Research Square (Research Square),
Journal Year:
2022,
Volume and Issue:
unknown
Published: June 17, 2022
Abstract
N6-Methyladenosine
(m6A)
are
significant
in
directing
different
genes’
expression
and
their
phenotype
types
of
cancers.
On
the
other
hand,
function
m6A
seminomatous
germ
cell
tumors
(SGCT)
is
still
unexplored.
Our
research
attempts
to
demonstrate
disease-free
prognosis
value
RNA
methylation
regulators
SGCT.
The
gene
accompanying
clinical
data
65
SGCT
tissues
85
NSGCT
retrieved
from
TCGA
database
were
analyzed.
landscape
was
displayed.
All
patients
grouped
into
two
clusters
by
consensus
clustering
regulators,
connected
clinicopathological
characteristics
SGCT(p
=
0.015).
Furthermore,
risk
score(1.52YTHDC1
+
2.22HNRNPC-2.735WTAP)
model
obtained
constructed
univariate
Cox
regression
analysis,
least
absolute
shrinkage
selection
operator
(LASSO)
regression.
score
interrelated
with
stage
status
laterality
Under
same
conditions,
right
side
may
have
a
higher
than
left
one.
More
significantly,
can
serve
as
an
self-supporting
prognostic
marker
for
patients.
Therefore,
also
played
important
role
its
survival
prognosis.
Frontiers in Immunology,
Journal Year:
2023,
Volume and Issue:
14
Published: March 7, 2023
Recent
studies
have
demonstrated
that
N6-methyladenosine
(m6A),
the
most
abundant,
dynamic,
and
reversible
epigenetic
RNA
modification
in
eukaryotes,
is
regulated
by
a
series
of
enzymes,
including
methyltransferases
(writers),
demethylases
(erasers),
m6A
recognition
proteins
(readers).
Aberrant
regulation
pivotal
for
tumorigenesis,
progression,
invasion,
metastasis,
apoptosis
malignant
tumors.
Immune
checkpoint
inhibitors
(ICIs)
has
revolutionized
cancer
treatment,
as
recognized
2018
Nobel
Prize
Medicine
Physiology.
However,
not
all
patients
response
to
ICI
therapy,
which
thought
be
result
intricate
immune
escape
mechanisms.
Recently,
numerous
suggested
novel
role
tumor
evasion.
Herein,
we
review
relevant
mechanisms
regulators
regulating
various
key
signaling
pathways
biology
how
modifications
regulate
expression
checkpoints,
opening
new
window
understand
roles
In
addition,
highlight
prospects
development
directions
future
combined
immunotherapy
strategies
based
on
targeting,
providing
promoting
treatment
outcomes
inhibitors.
Frontiers in Immunology,
Journal Year:
2022,
Volume and Issue:
13
Published: Sept. 26, 2022
The
immune
microenvironment
at
the
maternal-fetal
interface
was
determined
by
crosstalk
between
trophoblast
and
maternal-derived
cells,
which
dynamically
changed
during
whole
gestation.
Trophoblasts
act
as
innate
cells
dialogue
with
to
ensure
early
embryonic
development,
depending
on
local
microenvironment.
Therefore,
dysfunctions
in
trophoblasts
maternal
decidual
contribute
pregnancy
complications,
especially
recurrent
loss
pregnancy.
Since
many
unknown
regulatory
factors
still
affect
complex
status,
exploring
new
potential
aspects
that
could
influence
is
essential.
RNA
methylation
plays
an
important
role
contributing
transcriptional
regulation
of
various
cells.
Sufficient
studies
have
shown
crucial
roles
N6-methyladenosine
(m6A)-
m6A-associated-
regulators
embryogenesis
implantation.
They
are
also
essential
regulating
adaptive
response
shaping
systemic
However,
function
m6A
modifications
lacks
wide
research.
This
review
highlights
critical
functions
summarizes
reported
research
tumor
microenvironment,
identifies
value
trophoblasts,
interface.
more
likely
embryogenesis,
placentation
shape
Uncovering
these
mechanisms
provide
novel
therapeutic
targets
for
Cancer Biology & Therapy,
Journal Year:
2024,
Volume and Issue:
25(1)
Published: March 26, 2024
N6-methyladenosine
(m6A)
is
the
most
predominant
RNA
epigenetic
regulation
in
eukaryotic
cells.
