Classes and phyla of the kingdom Fungi DOI Creative Commons
Nalin N. Wijayawardene, Kevin D. Hyde, Kirill V. Mikhailov

et al.

Fungal Diversity, Journal Year: 2024, Volume and Issue: 128(1), P. 1 - 165

Published: Oct. 15, 2024

Abstract Fungi are one of the most diverse groups organisms with an estimated number species in range 2–3 million. The higher-level ranking fungi has been discussed framework molecular phylogenetics since Hibbett et al., and definition higher ranks (e.g., phyla) ‘true fungi’ have revised several subsequent publications. Rapid accumulation novel genomic data advancements now facilitate a robust precise foundation for classification within kingdom. This study provides updated kingdom , drawing upon comprehensive phylogenomic analysis Holomycota which we outline well-supported nodes fungal tree explore more contentious groupings. We accept 19 phyla Fungi, viz . Aphelidiomycota Ascomycota Basidiobolomycota Basidiomycota Blastocladiomycota Calcarisporiellomycota Chytridiomycota Entomophthoromycota Entorrhizomycota Glomeromycota Kickxellomycota Monoblepharomycota Mortierellomycota Mucoromycota Neocallimastigomycota Olpidiomycota Rozellomycota Sanchytriomycota, Zoopagomycota In phylogenies, Caulochytriomycota resides ; thus, former is regarded as synonym latter, while Caulochytriomycetes viewed class provide description each phylum followed by its classes. A new subphylum, Sanchytriomycotina Karpov introduced only subphylum Sanchytriomycota subclass Pneumocystomycetidae Kirk al. Pneumocystomycetes invalid thus validated. Placements fossil classes also discussed, providing examples.

Language: Английский

Morphological approaches in studying fungi: collection, examination, isolation, sporulation and preservation DOI Creative Commons
Indunil C. Senanayake

Mycosphere, Journal Year: 2020, Volume and Issue: 11(1), P. 2678 - 2754

Published: Jan. 1, 2020

Traditionally, fungal taxonomy was based on observable phenotypic characters.Recent advances have driven taxonomic conclusions towards DNA-based approaches and these techniques corresponding pros cons.Species concepts must therefore rely incorporated of genotypic, physiological characters chemotaxonomy.Examination interpretation morphological however vary from person to person.Standardized procedures are used in the study fungi general practices herein outlined.It is not possible detail all for thus, this paper emphasizes microfungi.Specimen collection initial step any

Language: Английский

Citations

408
The UNITE database for molecular identification and taxonomic communication of fungi and other eukaryotes: sequences, taxa and classifications reconsidered DOI Creative Commons
Kessy Abarenkov, R. Henrik Nilsson, Karl‐Henrik Larsson

et al.

Nucleic Acids Research, Journal Year: 2023, Volume and Issue: 52(D1), P. D791 - D797

Published: Nov. 11, 2023

Abstract UNITE (https://unite.ut.ee) is a web-based database and sequence management environment for molecular identification of eukaryotes. It targets the nuclear ribosomal internal transcribed spacer (ITS) region offers nearly 10 million such sequences reference. These are clustered into ∼2.4M species hypotheses (SHs), each assigned unique digital object identifier (DOI) to promote unambiguous referencing across studies. users have contributed over 600 000 third-party annotations, which shared with range databases other community resources. Recent improvements facilitate detection cross-kingdom biological associations integration undescribed groups organisms everyday pursuits. Serving as twin eukaryotic biodiversity communities worldwide, latest release improved avenues discovery, precise taxonomic communication knowledge platforms.

Language: Английский

Citations

217
Fungal diversity notes 1512–1610: taxonomic and phylogenetic contributions on genera and species of fungal taxa DOI Open Access
Ruvishika S. Jayawardena,

K. D. Hyde,

Song Wang

et al.

Fungal Diversity, Journal Year: 2022, Volume and Issue: 117(1), P. 1 - 272

Published: Nov. 1, 2022

Language: Английский

Citations

96
Pushing the Frontiers of Biodiversity Research: Unveiling the Global Diversity, Distribution, and Conservation of Fungi DOI Open Access
Tuula Niskanen, Robert Lücking, Anders Dahlberg

et al.

Annual Review of Environment and Resources, Journal Year: 2023, Volume and Issue: 48(1), P. 149 - 176

Published: Sept. 18, 2023

Fungi comprise approximately 20% of all eukaryotic species and are connected to virtually life forms on Earth. Yet, their diversity remains contentious, distribution elusive, conservation neglected. We aim flip this situation by synthesizing current knowledge. present a revised estimate 2–3 million fungal with “best estimate” at 2.5 million. To name the unknown >90% these end century, we propose recognition known only from DNA data call for large-scale sampling campaigns. an updated global map richness, highlighting tropical temperate ecoregions high diversity. further Red List assessments enhanced management guidelines aid conservation. Given that fungi play inseparable role in our lives ecosystems, considering fascinating questions remaining be answered, argue constitute next frontier biodiversity research.

Language: Английский

Citations

82
Freshwater fungi from karst landscapes in China and Thailand DOI
Jing Yang, Lingling Liu, E.B. Gareth Jones

et al.

