Journal of Innate Immunity,
Journal Year:
2023,
Volume and Issue:
15(1), P. 562 - 580
Published: Jan. 1, 2023
The
consequences
of
infection
with
severe
acute
respiratory
syndrome
coronavirus
2
(SARS-CoV-2)
can
range
from
asymptomatic
to
fatal
disease.
Variations
in
epithelial
susceptibility
SARS-CoV-2
depend
on
the
anatomical
location
proximal
distal
tract.
However,
cellular
biology
underlying
these
variations
is
not
completely
understood.
Thus,
air-liquid
interface
cultures
well-differentiated
primary
human
tracheal
and
bronchial
cells
were
employed
study
impact
composition
differentiation
by
transcriptional
(RNA
sequencing)
immunofluorescent
analyses.
Changes
investigated
varying
time
or
using
specific
compounds.
We
found
that
primarily
infected
only
ciliated
but
also
goblet
transient
secretory
cells.
Viral
replication
was
impacted
differences
composition,
which
depended
culturing
origin.
A
higher
percentage
correlated
a
viral
load.
DAPT
treatment,
increased
number
reduced
cells,
decreased
load,
indicating
contribution
infection.
Cell
entry
factors,
especially
cathepsin
L
transmembrane
protease
serine
2,
affected
time.
In
conclusion,
our
demonstrates
changes
related
mucociliary
system.
This
could
explain
part
variable
between
individuals
locations
Allergy,
Journal Year:
2022,
Volume and Issue:
78(2), P. 369 - 388
Published: Nov. 24, 2022
Abstract
There
has
been
an
important
change
in
the
clinical
characteristics
and
immune
profile
of
Coronavirus
disease
2019
(COVID‐19)
patients
during
pandemic
thanks
to
extensive
vaccination
programs.
Here,
we
highlight
recent
studies
on
COVID‐19,
from
immunological
protective
risk
factors
for
severity
mortality
COVID‐19.
The
efficacy
COVID‐19
vaccines
potential
allergic
reactions
after
administration
are
also
discussed.
occurrence
new
variants
concerns
such
as
Omicron
BA.2,
BA.4,
BA.5
global
have
changed
scenario
Multisystem
inflammatory
syndrome
children
(MIS‐C)
may
cause
severe
heterogeneous
but
with
a
lower
rate.
Perturbations
immunity
T
cells,
B
mast
well
autoantibodies
metabolic
reprogramming
contribute
long‐term
symptoms
is
conflicting
evidence
about
whether
atopic
diseases,
asthma
rhinitis,
associated
susceptibility
better
outcomes
At
beginning
pandemic,
European
Academy
Allergy
Clinical
Immunology
(EAACI)
developed
guidelines
that
provided
timely
information
management
diseases
preventive
measures
reduce
transmission
clinics.
distribution
emerging
acute
respiratory
coronavirus
2
(SARS‐CoV‐2)
reduced
pathogenic
dramatically
decreased
morbidity,
severity,
Nevertheless,
breakthrough
infection
remains
challenge
control.
Hypersensitivity
(HSR)
low
compared
other
vaccines,
these
were
addressed
EAACI
statements
indications
reactions,
including
anaphylaxis
vaccines.
We
gained
depth
knowledge
experience
over
years
since
start
yet
full
eradication
SARS‐CoV‐2
not
horizon.
Novel
strategies
warranted
prevent
high‐risk
groups,
development
MIS‐C
long
Nature Microbiology,
Journal Year:
2024,
Volume and Issue:
9(5), P. 1293 - 1311
Published: April 15, 2024
Abstract
Children
infected
with
SARS-CoV-2
rarely
progress
to
respiratory
failure.
However,
the
risk
of
mortality
in
people
over
85
years
age
remains
high.
Here
we
investigate
differences
cellular
landscape
and
function
paediatric
(<12
years),
adult
(30–50
years)
older
(>70
ex
vivo
cultured
nasal
epithelial
cells
response
infection
SARS-CoV-2.
We
show
that
cell
tropism
SARS-CoV-2,
expression
ACE2
TMPRSS2
subtypes,
differ
between
groups.
While
ciliated
are
viral
replication
centres
across
all
groups,
a
distinct
goblet
inflammatory
subtype
emerges
cultures
shows
high
interferon-stimulated
genes
incomplete
replication.
In
contrast,
proportional
increase
basaloid-like
cells,
which
facilitate
spread
associated
altered
repair
pathways.
confirm
age-specific
induction
these
types
by
integrating
data
from
COVID-19
studies
validate
our
vitro
model
recapitulates
early
responses
infection.
