Fungal diversity notes 1512–1610: taxonomic and phylogenetic contributions on genera and species of fungal taxa

Fungal Diversity, Journal Year: 2022, Volume and Issue: 117(1), P. 1 - 272

Published: Nov. 1, 2022

Language: Английский

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Current trends, limitations and future research in the fungi?

Fungal Diversity, Journal Year: 2024, Volume and Issue: 125(1), P. 1 - 71

Published: March 20, 2024

Abstract The field of mycology has grown from an underappreciated subset botany, to a valuable, modern scientific discipline. As this study grown, there have been significant contributions science, technology, and industry, highlighting the value fungi in era. This paper looks at current research, along with existing limitations, suggests future areas where scientists can focus their efforts, mycology. We show how become important emerging diseases medical discuss trends potential drug novel compound discovery. explore phylogenomics, its potential, outcomes address question phylogenomics be applied fungal ecology. In addition, functional genomics studies are discussed importance unravelling intricate mechanisms underlying behaviour, interactions, adaptations, paving way for comprehensive understanding biology. look research building materials, they used as carbon sinks, biocircular economies. numbers always great interest often written about estimates varied greatly. Thus, we needs order obtain more reliable estimates. aspects machine learning (AI) it mycological research. Plant pathogens affecting food production systems on global scale, such, needed area, particularly disease detection. latest data High Throughput Sequencing if still gaining new knowledge same rate before. A review nanotechnology is provided addressed. Arbuscular Mycorrhizal Fungi addressed acknowledged. Fungal databases becoming important, therefore provide major databases. Edible medicinal huge medicines, especially Asia prospects discussed. Lifestyle changes (e.g., endophytes, pathogens, and/or saprobes) also extremely trend special issue Diversity.

Language: Английский

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Management of Post-Harvest Anthracnose: Current Approaches and Future Perspectives

Plants, Journal Year: 2022, Volume and Issue: 11(14), P. 1856 - 1856

Published: July 15, 2022

Anthracnose is a severe disease caused by Colletotrichum spp. on several crop species. Fungal infections can occur both in the field and at post-harvest stage causing lesions fruits economic losses. Physical treatments synthetic fungicides have traditionally been preferred means to control anthracnose adverse effects; however, urgent need decrease use of toxic chemicals led investigation innovative sustainable protection techniques. Evidence for efficacy biological agents vegetal derivates has reported; their introduction into actual strategies requires solutions critical issues. Biotechnology-based approaches also explored, revealing opportunity develop safe methods management through genome editing RNA interference technologies. Nevertheless, besides number advantages related use, e.g., putative absence effects due high specificity, aspects remain be clarified enable Integrated Pest Management (IPM) protocols against disease.

Language: Английский

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Mango anthracnose disease: the current situation and direction for future research

Frontiers in Microbiology, Journal Year: 2023, Volume and Issue: 14

Published: Aug. 24, 2023

Mango anthracnose disease (MAD) is a destructive of mangoes, with estimated yield losses up to 100% in unmanaged plantations. Several strains that constitute

Language: Английский

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Green Management of Postharvest Anthracnose Caused by Colletotrichum gloeosporioides

Journal of Fungi, Journal Year: 2023, Volume and Issue: 9(6), P. 623 - 623

Published: May 28, 2023

Fruits and vegetables are constantly affected by postharvest diseases, of which anthracnose is one the most severe caused diverse Colletotrichum species, mainly C. gloeosporioides. In last few decades, chemical fungicides have been primary approach to control. However, recent trends regulations sought limit use these substances. Greener management includes a group sustainable alternatives that natural substances microorganisms control fungi. This comprehensive review contemporary research presents various gloeosporioides in vitro situ, ranging from biopolymers, essential oils, antagonistic cultivar resistance. Strategies such as encapsulation, biofilms, coatings, compounds secreted, antibiotics, lytic enzyme production revised. Finally, potential effects climate change on disease explored. can provide possible replacement for conventional using It methodologies not mutually exclusive be tune with needs interests new consumers environment. Overall, developing or has strong improving sustainability addressing challenges generated change.