Numerous
evidence
revealed
that
m6A
modification
exerts
a
crucial
role
of
tumor
microenvironment
(TME)
cell
infiltration
several
tumors.
Nevertheless,
potential
and
mechanism
nasopharyngeal
carcinoma
(NPC)
remains
unknown.
mRNA
expression
data
clinical
information
from
GSE102349,
GSE53819
datasets
obtained
Gene
Expression
Omnibus
(GEO)
was
used
for
differential
gene
subsequent
analysis.
Consensus
clustering
to
identify
m6A-related
molecular
patterns
88
NPC
samples
based
on
prognostic
regulators
using
Univariate
Cox
The
TME
cell-infiltrating
characteristics
each
subclass
were
explored
single-sample
set
enrichment
(ssGSEA)
algorithm
CIBERSORT
algotithm.
DEGs
between
two
subclasses
screened
edgeR
package.
signature
predicated
nomogram
constructed
DEGs.
determined
immunohistochemistry
(IHC)
Chi-square
test
analysis
significance
difference
categorical
variables.
And
survival
performed
Kaplan–Meier
plots
log-rank
tests.
divided
into
subclasses.
analyses
indicated
cluster
1
characterized
by
immune-related
metabolism
pathways
activation,
better
response
anit-PD1
anti-CTLA4
treatment
chemotherapy.
2
stromal
low
HLA
family
immune
checkpoints,
worse
anti-PD1
Furthermore,
we
identified
1558
signatures
predicate
progression-free
(PFS)
patients.
Compared
non-tumor
samples,
REEP2,
TMSB15A,
DSEL,
ID4
upregulated
samples.
High
REEP2
TMSB15A
showed
poor
interaction
ID4,
detected.
Our
finding
plays
an
important
heterogeneity
complexity.
Frontiers in Genetics,
Journal Year:
2022,
Volume and Issue:
12
Published: Jan. 11, 2022
N6-methyladenosine
(m6A)
is
a
dynamic,
reversible
post-transcriptional
modification,
and
the
most
common
internal
modification
of
eukaryotic
messenger
RNA
(mRNA).
Considerable
evidence
now
shows
that
m6A
alters
gene
expression,
thereby
regulating
cell
self-renewal,
differentiation,
invasion,
apoptotic
processes.
M6A
methylation
disorders
are
directly
related
to
abnormal
metabolism,
which
may
lead
tumor
formation.
methyltransferase
dominant
catalyst
during
modification;
it
removes
demethylase,
promotes
recognition
by
binding
proteins,
regulates
mRNA
metabolic
Bladder
cancer
(BC)
urinary
system
malignant
tumor,
with
complex
etiology
high
incidence
rates.
A
well-differentiated
or
moderately
differentiated
pathological
type
at
initial
diagnosis
accounts
for
patients
BC.
For
superficial
bladder
urothelial
carcinoma,
prognosis
normally
good
after
surgery.
However,
due
poor
epithelial
BC
proliferation
infiltration
invasive
metastatic
BC,
lowers
5-years
survival
rate
significantly
affects
clinical
treatments
in
elderly
patients.
Here,
we
review
latest
progress
research
investigate
its
regulation
on
occurrence
development.
Discover Oncology,
Journal Year:
2025,
Volume and Issue:
16(1)
Published: Jan. 4, 2025
Gastric
cancer
(GC),
one
of
the
most
common
and
heterogeneous
malignancies,
is
second
leading
cause
death
worldwide
closely
related
to
dietary
habits.
Fatty
acid
main
nutrients
human
beings,
which
diabetes,
hypertension
other
diseases.
However,
correlation
between
fatty
metabolism
development
progression
GC
remains
largely
unknown.
Here,
we
profiled
genetic
alterations
anabolism-related
genes
(FARGs)
in
gastric
samples
from
TCGA
cohort
GEO
database
evaluate
possible
relationships
their
internal
regulatory
mechanism.
Through
consistent
clustering
functional
enrichment
analysis,
three
distinct
anabolism
clusters
gene
subtypes
were
identified
participate
different
biological
pathways,
correlated
with
characteristics
immune
cell
infiltration
clinical
prognosis.
Importantly,
a
distinctive
FA-score
was
constructed
through
principal
component
analysis
quantify
each
patient.
Further
showed
patients
grouped
high
group
characterized
greater
tumor
mutational
burden
(TMB)
higher
microsatellite
stability
(MSI-H),
may
be
more
aeschynomenous
immunotherapy
had
favorable
Altogether,
our
bioinformatics
based
on
FARGs
uncovered
potential
roles
GC,
provide
newly
prognostic
information
novel
approaches
for
promoting
individualized
GC.
