate content reductase increases carbohydrates leaves tobacco Planta 209 528 536 Anzellotti D. 2002 Changes during short-term boron 40 997 1002 Lunar L. Lafont F. 2004 chlorogenic acid caffeoyl polyamine conjugates 161 7 879 881 Castaneda Perez L.M. 1996 Calcium ions promote response citrus lemon against elicitors or wounding Phytochemistry 42 595 598 Chao Bofu Weiqian 2008 Influences calcium cerium spinach Trace Elem. 121 266 Yun Cerium influence antioxidative defense Soil 323 285 294 Chen W. He Z.L. Yang X.E. 2010 Chlorine higher plants: progress perspectives Nutr. 33 943 952 Clarkson D.T. Hanson J.B. 1980 The Annu. Rev. 31 239 232 Coruzzi Bush D.R. 2001 metabolite signaling 125 64 Davenport Glutamate receptors Ann. 90 549 557 Demidchik V. Maathuis F.J.M. 2007 nonselective cation channels salt 175 387 404 El-Beltagi H.S. Mohamed H.I. 2013 Alleviation toxicity Pisum sativum NotBot. Horti. Agrobot. Cluj-Napoca 41 157 168 Elkelish A.A. Alnusaire T.S. Soliman M.H. availability regulates system, physio-biochemical salinity mediated damage soybean Appl. Qual. 92 258 Erel Yermiyahu U. Ben-Gal Modification non-stomatal limitation photo-protection due Na olive trees 177 Evans H.J. Sorger G.J. 1966 Role elements emphasis univalent cations 47 76 Fatma Masood Excess through 107 63 Per 2016 Nitric oxide inhibited photosynthetic performance interacting Front. 521 Fixen Paul 1993 Adv. Agron. 50 Flores Botella Martínez Cedra 2000 Ionic activity tomato 552 Flowers T.J. 1988 osmoticum B Advances Nutrition P.B. Tinker Läuchli 78 York, USA Praeger Geilfus C.M. 2018 Review significance chlorine crop quality 270 114 122 Hajiboland Farhanghi Remobilization boron, capacity boron-deficient turnip rapa 56 427 437 Han L.S. Jiang H.X. decreases starch hexoses 165 13 1331 1341 Tang CO photosystem II photochemistry, carbohydrate 176 143 153 Hansch Ralf functions (Cu, Zn, Ni, Mo, 259 Haynes R.J. Ion exchange ionic interactions within root apoplasm: ion 46 75 Hemalatha Venkatesan 2011 Impact certain enzymes parameters tea Asian 6 384 394 Hernandez Valdes-Lopez O. Ramirez Global transcript profiles symbiotic fixation stressed common 151 1221 1238 Hochmal A.K. Schulze Trompelt Hippler Calcium-dependent regulation 1847 993 1003 Hofner 1970 Iron Blutungssaft Helianthus annuus Plant. 23 673 677 Honsel Kojima Haas early poplar: gene expression, metabolites, hormones 1873 1893 Howeler R.H. 1973 ringing disease rice relation physicochemical flooded Soc. Am. Proc. 37 898 903 Hurry Strand Furbank Stitt inorganic phosphate freezing tolerance acclimatization low temperature revealed pho mutants thaliana 24 383 396 Jin S.H. Huang J.Q. Li X.Q. supply limitations mesophyll diffusion conductance Carya cathayensis Tree 1142 1151 Juric Stracenski K.S. Król-Kilińska Ż. 2020 enhancement Lactuca encapsulated agents Rep. Nazir Selenium formation alleviate cadmium-induced improving proline 173 9 18 Kováčik Klejdus B. Induction physiological chamomile 142 334 341 Štork Hedbavny Nitrate reduces 59 5139 5149 Kuper Llamas Hecht Structure molybdopterin-bound Cnx1G domain links Nature 430 803 806 Kutz Muller Hennig A nitrilase sulphur-starving 30 95 Lacombe Becker Hedrich identity glutamate 292 1487 Lehman Rice E.L. 1972 deficiencies nitrogen, potassium, acids scopolin sunflower Midl. Nat. 87 71 80 Leigh R.A. Wyn Jones R.G. hypothesis relating critical concentrations distribution plant-cell 97 Leite Mather J.A. approach octopuses' body pattern analysis: framework taxonomy behavioral studies Malacol. Bull. Lubbe Verpoorte Cultivation medicinal aromatic specialty industrial materials Ind. Crop. Prod. 34 801 Lunde Zygadlo Simonsen H.T. starvation rice: protective 134 508 F.J. macronutrients 250 Diatloff Roles 953 21 del Mar Rubio-Wilhelmi Sanchez-Rodriguez Rosales 2012a Ammonium PSARK∷ IPT transgenic 169 162 Leyva 2012b Response nitrogen-rich 231 237 Marschner 1995 Higher London Academic Press Marschner's 3e London, UK Mazid T.A. Mohammad mechanisms Med. Monteiro H.P. Winterbourn C.C. superoxide dependant transfer ferritin transferring lactoferrin 256 923 928 Morcuende Bari Gibon Y. Genome-wide reprogramming networks Cell 85 112 Mun Kim Y.X. Suh D.H. Metabolomic Perilla frutescens leaves, edible-medicinal herb, acclimatize magnesium oversupply PLoS One 15 e0236813 Nakabayashi Yonekura-Sakakibara Urano Enhancement drought over 77 367 379 Nguyen P.M. Kwee E.M. Niemeyer E.D. rate alters concentration basil Ocimum basilicum 123 1235 1241 Nikiforova V.J. Kopka Tolstikov 2005 Systems rebalancing deprivation, metabolome 138 304 318 Olle Bender Causes control disorders vegetables: review Biotechnol. 84 577 584 Ossipov Haukioja Ossipova phenolic-related factors determinants suitability mountain birch herbivorous insect Syst. Ecol. 29 240 Ottow J.C.G. Benckiser Santiago Watanabe 1982 wetland Oryza multiple nutritional Nutr 454 Pant B.D. Erban Identification status-dependent abundance Arabidopsis, transcription factor PHR regulator 38 172 187 M.J. Driscoll S.P. 1997 Sugar repression photosynthesis: defciency source: sink imbalance 20 110 Pilon Abdel-Ghany S.E. Cohu Copper cofactor delivery cells 263 Rai Saito Yamazaki 2017 Integrated omics specialized 764 787 Rodriguez F.I. Esch Hall A.E. receptor ETR1 996 998 Franco-Navarro J.D. Peinado-Torrubia utilization NUE 11 442 Ruuhola Leppänen Lehto 2011a Retranslocation senescence Betula pendula Roth 344 227 Keinänen Keski-Saari 2011b affects silver 1251 1261 Scheible W.R. Czechowski protein synthesis, cellular processes, infrastructure 136 2483 2499 Secco Jabnoune Walker Spatio-temporal profiling shoots recovery 4285 4304 Sharma G.L. R.P. aspects chickpea Cicer arietinum Mol. Shireen Nawaz Boron: approaches enhance its sustainable agriculture Int. 19 1856 Shiwakoti Shannon D.A. Wood C.W. Nitrogen, phosphorus, biomass American skullcap Scutellaria lateriflora 39 1240 1249 Siedow J.N. 1991 lipoxygenase: structure function 145 188 da Silva D.L. Mello Tenesaca 2021 Silicon attenuates increasing ascorbic content, cabbage 1770 Soetan K.O. Olaiya C.O. Oyewole O.E. importance humans, domestic animals Afr. 5 200 222 Ford R.E. 1965 immuno-electrophoretic behavior pyruvic kinase Natl. Acad. 1614 1621 Strissel Halbwirth Hoyer Growth-promoting young apple Malus domestica Borkh.) 685 Takahashi Kopriva Giordano organisms: molecular regulations transporters assimilatory 62 184 Tiwari Bhatt R.K. 1998 Photosynthesis, stomatal related characteristics, normal Indian 314 316 Troufflard Mullen Larson T.R. oxylipins BMC Wallace Mueller R.T. uptake 247 White plants. Biochi Biomembr. 146 171 189 Pollard 1983 Proteins, Inorganic Luchli R.L. Bieleski 562 Xu Magen Tarchitzky Kafkafi 68 Yruela acquisition, Funct. 36 409 Yuan Liu Signaling components Integr. 849 859 Quan X. Root leaf reveals adaptive strategies barley Zhong Ma G.R. potato J Zhejiang Agric 88 Zorb Senbayram Peiter agriculture? Status 656 669 Citing Literature Ionomics: Sensing, Signaling, ReferencesRelatedInformation

