Angelica cultivation and mycorrhizal inoculation improve microbial diversity, functions and network complexity of trace elements-polluted soil: A three-year field study DOI Creative Commons
Julien Langrand, Anissa Lounès‐Hadj Sahraoui, Papa Mamadou Sitor Ndour

et al.

Applied Soil Ecology, Journal Year: 2025, Volume and Issue: 210, P. 106082 - 106082

Published: April 11, 2025

Language: Английский

Depicting the Chemical Diversity of Bioactive Meroterpenoids Produced by the Largest Organism on Earth DOI Creative Commons
Sebastian Pfütze, Esteban Charria‐Girón,

Esther Schulzke

et al.

Angewandte Chemie International Edition, Journal Year: 2024, Volume and Issue: 63(16)

Published: Feb. 23, 2024

Abstract In this investigation, we explored the diversity of melleolide‐type meroterpenoids produced by Armillaria ostoyae , one largest and oldest organisms on Earth, using extracts from liquid solid fermentation media. The study unveiled three unprecedented dimeric bismelleolides novel fatty‐acid‐substituted congeners, along with 11 new 21 known derivatives. structures were elucidated 1D 2D NMR spectroscopy HRESI‐MS, ROESY spectral analysis for relative configurations. Absolute configurations determined crystal through ECD spectra comparison. A compound library facilitated metabolomics‐wide associations, revealing production patterns under different culture conditions. enabled assessments antimicrobial cytotoxic activities, that Δ 2,4 double bond is not crucial antifungal activity. Cytotoxicity was linked to presence an aldehyde at C1, but lost hydroxylation C13. Chemoinformatic analyses demonstrated intricate interplay chemical modifications biological properties. This marks first systematic exploration spp. meroterpenoid MS‐based untargeted metabolomics, offering insight into structure–activity relationships innovative chemoinformatics.

Language: Английский

Citations

8

Classes and phyla of the kingdom Fungi DOI Creative Commons
Nalin N. Wijayawardene, Kevin D. Hyde, Kirill V. Mikhailov

et al.

Fungal Diversity, Journal Year: 2024, Volume and Issue: 128(1), P. 1 - 165

Published: Oct. 15, 2024

Abstract Fungi are one of the most diverse groups organisms with an estimated number species in range 2–3 million. The higher-level ranking fungi has been discussed framework molecular phylogenetics since Hibbett et al., and definition higher ranks (e.g., phyla) ‘true fungi’ have revised several subsequent publications. Rapid accumulation novel genomic data advancements now facilitate a robust precise foundation for classification within kingdom. This study provides updated kingdom , drawing upon comprehensive phylogenomic analysis Holomycota which we outline well-supported nodes fungal tree explore more contentious groupings. We accept 19 phyla Fungi, viz . Aphelidiomycota Ascomycota Basidiobolomycota Basidiomycota Blastocladiomycota Calcarisporiellomycota Chytridiomycota Entomophthoromycota Entorrhizomycota Glomeromycota Kickxellomycota Monoblepharomycota Mortierellomycota Mucoromycota Neocallimastigomycota Olpidiomycota Rozellomycota Sanchytriomycota, Zoopagomycota In phylogenies, Caulochytriomycota resides ; thus, former is regarded as synonym latter, while Caulochytriomycetes viewed class provide description each phylum followed by its classes. A new subphylum, Sanchytriomycotina Karpov introduced only subphylum Sanchytriomycota subclass Pneumocystomycetidae Kirk al. Pneumocystomycetes invalid thus validated. Placements fossil classes also discussed, providing examples.

Language: Английский

Citations

8

Why Are There So Few Basidiomycota and Basal Fungi as Endophytes? A Review DOI Creative Commons
Nattawut Rungjindamai, E.B. Gareth Jones

Journal of Fungi, Journal Year: 2024, Volume and Issue: 10(1), P. 67 - 67

Published: Jan. 15, 2024

A review of selected studies on fungal endophytes confirms the paucity Basidiomycota and basal fungi, with almost 90% attributed to Ascomycota. Reasons for low number including Chytridiomycota, Mucoromycota, Mortierellomycota, are advanced, isolation procedure media, incubation period slow growth basidiomycetes, identification non-sporulating isolates, endophyte competition, fungus–host interactions. We compare detection through culture-dependent methods culture-independent methods, role fungi senescence host plant, next-generation studies.

Language: Английский

Citations

6

Ascomycetes from karst landscapes of Guizhou Province, China DOI

Jin-Feng Zhang,

Jian‐Kui Liu, Kevin D. Hyde

et al.

Fungal Diversity, Journal Year: 2023, Volume and Issue: 122(1), P. 1 - 160

Published: Sept. 1, 2023

Language: Английский

Citations

15

Functional Clustering of Metabolically Related Genes Is Conserved across Dikarya DOI Creative Commons

Gina M. Cittadino,

Johnathan Andrews,

Harpreet Purewal

et al.