Frontiers in Microbiology,
Journal Year:
2023,
Volume and Issue:
14
Published: Sept. 18, 2023
Background
A
growing
body
of
evidence
has
demonstrated
that
a
high-fat
and
high-protein
diet
(HFHPD)
causes
constipation.
This
study
focuses
on
understanding
how
the
use
Zhishi
Daozhi
decoction
(ZDD)
affects
intricate
balance
intestinal
microorganisms.
The
insights
gained
from
this
investigation
hold
potential
to
offer
practical
clinical
approaches
mitigate
constipation-related
issues
associated
with
HFHPD.
Materials
methods
Mice
were
randomly
divided
into
five
groups:
normal
(MN)
group,
natural
recovery
(MR)
low-dose
ZDD
(MLD)
medium-dose
(MMD)
high-dose
(MHD)
group.
After
constipation
model
was
established
by
HFHPD
combined
loperamide
hydrochloride
(LOP),
different
doses
used
for
intervention.
Subsequently,
contents
cholecystokinin
(CCK)
calcitonin
gene-related
peptide
(CGRP)
in
serum,
superoxide
dismutase
(SOD),
malondialdehyde
(MDA)
liver
determined.
DNA
mucosa
extracted,
16S
rRNA
amplicon
sequencing
analyze
changes
mucosal
microbiota.
Results
treatment,
CCK
content
MR
group
decreased
CGRP
increased,
but
not
significant.
In
addition,
SOD
significantly
lower
than
MLD,
MMD,
MHD
groups,
MDA
higher
MN,
groups.
Constipation
modeling
intervention
changed
structure
induced
HFHPD,
relative
abundance
pathogenic
bacteria
such
as
Aerococcus,
Staphylococcus,
Corynebacterium,
Desulfovibrio,
Clostridium
,
Prevotella
increased.
ZDD,
these
decreased,
Candidatus
Arthromitus
Tropane,
piperidine,
pyridine
alkaloid
biosynthesis
pathways
increased
Conclusion
can
increase
mucosa,
while
effectively
relieve
constipation,
reduce
bacteria,
alleviate
oxidative
stress
injury.
beneficial
which
is
more
conducive
treatment
Frontiers in Immunology,
Journal Year:
2022,
Volume and Issue:
13
Published: Oct. 27, 2022
Due
to
the
molecular
heterogeneity,
most
bladder
cancer
(BLCA)
patients
show
no
pathological
responses
immunotherapy
and
chemotherapy
yet
suffer
from
their
toxicity.
This
study
identified
validated
three
distinct
stable
clusters
of
BLCA
in
cross-platform
databases
based
on
personalized
immune
inflammatory
characteristics.
H&E-stained
histopathology
images
confirmed
infiltration
cells
among
clusters.
Cluster-A
was
characterized
by
a
favorable
prognosis
low
but
showed
highest
abundance
prognosis-related
cell
activity.
Cluster-B
featured
worst
high
infiltration,
numerous
unfavorable
exist.
Cluster-C
had
infiltration.
Based
machine
learning,
highly
precise
predictive
model
(immune
signature,
IIRS),
including
FN1,
IL10,
MYC,
CD247,
TLR2,
developed
identify
IIRS-score
group
that
poor
advanced
clinical
Compared
other
published
models,
IIRS
AUC
5
years
overall
survival
(OS)
value
predicting
1-
3-
year
OS.
Moreover,
an
excellent
performance
chemotherapy's
response.
According
immunohistochemistry
qRT-PCR,
genes
were
differentially
expressed
between
tumor
tissues
with
corresponding
normal
or
adjacent
tissues.
Finally,
immunohistochemical
analyses
performed
13
further
demonstrate
score
is
valid
substitute
for
IIR
patterns
can
contribute
identifying
In
conclusion,
we
established
novel
depicting
pattern
could
independently
predict
OS
acts
as
biomarker
characters
chemotherapy.
Frontiers in Oncology,
Journal Year:
2023,
Volume and Issue:
13
Published: June 7, 2023
In
recent
years,
the
link
between
inflammation
and
bladder
cancer(BC)
has
received
much
attention.
However,
there
were
no
relevant
bibliometric
studies
to
analyze
inflammation-related
research
within
this
field
of
BC.