ABSTRACT
The
SARS-CoV-2
pandemic
was
marked
with
emerging
viral
variants,
some
of
which
were
designated
as
variants
concern
(VOCs)
due
to
selection
and
rapid
circulation
in
the
human
population.
Here,
we
elucidate
functional
features
each
VOC
linked
variations
replication
rate.
Patient-derived
primary
nasal
cultures
grown
at
air-liquid
interface
used
model
upper
respiratory
infection
compared
cell
lines
derived
from
lung
epithelia.
All
VOCs
replicated
higher
titers
than
ancestral
virus,
suggesting
a
for
efficiency.
In
cultures,
Omicron
highest
early
time
points,
followed
by
Delta,
paralleling
comparative
studies
population
sampling.
viruses
entered
primarily
via
transmembrane
serine
protease
2
(TMPRSS2)-dependent
pathway,
more
likely
use
an
endosomal
route
entry.
activated
overcame
dsRNA-induced
cellular
responses,
including
interferon
(IFN)
signaling,
oligoadenylate
ribonuclease
L
degradation,
protein
kinase
R
activation.
Among
VOCs,
induced
expression
most
IFN
IFN-stimulated
genes.
Infections
resulted
damage,
compromise
barrier
integrity
loss
cilia
ciliary
beating
function,
especially
during
Delta
infection.
Overall,
optimized
tract
least
favorable
lower
line,
cytopathic
both
cells.
Our
findings
highlight
differences
among
level
imply
distinct
mechanisms
pathogenesis
infected
individuals.
IMPORTANCE
Comparative
analysis
infections
virus
concern,
Alpha,
Beta,
Omicron,
indicated
that
selected
efficiency
replication.
patient-derived
infection,
reached
finding
confirmed
parallel
sampling
studies.
While
all
dsRNA-mediated
host
strongest
interferon-stimulated
gene
response.
damaging
cells
syncytia
formation,
integrity,
function.
Frontiers in Cellular and Infection Microbiology,
Journal Year:
2022,
Volume and Issue:
12
Published: Oct. 21, 2022
As
new
pathogens
emerge,
challenges
must
be
faced.
This
is
no
different
in
infectious
disease
research,
where
identifying
the
best
tools
available
laboratories
to
conduct
an
investigation
can,
at
least
initially,
particularly
complicated.
However,
context
of
emerging
virus,
such
as
SARS-CoV-2,
which
was
recently
detected
China
and
has
become
a
global
threat
healthcare
systems,
developing
models
infection
pathogenesis
urgently
required.
Cell-based
approaches
are
crucial
understanding
coronavirus
biology,
growth
kinetics,
tropism.
Usually,
laboratory
cell
lines
first
line
experimental
study
viral
pathogenicity
perform
assays
aimed
screening
antiviral
compounds
efficient
blocking
replication
viruses,
saving
time
resources,
reducing
use
animals.
determining
ideal
type
can
challenging,
especially
when
several
researchers
have
adapt
their
studies
specific
requirements.
review
strives
guide
scientists
who
venturing
into
studying
SARS-CoV-2
help
them
choose
right
cellular
models.
It
revisits
basic
concepts
virology
presents
currently
Proceedings of the National Academy of Sciences,
Journal Year:
2023,
Volume and Issue:
120(15)
Published: April 6, 2023
The
nasal
epithelium
is
the
initial
entry
portal
and
primary
barrier
to
infection
by
all
human
coronaviruses
(HCoVs).
We
utilize
epithelial
cells
grown
at
air-liquid
interface,
which
recapitulate
heterogeneous
cellular
population
as
well
mucociliary
clearance
functions
of
in
vivo
epithelium,
compare
lethal
[Severe
acute
respiratory
syndrome
(SARS)-CoV-2
Middle
East
syndrome-CoV
(MERS-CoV)]
seasonal
(HCoV-NL63
HCoV-229E)
HCoVs.
All
four
HCoVs
replicate
productively
cultures,
though
replication
differentially
modulated
temperature.
Infections
conducted
33
°C
vs.
37
(reflective
temperatures
upper
lower
airway,
respectively)
revealed
that
both
-229E)
significantly
attenuated
°C.
In
contrast,
SARS-CoV-2
MERS-CoV
temperatures,
enhanced
late
infection.
These
also
diverge
terms
cytotoxicity
induced
following
infection,
cause
disruption,
while
does
not.
Treatment
cultures
with
type
2
cytokine
IL-13
mimic
asthmatic
airways
impacts
HCoV
receptor
availability
replication.
DPP4
expression
increases
treatment,
whereas
ACE2,
used
HCoV-NL63,
down-regulated.
treatment
enhances
HCoV-229E
but
reduces
reflecting
impact
on
availability.