Journal of Fungi, Journal Year: 2023, Volume and Issue: 9(5), P. 523 - 523

Published: April 28, 2023

Transcriptional regulation is vital for organismal survival, with many layers and mechanisms collaborating to balance gene expression. One layer of this genome organization, specifically the clustering functionally related, co-expressed genes along chromosomes. Spatial organization allows position effects stabilize RNA expression transcription, which can be advantageous a number reasons, including reductions in stochastic influences between products. The co-regulated families into functional clusters occurs extensively Ascomycota fungi. However, less characterized within related Basidiomycota fungi despite uses applications species clade. This review will provide insight prevalence, purpose, significance across Dikarya, foundational studies from Ascomycetes current state our understanding throughout representative Basidiomycete species.

Language: Английский

Citations

13

Comparative analysis of gut fungal composition and structure of the yaks under different feeding models DOI Creative Commons
Yanbin Zhu, Yangji Cidan,

Guangming Sun

et al.

Frontiers in Veterinary Science, Journal Year: 2023, Volume and Issue: 10

Published: June 15, 2023

The yaks that inhabit the Tibetan plateau are a rare breed is closely related to local economic development and human civilization. This ancient may have evolved unique gut microbiota due hypoxic high-altitude environment. susceptible external factors, but research regarding effects of different feeding models on fungal community in remains scarce. In this study, we compared analyzed composition variability among wild (WYG), house-feeding domestic (HFG), grazing (GYG). results revealed Basidiomycota Ascomycota were most preponderant phyla community, regardless models. Although types dominant did not change, their abundances did. Intergroup analysis diversity showed Shannon Simpson indices WYG GYG significantly higher than those HFG. Fungal taxonomic there 20 genera (Sclerostagonospora Didymella) between GYG, 16 (Thelebolus Cystobasidium) Furthermore, proportions 14 (Claussenomyces Papiliotrema) decreased, whereas eight (Stropharia Lichtheimia) increased HFG as GYG. Taken together, study indicated structure differ raised breeding groups.

Language: Английский

Citations

12

Enhanced humification attributed by the integration of Fenton reagent and oxalic acid during a co-composting of swine manure and corn straw: Impacts and the possible mechanisms DOI

Minna Jiao,

Feixue Yue,

Xiuna Ren

et al.

Chemical Engineering Journal, Journal Year: 2024, Volume and Issue: unknown, P. 155579 - 155579

Published: Sept. 1, 2024

Language: Английский

Citations

4

Microbial dynamics and agroforestry impact on soil ecosystem multifunctionality following forest conversion to macadamia-based systems DOI

Fandi Xu,

Zhihong Guo, Yuchun Yang

et al.

Applied Soil Ecology, Journal Year: 2025, Volume and Issue: 206, P. 105869 - 105869

Published: Jan. 8, 2025

Language: Английский

Citations

0

Long‐Term Intercropping With Nitrogen Management to Improve Soil Quality and Control Crop Diseases DOI Open Access

Bijie Hu,

Jing Zhang,

Jingxiu Xiao

et al.

Plant Cell & Environment, Journal Year: 2025, Volume and Issue: unknown

Published: Jan. 15, 2025

ABSTRACT Long‐term positioning experiments have demonstrated significant benefits in agricultural production and environmental protection. Faba bean‐wheat intercropping with nitrogen fertiliser can effectively mitigate the occurrence of faba bean wilt disease. Identifying optimal application rate is essential for enhancing disease control efficacy intercropping. This study aimed to investigate long‐term effects varying levels on physical, chemical, biological changes rhizosphere soil under conditions examine their relationship incidence In a 9‐year field experiment, two treatments 1 year (IF‐1) 9 years (IF‐9) were established four (N0: 0 kg ha −1 ; N1: 45 N2: 90 N3: 135 ). Rhizosphere from plants was collected assess corresponding indicators. promoted growth controlled by improving structure fertility quality (SQI). Under different levels, certain physical properties (moisture content, macroaggregate proportion, MWD, GMD) chemical (SOM, total carbon, SOC, nutrients, available nutrients) peaked N2 (90 ), SQI showing similar trend. Additionally, enhanced enzyme activity rhizosphere, reshaped microbial community composition, maximised beneficial microbes, reduced abundance pathogenic fungus Fusarium, achieved N2. at significantly improved, enhanced, plant pathogens modifying composition. alleviated disease, healthy growth, maintained function.

Language: Английский

Citations

0

Phytopathogenic fungi and oomycetes causing diseases in Theobroma cacao: chemical and genetic features DOI
Luis A. Ramírez‐Camejo, Candelario Rodríguez,

Ximena Florez‐Buitrago

et al.

Fungal Biology, Journal Year: 2025, Volume and Issue: 129(3), P. 101551 - 101551

Published: Feb. 19, 2025

Language: Английский

Citations

0