bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: Oct. 5, 2023
Abstract
The
function
of
neuronal
networks
is
determined
not
only
by
synaptic
connectivity
but
also
neuromodulatory
systems
that
broadcast
information
via
distributed
connections
and
volume
transmission.
To
understand
the
molecular
constraints
organize
signaling
in
telencephalon
adult
zebrafish
we
used
transcriptomics
additional
approaches
to
delineate
cell
types,
determine
their
phylogenetic
conservation,
map
expression
marker
genes
at
high
granularity.
combinatorial
GPCRs
type
markers
indicates
all
types
are
subject
modulation
multiple
monoaminergic
distinct
combinations
neuropeptides.
Individual
were
associated
with
(typically
>30)
expressed
a
few
diagnostic
levels,
suggesting
different
act
combination
albeit
unequal
weights.
These
results
provide
detailed
brain
areas
telencephalon,
identify
core
components
networks,
highlight
type-specificity
neuropeptides
GPCRs,
begin
decipher
logic
neuromodulation.
Nature Communications,
Journal Year:
2023,
Volume and Issue:
14(1)
Published: May 26, 2023
Abstract
Maintaining
or
shifting
between
behavioral
states
according
to
context
is
essential
for
animals
implement
fitness-promoting
strategies.
How
the
integration
of
internal
state,
past
experience
and
sensory
inputs
orchestrates
persistent
multidimensional
changes
remains
poorly
understood.
Here,
we
show
that
C.
elegans
integrates
environmental
temperature
food
availability
over
different
timescales
engage
in
dwelling,
scanning,
global
glocal
search
strategies
matching
thermoregulatory
feeding
needs.
Transition
states,
each
case,
involves
regulating
multiple
processes
including
AFD
FLP
tonic
neurons
activity,
neuropeptide
expression
downstream
circuit
responsiveness.
State-specific
FLP-6
FLP-5
signaling
acts
on
a
distributed
set
inhibitory
GPCR(s)
promote
scanning
search,
respectively,
bypassing
dopamine
glutamate-dependent
state
control.
Integration
multimodal
via
multisite
regulation
circuits
might
represent
conserved
regulatory
logic
flexible
prioritization
valence
when
operating
transitions.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2022,
Volume and Issue:
unknown
Published: Oct. 31, 2022
Summary
Efforts
are
currently
ongoing
to
map
synaptic
wiring
diagrams
or
connectomes
in
order
understand
the
neural
basis
of
brain
function.
However,
chemical
synapses
represent
only
one
type
functionally
important
neuronal
connection;
particular,
extrasynaptic,
“wireless”
signaling
by
neuropeptides
is
widespread
and
plays
essential
roles
all
nervous
systems.
By
integrating
single-cell
anatomical
gene
expression
datasets
with
a
biochemical
analysis
receptor-ligand
interactions,
we
have
generated
draft
connectome
neuropeptide
C.
elegans
system.
This
characterized
high
connection
density,
extended
cascades,
autocrine
foci,
decentralized
topology,
large,
highly
interconnected
core
containing
three
constituent
communities
sharing
similar
patterns
input
connectivity.
Intriguingly,
several
most
nodes
this
little-studied
neurons
that
specialized
for
peptidergic
neuromodulation.
We
anticipate
neuropeptidergic
will
serve
as
prototype
basic
organizational
principles
neuroendocrine
networks.
Neuropeptides
are
ancient
signaling
molecules
in
animals
but
only
few
peptide
receptors
known
outside
bilaterians.
Cnidarians
possess
a
large
number
of
G
protein-coupled
(GPCRs)
–
the
most
common
bilaterian
neuropeptides
these
remain
orphan
with
no
ligands.
We
searched
for
sea
anemone
Nematostella
vectensis
and
created
library
64
peptides
derived
from
33
precursors.
In
large-scale
pharmacological
screen
161
N.
GPCRs,
we
identified
31
specifically
activated
by
1
to
3
14
peptides.
Mapping
GPCR
neuropeptide
expression
single-cell
sequencing
data
revealed
how
cnidarian
tissues
extensively
connected
multilayer
peptidergic
networks.
Phylogenetic
analysis
direct
orthology
systems
supports
independent
expansion
cnidarians
ancestral
peptide-receptor
pairs.
Annual Review of Cell and Developmental Biology,
Journal Year:
2023,
Volume and Issue:
39(1), P. 45 - 65
Published: June 20, 2023
Myriad
mechanisms
have
evolved
to
adapt
changing
environments.
Environmental
stimuli
alter
organisms'
physiology
create
memories
of
previous
Whether
these
environmental
can
cross
the
generational
barrier
has
interested
scientists
for
centuries.
The
logic
passing
on
information
from
generation
is
not
well
understood.
When
it
useful
remember
ancestral
conditions,
and
when
might
be
deleterious
continue
respond
a
context
that
may
no
longer
exist?
key
found
in
understanding
conditions
trigger
long-lasting
adaptive
responses.
We
discuss
biological
systems
use
conditions.
Responses
spanning
different
timescales
employ
molecular
machineries
result
differences
duration
or
intensity
exposure.
Understanding
components
multigenerational
inheritance
underlying
beneficial
maladaptive
adaptations
fundamental
how
organisms
acquire
transmit
across
generations.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: Jan. 5, 2024
SUMMARY
When
animals
are
infected
by
a
pathogen,
peripheral
sensors
of
infection
signal
to
the
brain
coordinate
set
adaptive
behavioral
changes
known
as
sickness
behaviors.
While
pathways
that
from
periphery
have
been
intensively
studied
in
recent
years,
how
central
circuits
reconfigured
elicit
behaviors
is
not
well
understood.