Язык: Английский

MapMan4: A Refined Protein Classification and Annotation Framework Applicable to Multi-Omics Data Analysis DOI Creative Commons

Rainer Schwacke,

Gabriel Yaxal Ponce‐Soto, Kirsten Krause

и другие.

Molecular Plant, Год журнала: 2019, Номер 12(6), С. 879 - 892

Опубликована: Янв. 9, 2019

Язык: Английский

Процитировано

410

The Structure and Function of Major Plant Metabolite Modifications DOI Creative Commons
Shouchuang Wang, Saleh Alseekh, Alisdair R. Fernie

и другие.

Molecular Plant, Год журнала: 2019, Номер 12(7), С. 899 - 919

Опубликована: Июнь 11, 2019

Язык: Английский

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334

Exploring the Diversity of Plant Metabolism DOI
Chuanying Fang, Alisdair R. Fernie, Jie Luo

и другие.

Trends in Plant Science, Год журнала: 2018, Номер 24(1), С. 83 - 98

Опубликована: Окт. 5, 2018

Язык: Английский

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262

Metabolomics in the Context of Plant Natural Products Research: From Sample Preparation to Metabolite Analysis DOI Creative Commons
Mohamed A. Salem, Leonardo Perez de Souza, Ahmed Serag

и другие.

