Diterpene Biosynthesis in Catenulispora acidiphila : On the Mechanism of Catenul‐14‐en‐6‐ol Synthase DOI Creative Commons
Geng Li, Yue‐Wei Guo, Jeroen S. Dickschat

et al.

Angewandte Chemie International Edition, Journal Year: 2020, Volume and Issue: 60(3), P. 1488 - 1492

Published: Nov. 10, 2020

A new diterpene synthase from the actinomycete Catenulispora acidiphila was identified and structures of its products were elucidated, including absolute configurations by an enantioselective deuteration approach. The mechanism cationic terpene cyclisation cascade deeply studied through use isotopically labelled substrates substrate analogues with partially blocked reactivity, resulting in derailment that gave further insights into intermediates along cascade. Their chemistry studied, leading to biomimetic synthesis a diterpenoid analogue brominated sesquiterpene known red seaweed Laurencia microcladia.

Language: Английский

Marine natural products DOI
Anthony R. Carroll, Brent R. Copp, Rohan A. Davis

et al.

Natural Product Reports, Journal Year: 2021, Volume and Issue: 38(2), P. 362 - 413

Published: Jan. 1, 2021

This review covers the literature published in 2019 for marine natural products (MNPs), with 719 citations (701 period January to December 2019) referring compounds isolated from microorganisms and phytoplankton, green, brown red algae, sponges, cnidarians, bryozoans, molluscs, tunicates, echinoderms, mangroves other intertidal plants microorganisms. The emphasis is on new (1490 440 papers 2019), together relevant biological activities, source organisms country of origin. Pertinent reviews, biosynthetic studies, first syntheses, syntheses that led revision structures or stereochemistries, have been included. Methods used study fungi their chemical diversity also discussed.

Language: Английский

Citations

298

Recent trends in biocatalysis DOI Creative Commons
Dong Yi, Thomas Bayer, Christoffel P. S. Badenhorst

et al.

Chemical Society Reviews, Journal Year: 2021, Volume and Issue: 50(14), P. 8003 - 8049

Published: Jan. 1, 2021

Technological developments enable the discovery of novel enzymes, advancement enzyme cascade designs and pathway engineering, moving biocatalysis into an era technology integration, intelligent manufacturing enzymatic total synthesis.

Language: Английский

Citations

284

Structural Insights into Three Sesquiterpene Synthases for the Biosynthesis of Tricyclic Sesquiterpenes and Chemical Space Expansion by Structure-Based Mutagenesis DOI

Tingting Lou,

Annan Li,

Houchao Xu

et al.

Journal of the American Chemical Society, Journal Year: 2023, Volume and Issue: 145(15), P. 8474 - 8485

Published: April 5, 2023

The cyclization of farnesyl diphosphate (FPP) into highly strained polycyclic sesquiterpenes is challenging. We here determined the crystal structures three sesquiterpene synthases (STSs, namely, BcBOT2, DbPROS, and CLM1) catalyzing biosynthesis tricyclic presilphiperfolan-8β-ol (1), Δ6-protoilludene (2), longiborneol (3). All STS contain a substrate mimic, benzyltriethylammonium cation (BTAC), in their active sites, providing ideal templates for quantum mechanics/molecular mechanics (QM/MM) analyses toward catalytic mechanisms. QM/MM-based molecular dynamics (MD) simulations revealed cascade reactions enzyme products, different key site residues that play important roles stabilizing reactive carbocation intermediates along pathways. Site-directed mutagenesis experiments confirmed these concomitantly resulted 17 shunt products (4-20). Isotopic labeling addressed hydride methyl migrations main several products. These combined methods provided deep insights mechanisms STSs demonstrated how chemical space can rationally be expanded, which may facilitate applications synthetic biology approaches pharmaceutical perfumery agents.

Language: Английский

Citations

47

Terpene synthases in disguise: enzymology, structure, and opportunities of non-canonical terpene synthases DOI
Jeffrey D. Rudolf, Chin‐Yuan Chang

Natural Product Reports, Journal Year: 2019, Volume and Issue: 37(3), P. 425 - 463

Published: Oct. 25, 2019

Twelve families of enzymes that perform terpene synthase-like reactions but do not resemble canonical synthases in sequence or structure are reviewed.