Here
we
find
neuromodulatory
systems
linked
stress
and
satiety
recruited
upon
drive
C.
elegans
.
Upon
chronic
bacterium
Pseudomonas
aeruginosa
PA14,
decrease
their
feeding
behavior,
then
display
reversible
bouts
quiescence,
eventually
die.
The
ALA
neuron
its
neuropeptides
FLP-7,
FLP-24,
NLP-8,
which
control
stress-induced
sleep
uninfected
animals,
promote
PA14-induced
reduction.
However,
neuropeptide
FLP-13
instead
acts
delay
quiescence
death
animals.
Cell-specific
genetic
perturbations
show
neurons
release
distinct
ALA.
A
brain-wide
imaging
screen
reveals
infection-induced
involves
ASI
DAF-7/TGF-beta,
satiety-induced
Our
results
suggest
common
neuromodulators
across
different
physiological
states,
acting
neural
sources
combinations
state-dependent
Nature Communications,
Journal Year:
2023,
Volume and Issue:
14(1)
Published: July 14, 2023
Abstract
FMRFamides
are
evolutionarily
conserved
neuropeptides
that
play
critical
roles
in
behavior,
energy
balance,
and
reproduction.
Here,
we
show
FMRFamide
signaling
from
the
nervous
system
is
for
rhythmic
activation
of
a
single
cell
previously
unknown
function,
head
mesodermal
(hmc)
C.
elegans
.
Behavioral,
calcium
imaging,
genetic
studies
reveal
release
FLP-22
neuropeptide
AVL
neuron
response
to
pacemaker
activates
hmc
every
50
s
through
an
frpr-17
G
protein-coupled
receptor
(GPCR)
protein
kinase
A
cascade
hmc.
results
muscle
contraction
coupling
by
gap
junctions
composed
UNC-9/Innexin.
inhibited
neuronal
second
FMRFamide-like
neuropeptide,
FLP-9,
which
functions
its
GPCR,
frpr-21
,
This
study
reveals
function
two
opposing
pathways
controlling
target
volume
transmission.
Neuropeptides
are
ancient
signaling
molecules
in
animals
but
only
few
peptide
receptors
known
outside
bilaterians.
Cnidarians
possess
a
large
number
of
G
protein-coupled
(GPCRs)
–
the
most
common
bilaterian
neuropeptides
these
remain
orphan
with
no
ligands.
We
searched
for
sea
anemone
Nematostella
vectensis
and
created
library
64
peptides
derived
from
33
precursors.
In
large-scale
pharmacological
screen
161
N.
GPCRs,
we
identified
31
specifically
activated
by
one
14
peptides.
Mapping
GPCR
neuropeptide
expression
to
single-cell
sequencing
data
revealed
how
cnidarian
tissues
extensively
wired
multilayer
peptidergic
networks.
Phylogenetic
analysis
direct
orthology
systems
supports
independent
expansion
cnidarians
ancestral
peptide-receptor
pairs.
Neuropeptides
are
ancient
signaling
molecules
in
animals
but
only
few
peptide
receptors
known
outside
bilaterians.
Cnidarians
possess
a
large
number
of
G
protein-coupled
(GPCRs)
–
the
most
common
bilaterian
neuropeptides
these
remain
orphan
with
no
ligands.
We
searched
for
sea
anemone
Nematostella
vectensis
and
created
library
64
peptides
derived
from
33
precursors.
In
large-scale
pharmacological
screen
161
N.
GPCRs,
we
identified
31
specifically
activated
by
1
to
3
14
peptides.
Mapping
GPCR
neuropeptide
expression
single-cell
sequencing
data
revealed
how
cnidarian
tissues
extensively
connected
multilayer
peptidergic
networks.
Phylogenetic
analysis
direct
orthology
systems
supports
independent
expansion
cnidarians
ancestral
peptide-receptor
pairs.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: Jan. 7, 2023
Balance
and
movement
are
impaired
in
a
wide
variety
of
neurological
disorders.
Recent
advances
behavioral
monitoring
provide
unprecedented
access
to
posture
locomotor
kinematics,
but
without
the
throughput
scalability
necessary
screen
candidate
genes
/
potential
therapeutics.
We
present
powerful
solution:
Scalable
Apparatus
Measure
Posture
Locomotion
(SAMPL).
SAMPL
includes
extensible
imaging
hardware
low-cost
open-source
acquisition
software
with
real-time
processing.
first
demonstrate
that
SAMPL's
can
acquire
data
from
D.
melanogaster,
C.
elegans,
rerio
as
they
move
vertically.
Next,
we
leverage
rapidly
(two
weeks)
gather
new
zebrafish
dataset.
use
analysis
visualization
tools
replicate
extend
our
current
understanding
how
balance
navigate
through
vertical
environment.
discover
(1)
key
kinematic
parameters
vary
systematically
genetic
background,
(2)
such
background
variation
is
small
relative
changes
accompany
early
development.
Finally,
simulate
ability
resolve
differences
or
navigation
function
affect
size
gathered
--
for
screens.
Taken
together,
apparatus,
data,
solution
labs
using
animals
investigate
disorders
at
scale.
More
broadly,
both
an
adaptable
resource
looking
process
videographic
measures
behavior
real-time,
exemplar
scale
enable
screening.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: April 2, 2023
Animals
generate
a
wide
range
of
highly
coordinated
motor
outputs,
which
allows
them
to
execute
purposeful
behaviors.
Individual
neuron
classes
in
the
circuits
that
behavior
have
remarkable
capacity
for
flexibility,
as
they
exhibit
multiple
axonal
projections,
transmitter
systems,
and
modes
neural
activity.
How
these
multi-functional
properties
neurons
enable
generation
behaviors
remains
unknown.
Here
we
show
HSN