Plant base editing and prime editing: The current status and future perspectives DOI Open Access
Jingying Li, Chen Zhang, Yubing He

et al.

Journal of Integrative Plant Biology, Journal Year: 2022, Volume and Issue: 65(2), P. 444 - 467

Published: Dec. 7, 2022

Precise replacement of an allele with elite controlling important agronomic trait in a predefined manner by gene editing technologies is highly desirable crop improvement. Base and prime are two newly developed precision systems which can introduce the substitution single base install desired short indels to target loci absence double-strand breaks donor repair templates, respectively. Since their discoveries, various strategies have been attempted optimize both editor (BE) (PE) order improve precise efficacy, specificity, expand targeting scopes. Here, we summarize latest development BEs PEs, as well applications plants. Based on these progresses, recommend appropriate PEs for basic plant research Moreover, propose perspectives further optimization editors. We envision that will become routine customized tools biological improvement near future.

Language: Английский

Safety and feasibility of CRISPR-edited T cells in patients with refractory non-small-cell lung cancer DOI
You Lü, Jianxin Xue, Tao Deng

et al.

Nature Medicine, Journal Year: 2020, Volume and Issue: 26(5), P. 732 - 740

Published: April 27, 2020

Language: Английский

Citations

433

Tools and Techniques for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2)/COVID-19 Detection DOI
Seyed Hamid Safiabadi Tali, Jason J. LeBlanc,

Zubi Sadiq

et al.

Clinical Microbiology Reviews, Journal Year: 2021, Volume and Issue: 34(3)

Published: May 11, 2021

The coronavirus disease 2019 (COVID-19) pandemic, caused by severe acute respiratory 2 (SARS-CoV-2), has led to millions of confirmed cases and deaths worldwide. Efficient diagnostic tools are in high demand, as rapid large-scale testing plays a pivotal role patient management decelerating spread.

Language: Английский

Citations

350

CRISPR/Cas9 therapeutics: progress and prospects DOI Creative Commons
Tianxiang Li, Yanyan Yang, Hongzhao Qi

et al.

Signal Transduction and Targeted Therapy, Journal Year: 2023, Volume and Issue: 8(1)

Published: Jan. 16, 2023

Abstract Clustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR-associated protein 9 (Cas9) gene-editing technology is the ideal tool of future for treating diseases by permanently correcting deleterious base mutations or disrupting disease-causing genes with great precision and efficiency. A variety efficient Cas9 variants derivatives have been developed to cope complex genomic changes that occur during diseases. However, strategies effectively deliver CRISPR system diseased cells in vivo are currently lacking, nonviral vectors target recognition functions may be focus research. Pathological physiological resulting from disease onset expected serve as identifying factors targeted delivery targets gene editing. Diseases both varied complex, choice appropriate methods different important. Meanwhile, there still many potential challenges identified when targeting CRISPR/Cas9 treatment. This paper reviews current developments three aspects, namely, type, vector, characteristics. Additionally, this summarizes successful examples clinical trials finally describes possible problems associated applications.

Language: Английский

Citations

321

Mechanism and Applications of CRISPR/Cas-9-Mediated Genome Editing DOI Creative Commons
Misganaw Asmamaw Mengstie,

Belay Zawdie Wondimu

Biologics, Journal Year: 2021, Volume and Issue: Volume 15, P. 353 - 361

Published: Aug. 1, 2021

Abstract: Clustered regularly interspaced short palindromic repeat (CRISPR) and their associated protein (Cas-9) is the most effective, efficient, accurate method of genome editing tool in all living cells utilized many applied disciplines. Guide RNA (gRNA) CRISPR-associated proteins are two essential components CRISPR/Cas-9 system. The mechanism contains three steps, recognition, cleavage, repair. designed sgRNA recognizes target sequence gene interest through a complementary base pair. While Cas-9 nuclease makes double-stranded breaks at site 3 pair upstream to protospacer adjacent motif, then break repaired by either non-homologous end joining or homology-directed repair cellular mechanisms. genome-editing has wide number applications areas including medicine, agriculture, biotechnology. In it could help design new grains improve nutritional value. being investigated for cancers, HIV, therapy such as sickle cell disease, cystic fibrosis, Duchenne muscular dystrophy. technology also regulation specific genes advanced modification protein. However, immunogenicity, effective delivery systems, off-target effect, ethical issues have been major barriers extend clinical applications. Although becomes era molecular biology countless roles ranging from basic researches applications, there still challenges rub practical various improvements needed overcome obstacles. Keywords: CRISPR, Cas-9, sgRNA, gene-editing, mechanism,

Language: Английский

Citations

285

CRISPR/Cas Systems in Genome Editing: Methodologies and Tools for sgRNA Design, Off‐Target Evaluation, and Strategies to Mitigate Off‐Target Effects DOI
Hakim Manghwar, Bo Li, Xiao Ding

et al.