Language: Английский

Citations

136

Bacterial terpenome DOI
Jeffrey D. Rudolf, Tyler A. Alsup, Baofu Xu

et al.

Natural Product Reports, Journal Year: 2020, Volume and Issue: 38(5), P. 905 - 980

Published: Nov. 10, 2020

We highlight the current state of bacterial terpenome, emphasizing discoveries, structures, biosynthetic pathways, and biological activities these terpenoid natural products.

Language: Английский

Citations

129

Bacterial terpene biosynthesis: challenges and opportunities for pathway engineering DOI Creative Commons
Eric J. N. Helfrich, Geng-Min Lin,

Christopher A. Voigt

et al.

Beilstein Journal of Organic Chemistry, Journal Year: 2019, Volume and Issue: 15, P. 2889 - 2906

Published: Nov. 29, 2019

Terpenoids are the largest and structurally most diverse class of natural products. They possess potent specific biological activity in multiple assays against diseases, including cancer malaria as notable examples. Although number characterized terpenoid molecules is huge, our knowledge how they biosynthesized limited, particularly when compared to well-studied thiotemplate assembly lines. Bacteria have only recently been recognized having genetic potential biosynthesize a large complex terpenoids, but current ability associate with molecular structure severely restricted. The canonical terpene biosynthetic pathway uses single enzyme form cyclized hydrocarbon backbone followed by modifications suite tailoring enzymes that can generate dozens different products from backbone. This functional promiscuity pathways renders biosynthesis susceptible rational engineering using latest developments field synthetic biology. These engineered will not facilitate creation both known novel their development deepen understanding significant branch biosynthesis. insights gained likely empower greater degree proficiency for non-natural pave way towards biotechnological production high value terpenoids.

Language: Английский

Citations

105

Biosynthesis, evolution and ecology of microbial terpenoids DOI
Mariana Ávalos, Paolina Garbeva, Lisa Vader

et al.

Natural Product Reports, Journal Year: 2021, Volume and Issue: 39(2), P. 249 - 272

Published: Oct. 9, 2021

Terpenoids have diverse bioecological roles in all kingdoms of life. Here we discuss the evolution and ecological functions microbial terpenoids their possible applications.

Language: Английский

Citations

98

Alternative metabolic pathways and strategies to high-titre terpenoid production inEscherichia coli DOI Creative Commons
Mauro A. Rinaldi, Clara A. Ferraz, Nigel S. Scrutton

et al.

Natural Product Reports, Journal Year: 2021, Volume and Issue: 39(1), P. 90 - 118

Published: July 7, 2021

Covering: up to 2021Terpenoids are a diverse group of chemicals used in wide range industries. Microbial terpenoid production has the potential displace traditional manufacturing these compounds with renewable processes, but further titre improvements needed reach cost competitiveness. This review discusses strategies increase titres

Language: Английский

Citations

68

Biocatalytic One-Carbon Ring Expansion of Aziridines to Azetidines via a Highly Enantioselective [1,2]-Stevens Rearrangement DOI
David C. Miller,

Ravi Lal,

Luca Marchetti

et al.

Journal of the American Chemical Society, Journal Year: 2022, Volume and Issue: 144(11), P. 4739 - 4745

Published: March 8, 2022

We report enantioselective one-carbon ring expansion of aziridines to make azetidines as a new-to-nature activity engineered "carbene transferase" enzymes. A laboratory-evolved variant cytochrome P450BM3, P411-AzetS, not only exerts unparalleled stereocontrol (99:1 er) over [1,2]-Stevens rearrangement but also overrides the inherent reactivity aziridinium ylides, cheletropic extrusion olefins, perform rearrangement. By controlling fate highly reactive ylide intermediates, these evolvable biocatalysts promote transformation which cannot currently be performed using other catalyst classes.

Language: Английский

Citations

55

Catalytic role of carbonyl oxygens and water in selinadiene synthase DOI
Yongheng Wang, Houchao Xu,

Jian Zou

et al.

Nature Catalysis, Journal Year: 2022, Volume and Issue: 5(2), P. 128 - 135

Published: Feb. 17, 2022

Language: Английский

Citations

48