Fungal Diversity, Journal Year: 2023, Volume and Issue: 119(1), P. 1 - 212

Published: March 1, 2023

Language: Английский

Citations

50
Geastrum suae sp. nov. (Geastraceae, Basidiomycota) a new species from Yunnan Province, China DOI Creative Commons

Zheng-Quan Zhang,

LI Chao-hai, Lin Li

et al.

Biodiversity Data Journal, Journal Year: 2023, Volume and Issue: 11

Published: March 15, 2023

Geastrum is the largest genus of Geastraceae and widely distributed all over world. Four specimens which belong to were collected during our scientific expedition Cangshan Mountain, Yunnan, China. Based on morphological characteristics phylogenetic analysis, a new species was introduced. suae characterised by its large basidiomata (height 35–70 mm, diameter 18–37 mm) with long stipe 10–45 mm), smooth pink exoperidium sessile globose endoperidial body. Phylogenetic analysis has been carried out, based internal transcribed spacer (ITS) subunit ribosomal ribonucleic acid (nrLSU) sequence data. The illustration description for taxa are provided.

Language: Английский

Citations

48
Mycosphere notes 387–412 – novel species of fungal taxa from around the world DOI Creative Commons

KD Hyde,

Chada Norphanphoun, Jie Ma

et al.

Mycosphere, Journal Year: 2023, Volume and Issue: 14(1), P. 663 - 744

Published: Jan. 1, 2023

This is the eighth of series Mycosphere notes wherein we provide descriptions and on various fungal genera.In this compilation, introduce Neophaeosphaeriopsis (Phaeosphaeriaceae) as a new genus, 25 species.The species are Acrodictys bambusae (Acrodictyaceae), Acrogenospora guizhouensis (Acrogenosporaceae), Aureobasidium xishuangbannaensis (Saccotheciaceae), Conlarium guizhouense (Conlariaceae), Dactylellina dulongensis (Orbiliaceae), Diaporthe araliae-chinensis (Diaporthaceae), Dibaeis jingdongensis (Icmadophilaceae), Dictyosporella yunnanensis (Annulatascaceae), Distoseptispora phragmiticola (Distoseptisporaceae), Fusarium camelliae (Nectriaceae), Helminthosporium lignicolum, shangrilaense (Massarinaceae), Kirschsteiniothelia puerensis (Kirschsteiniotheliaceae), Melomastia septata (Pleurotremataceae), Montagnula aquilariae (Didymosphaeriaceae), triseptatispora (Phaeosphaeriaceae), Neoroussoella chiangmaiensis (Roussoellaceae), Nigrograna heveae (Nigrogranaceae), Pestalotiopsis ficicrescens (Sporocadaceae), Pleurothecium hainanense (Pleurotheciaceae), Rhodoveronaea hainanensis (Sordariomycetidae), Roussoella chinensis Torula calceiformis (Torulaceae), Trichoglossum ailaoense (Geoglossaceae) Zeloasperisporium spartii (Zeloasperisporiaceae).We sequence data for updated phylogenetic trees 24 genera (Acrodictys, Acrogenospora, Aureobasidium, Conlarium, Dactylellina, Diaporthe, Dibaeis, Dictyosporella, Distoseptispora, Fusarium,

Language: Английский

Citations

45
Fungal diversity notes 1717–1817: taxonomic and phylogenetic contributions on genera and species of fungal taxa DOI
Shi‐Liang Liu, Xuewei Wang, Guojie Li

et al.

Fungal Diversity, Journal Year: 2024, Volume and Issue: 124(1), P. 1 - 216

Published: Feb. 15, 2024

Language: Английский

Citations

40
Current trends, limitations and future research in the fungi? DOI Creative Commons
Kevin D. Hyde, Petr Baldrián, Yanpeng Chen

et al.

Fungal Diversity, Journal Year: 2024, Volume and Issue: 125(1), P. 1 - 71

Published: March 20, 2024

Abstract The field of mycology has grown from an underappreciated subset botany, to a valuable, modern scientific discipline. As this study grown, there have been significant contributions science, technology, and industry, highlighting the value fungi in era. This paper looks at current research, along with existing limitations, suggests future areas where scientists can focus their efforts, mycology. We show how become important emerging diseases medical discuss trends potential drug novel compound discovery. explore phylogenomics, its potential, outcomes address question phylogenomics be applied fungal ecology. In addition, functional genomics studies are discussed importance unravelling intricate mechanisms underlying behaviour, interactions, adaptations, paving way for comprehensive understanding biology. look research building materials, they used as carbon sinks, biocircular economies. numbers always great interest often written about estimates varied greatly. Thus, we needs order obtain more reliable estimates. aspects machine learning (AI) it mycological research. Plant pathogens affecting food production systems on global scale, such, needed area, particularly disease detection. latest data High Throughput Sequencing if still gaining new knowledge same rate before. A review nanotechnology is provided addressed. Arbuscular Mycorrhizal Fungi addressed acknowledged. Fungal databases becoming important, therefore provide major databases. Edible medicinal huge medicines, especially Asia prospects discussed. Lifestyle changes (e.g., endophytes, pathogens, and/or saprobes) also extremely trend special issue Diversity.

Language: Английский

Citations

30
Phylogenomics, divergence times and notes of orders in Basidiomycota DOI
Mao-Qiang He, Bin Cao, Fei Liu

et al.

Fungal Diversity, Journal Year: 2024, Volume and Issue: 126(1), P. 127 - 406

Published: July 9, 2024

Language: Английский

Citations

22