Advanced Science, Journal Year: 2020, Volume and Issue: 7(6)

Published: Feb. 6, 2020

Abstract Life sciences have been revolutionized by genome editing (GE) tools, including zinc finger nucleases, transcription activator‐Like effector and CRISPR (clustered regulatory interspaced short palindromic repeats)/Cas (CRISPR‐associated) systems, which make the targeted modification of genomic DNA all organisms possible. CRISPR/Cas systems are being widely used because their accuracy, efficiency, cost‐effectiveness. Various classes developed, but extensive use may be hindered off‐target effects. Efforts made to reduce effects CRISPR/Cas9 generating various with high fidelity accuracy. Several approaches applied detect evaluate Here, current GE generated technology, types effects, mechanisms major concerns, outcomes in plants animals summarized. The methods tools for single‐guide RNA (sgRNA) design, evaluation prediction strategies increase on‐target efficiency mitigate impact on intended genome‐editing

Language: Английский

Citations

249

Genome editing with the CRISPR‐Cas system: an art, ethics and global regulatory perspective DOI Creative Commons
Debin Zhang, Amjad Hussain, Hakim Manghwar

et al.

Plant Biotechnology Journal, Journal Year: 2020, Volume and Issue: 18(8), P. 1651 - 1669

Published: April 9, 2020

Summary Over the last three decades, development of new genome editing techniques, such as ODM, TALENs, ZFNs and CRISPR‐Cas system, has led to significant progress in field plant animal breeding. The system is most versatile tool discovered history molecular biology because it can be used alter diverse genomes (e.g. from both plants animals) including human with unprecedented ease, accuracy high efficiency. recent scope have raised regulatory challenges around world due moral, ethical, safety technical concerns associated its applications pre‐clinical clinical research, biomedicine agriculture. Here, we review art, potential risks editing. We also highlight patent ethical issues this technology along frameworks established by various nations regulate CRISPR‐Cas‐modified organisms/products.

Language: Английский

Citations

155

Advances in CRISPR therapeutics DOI Open Access

Michael Chavez,

Xinyi Chen,

Paul B. Finn

et al.

Nature Reviews Nephrology, Journal Year: 2022, Volume and Issue: 19(1), P. 9 - 22

Published: Oct. 24, 2022

Language: Английский

Citations

114

Two Years into the COVID-19 Pandemic: Lessons Learned DOI Creative Commons
Severino Jefferson Ribeiro da Silva, Jéssica Catarine Frutuoso do Nascimento, Renata Pessôa Germano Mendes

et al.

ACS Infectious Diseases, Journal Year: 2022, Volume and Issue: 8(9), P. 1758 - 1814

Published: Aug. 8, 2022

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is a highly transmissible and virulent human-infecting that emerged in late December 2019 Wuhan, China, causing disease called (COVID-19), which has massively impacted global public health caused widespread disruption to daily life. The crisis by COVID-19 mobilized scientists authorities across the world rapidly improve our knowledge about this devastating disease, shedding light on its management control, spawned development of new countermeasures. Here we provide an overview state art gained last years virus COVID-19, including origin natural reservoir hosts, viral etiology, epidemiology, modes transmission, clinical manifestations, pathophysiology, diagnosis, treatment, prevention, emerging variants, vaccines, highlighting important differences from previously known pathogenic coronaviruses. We also discuss selected key discoveries each topic underline gaps for future investigations.

Language: Английский

Citations

112

Leaf transformation for efficient random integration and targeted genome modification in maize and sorghum DOI Creative Commons
Ning Wang, Larisa Ryan, Nagesh Sardesai

et al.

Nature Plants, Journal Year: 2023, Volume and Issue: unknown

Published: Feb. 9, 2023

Abstract Transformation in grass species has traditionally relied on immature embryos and therefore been limited to a few major Poaceae crops. Other transformation explants, including leaf tissue, have explored but with low success rates, which is one of the factors hindering broad application genome editing for crop improvement. Recently, using morphogenic genes Wuschel2 ( Wus2 ) Babyboom Bbm successfully used Cas9-mediated mutagenesis, complex applications, requiring large numbers regenerated plants be screened, remain elusive. Here we demonstrate that enhanced / expression substantially improves maize sorghum, allowing recovery gene dropouts targeted insertion. Moreover, maize-optimized construct, embryogenic callus plantlets were produced eight spanning four subfamilies, suggesting this may lead universal family-wide method across Poaceae.

Language: Английский

Citations

76

Comprehensive review of CRISPR-based gene editing: mechanisms, challenges, and applications in cancer therapy DOI Creative Commons
Mohammad Chehelgerdi, Matin Chehelgerdi, Milad Khorramian‐Ghahfarokhi

et al.

Molecular Cancer, Journal Year: 2024, Volume and Issue: 23(1)

Published: Jan. 9, 2024

Abstract The CRISPR system is a revolutionary genome editing tool that has the potential to revolutionize field of cancer research and therapy. ability precisely target edit specific genetic mutations drive growth spread tumors opened up new possibilities for development more effective personalized treatments. In this review, we will discuss different CRISPR-based strategies have been proposed therapy, including inactivating genes tumor growth, enhancing immune response cells, repairing cause cancer, delivering cancer-killing molecules directly cells. We also summarize current state preclinical studies clinical trials highlighting most promising results challenges still need be overcome. Safety delivery are important therapy become viable option. limitations overcome, such as off-target effects, safety, site. Finally, provide an overview opportunities in future directions development. change landscape research, review aims overcome realize potential.

Language: Английский

Citations

72