Metabolites, Год журнала: 2020, Номер 10(1), С. 37 - 37

Опубликована: Янв. 15, 2020

Plant-derived natural products have long been considered a valuable source of lead compounds for drug development. Natural extracts are usually composed hundreds to thousands metabolites, whereby the bioactivity can be represented by synergism between several metabolites. However, isolating every single compound from extract is not always possible due complex chemistry and presence most secondary metabolites at very low levels. Metabolomics has emerged in recent years as an indispensable tool analysis crude extracts, leading paradigm shift research. Analytical methods such mass spectrometry (MS) nuclear magnetic resonance (NMR) used comprehensively annotate constituents plant screening, discovery well quality control purposes those required phytomedicine. In this review, current advancements sample preparation, measurements, data presented alongside few case studies successful applications these processes product discovery.

Язык: Английский

Процитировано

233

Metabolomics 20 years on: what have we learned and what hurdles remain? DOI Open Access
Saleh Alseekh, Alisdair R. Fernie

The Plant Journal, Год журнала: 2018, Номер 94(6), С. 933 - 942

Опубликована: Май 7, 2018

The term metabolome was coined in 1998, by analogy to genome, transcriptome and proteome. first research papers using the terms metabolomics, metabonomics, metabolic profiling or metabolite were published shortly thereafter. In this short review we reflect on major achievements brought about use of these approaches, document knowledge technology gaps that are currently constraining its further development. Finally, detail why think time is ripe refocus our efforts understanding function.

Язык: Английский

Процитировано

210

Transcriptional Regulation of Carotenoid Biosynthesis in Plants: So Many Regulators, So Little Consensus DOI Creative Commons
Lauren E. Stanley, Yao‐Wu Yuan

Frontiers in Plant Science, Год журнала: 2019, Номер 10

Опубликована: Авг. 9, 2019

In plants, the carotenoid biosynthesis pathway (CBP) is essential for production of photosynthetic and protective pigments, plant hormones, visual/olfactory attractants animal pollinators seed dispersers. The regulation at transcriptional level vitally important all these functions, has been subject intensive research. Many putative regulators, both direct indirect, have identified through conventional mutant analysis, transcriptome profiling, yeast-one-hybrid screening, candidate gene approaches. Despite this progress, our understanding remains fragmented incomplete. Frequently, a stimulus or regulator known, but mechanism by which it affects transcription not elucidated. other cases, mechanisms proposed (such as binding CBP promoter factor), function was tested only in vitro heterologous systems, making unclear whether proteins actually play role their endogenous environments. Even cases where relatively well understood, regulators are often studied isolation, either single species outside context known regulators. This presents conundrum: Why so many little consensus? Here we summarize current knowledge on CBP, lay out challenges contributing to conundrum, identify remaining gaps, suggest future research directions address gaps.

Язык: Английский

Процитировано

208

The style and substance of plant flavonoid decoration; towards defining both structure and function DOI Creative Commons
Saleh Alseekh, Leonardo Perez de Souza, Maria Benina

и другие.

Phytochemistry, Год журнала: 2020, Номер 174, С. 112347 - 112347

Опубликована: Апрель 25, 2020

Over 8000 different flavonoids have been described and a considerable number of new flavonoid structures are being elucidated every year. The advent metabolomics alongside the development phytochemical genetics – wherein genetic basis underlying regulation levels plant metabolites is determined has provided massive boost to such efforts. That said our understanding individual function(s) vast majority that constitute this important class phytochemicals remains unknown. Here we review what known concerning major decorative modifications in plants, namely hydroxylation, glycosylation, methylation acylation. Our focus with regard planta function these modified compounds, however, also highlight demonstrated bioactive roles which they possess. We additionally performed comprehensive survey listed KNApSAcK database order assess frequency occurrence each type modification. conclude whilst research carried out regarding biological most studies date merely information on compound or sub-classes thereof as whole too little currently specific role metabolites. We, therefore, finally suggest framework based available tools by relative importance compounds can be assessed under various conditions fill knowledge-gap.

Язык: Английский

Процитировано

201

Jasmonates are signals in the biosynthesis of secondary metabolites — Pathways, transcription factors and applied aspects — A brief review DOI
Claus Wasternack, Miroslav Strnad

New Biotechnology, Год журнала: 2017, Номер 48, С. 1 - 11

Опубликована: Окт. 12, 2017

Язык: Английский

Процитировано

196

Flavonoid mediated selective cross-talk between plants and beneficial soil microbiome DOI Open Access
Sagar Bag, Anupam Mondal,

Anusha Majumder

и другие.

Phytochemistry Reviews, Год журнала: 2022, Номер 21(5), С. 1739 - 1760

Опубликована: Фев. 21, 2022

Язык: Английский

Процитировано

76

Microbial regulation of plant secondary metabolites: Impact, mechanisms and prospects DOI

Jiayan Lv,

Shuangyu Yang,

Wei Zhou

и другие.

Microbiological Research, Год журнала: 2024, Номер 283, С. 127688 - 127688

Опубликована: Март 8, 2024

Язык: Английский

Процитировано

27