This
study
highlights
diversity
among
during
likely
influence
downstream
outcomes
such
disease
severity
transmissibility.
PLoS Pathogens,
Journal Year:
2023,
Volume and Issue:
19(8), P. e1011571 - e1011571
Published: Aug. 10, 2023
Mucins
play
an
essential
role
in
protecting
the
respiratory
tract
against
microbial
infections
while
also
acting
as
binding
sites
for
bacterial
and
viral
adhesins.
The
heavily
O-glycosylated
gel-forming
mucins
MUC5AC
MUC5B
eliminate
pathogens
by
mucociliary
clearance.
Transmembrane
MUC1,
MUC4,
MUC16
can
restrict
invasion
at
apical
surface
of
epithelium.
In
this
study,
we
determined
impact
host
mucin
glycans
on
epithelial
entry
SARS-CoV-2.
Human
lung
Calu-3
cells
express
SARS-CoV-2
receptor
ACE2
high
levels
glycosylated
but
not
MUC4
MUC16,
their
cell
surface.
O-glycan-specific
mucinase
StcE
specifically
removed
part
MUC1
extracellular
domain
leaving
underlying
SEA
cytoplasmic
tail
intact.
treatment
significantly
enhanced
infection
with
pseudovirus
authentic
virus,
removal
terminal
sialic
acid
fucose
from
did
entry.
cells,
transmembrane
are
located
to
close
proximity
results
purified
spike
protein.
Both
expressed
human
organoid-derived
air-liquid
interface
(ALI)
differentiated
airway
cultures
led
increased
replication.
these
cultures,
was
highly
non-ciliated
enriched
goblet
cells.
conclusion,
domains
different
might
have
similar
protective
functions
types
restricting
Cell Reports,
Journal Year:
2024,
Volume and Issue:
43(4), P. 114076 - 114076
Published: April 1, 2024
The
severe
acute
respiratory
syndrome
coronavirus
2
pandemic
is
characterized
by
the
emergence
of
novel
variants
concern
(VOCs)
that
replace
ancestral
strains.
Here,
we
dissect
complex
selective
pressures
evaluating
variant
fitness
and
adaptation
in
human
tissues.
We
evaluate
viral
properties
host
responses
to
reconstruct
forces
behind
D614G
through
Omicron
(BA.1)
emergence.
observe
differential
replication
airway
epithelia,
differences
cellular
tropism,
virus-induced
cytotoxicity.
accumulates
most
mutations
after
infection,
supporting
zoonosis
airway.
perform
head-to-head
competitions
highest
for
Gamma
Delta.
Under
these
conditions,
RNA
recombination
favors
encoding
B.1.617.1
lineage
3'
end.
Based
on
growth
kinetics,
Alpha,
Gamma,
Delta
exhibit
increased
compared
D614G.
In
contrast,
global
success
likely
derives
from
transmission
antigenic
variation.
Our
data
provide
molecular
evidence
support
epidemiological
observations
VOC
Open Forum Infectious Diseases,
Journal Year:
2022,
Volume and Issue:
9(8)
Published: July 27, 2022
Abstract
Background
Based
on
studies
implicating
the
type
2
cytokine
interleukin
13
(IL-13)
as
a
potential
contributor
to
critical
coronavirus
disease
2019
(COVID-19),
this
trial
was
designed
an
early
phase
study
assess
dupilumab,
monoclonal
antibody
that
blocks
IL-13
and
4
signaling,
for
treatment
of
inpatients
with
COVID-19.
Methods
We
conducted
2a
randomized,
double-blind,
placebo-controlled
(NCT04920916)
safety
efficacy
dupilumab
plus
standard
care
vs
placebo
in
mitigating
respiratory
failure
death
those
hospitalized
Results
Forty
eligible
subjects
were
enrolled
from
June
November
2021.
There
no
statistically
significant
difference
adverse
events
nor
primary
endpoint
ventilator-free
survival
at
day
28
between
arms.
However,
secondary
mortality
60,
there
deaths
group
compared
5
(60-day
survival:
89.5%
76.2%;
adjusted
hazard
ratio
[HR],
0.05
[95%
confidence
interval
{CI},
.004–.72];
P
=
.03).
Among
who
not
intensive
unit
(ICU)
randomization,
3
arm
admitted
ICU
6
(17.7%
37.5%;
HR,
0.44
CI,
.09–2.09];
.30).
Last,
we
found
evidence
signaling
blockade
through
analysis
immune
biomarkers
over
time.
Conclusions
Although
outcome
reached,
observed
higher
by
60.
Clinical
Trials
Registration
NCT04920916.