Language: Английский

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Hosts of Colletotrichum

Mycosphere, Journal Year: 2023, Volume and Issue: 14(si2), P. 158 - 261

Published: Jan. 1, 2023

The taxonomy of Colletotrichum has undergone profound changes over the past decade, with ca.340 species now recognised, and grouped into 20 complexes (16 previously described four proposed in this work).Over that period, volatility taxonomic framework posed difficulties to aetiology anthracnose diseases along uncertainty on cross-infection potential, quarantine rules, pesticide management plant breeding strategies.Now is stabilising (still several new being named, but no longer representing major pathogens), there a point reviewing knowledge global way, pointing out relative importance each for host/crop identifying areas/crops where information missing (and are crops which nothing known regarding modern terms).Based 3400 host species-Colletotrichum occurrence records (considering only spp.identified terms), we have listed 760 (plants) analysed available reported from them, symptoms caused geographic distribution pathological relevance.Whereas some these hosts wild plants, work mostly focused cultivated plants therefore globally.In context fungi, compilation provides downstream users Mycology, namely those areas such as Plant Pathology, Protection Breeding, updated main causal agents crop/plant location, or alternatively an alert lack identity relevant given crop location.

Language: Английский

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Colletotrichum species pathogenic to strawberry: discovery history, global diversity, prevalence in China, and the host range of top two species

Phytopathology Research, Journal Year: 2022, Volume and Issue: 4(1)

Published: Nov. 16, 2022

Abstract Anthracnose caused by Colletotrichum species, is one of the most destructive diseases affecting strawberry production worldwide. Fungi genus , being ancient and co-evolved with flowering plants, rank eighth among top ten economically important fungal pathogens have diversified to adapt various hosts. Since it was first reported in United States 1931, anthracnose has spread globally, resulting devastating economic, social, ecological consequences. In a sense, produce organic impracticable largely because this disease. species pathogenic been widely characterized. The review focused on providing an accurate inventory via revisiting discovery history scrupulously over 90 years. A total 23 clustered into five complexes two singleton taxa were accepted as global occurrence illustrated. relative prevalence distinct associated systematically analyzed China. Finally, host range prevailing C. fructicola siamense also causing serious damages earth summarized, goal diagnosing accurately improving management agricultural ecosystem.

Language: Английский

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Genome-scale and multi-gene phylogenetic analyses of Colletotrichum spp. host preference and associated with medicinal plants

Mycosphere, Journal Year: 2023, Volume and Issue: 14(si2), P. 1 - 106

Published: Jan. 1, 2023

Colletotrichum is one of the most common phytopathogens worldwide, causing diseases in various commercially valuable hosts.Several species have been reported to infect medicinal plants.Although China a large-scale producer plant resources, that locally linked plants are poorly understood.Therefore, samples were collected from four provinces determine associated with local plants, resulting total 141 isolates.In conjunction morphology, multi-locus phylogenetic analyses (ITS, gapdh, his3, act, and tub2), PHI test revealed these strains belong 23 eight complexes, including seven new (C.castaneae, C. cypericola, gardeniae, kunmingense, ligustri, radermacherae, schefflerae) three host records (C.celtidis, iris, vittalense).In addition, we synonymise wuxuhaiense karsti, menglaense, pandanicola, andC.parvisporum siamense.Furthermore, understand mechanisms responsible for range preference also sequenced assembled whole-genome sequences gloeosporioides complex constructed phylogenies covering ten complexes singleton species.The comparative genome different lineages expanded gene families encoding CAZymes thought be likely explanations widespread polyphagous nature acutatum, boninense, complexes.A possible explanation graminicola may less pectinase-encoding families.The current study improves understanding diversity found on suggests members might serve as an important mechanism preference.

Language: Английский

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Chromosome-level analysis of the Colletotrichum graminicola genome reveals the unique characteristics of core and minichromosomes

Frontiers in Microbiology, Journal Year: 2023, Volume and Issue: 14

Published: March 23, 2023

The fungal pathogen

Language: Английский

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Genome evolution and transcriptome plasticity is associated with adaptation to monocot and dicot plants in Colletotrichum fungi

GigaScience, Journal Year: 2024, Volume and Issue: 13

Published: Jan. 1, 2024

Abstract Background Colletotrichum fungi infect a wide diversity of monocot and dicot hosts, causing diseases on almost all economically important plants worldwide. is also suitable model for studying gene family evolution fine scale to uncover events in the genome associated with biological changes. Results Here we present sequences 30 species covering within genus. Evolutionary analyses revealed that ancestor diverged late Cretaceous parallel diversification flowering plants. We provide evidence independent host jumps from dicots monocots during Colletotrichum, coinciding progressive shrinking plant cell wall degradative arsenal expansions lineage-specific families. Comparative transcriptomics 4 adapted different hosts similarity content but high modulation their transcription profiles substrates. Combining genomics transcriptomics, identified set core genes such as specific factors, putatively involved degradation. Conclusions These results indicate ancestral were certain branches progressively reshaping its regulation.

Language: Английский

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