Richness of yeast community associated with apple fruits in Estonia DOI Creative Commons
Arnold Kristjuhan,

Kersti Kristjuhan,

Tiina Tamm

et al.

Heliyon, Journal Year: 2024, Volume and Issue: 10(6), P. e27885 - e27885

Published: March 1, 2024

Yeasts are single-celled fungi that widespread around the globe. They part of a community microorganisms use wide variety habitats, including fruit surfaces. This study aimed to characterise culturable epiphytic yeasts associated with apple fruits. The isolated yeast strains were identified by sequencing 5.8S-ITS region and D1/D2 large subunit ribosomal RNA gene maintained for long-term storage. A total 230 isolates belonging 33 species recovered. Most collected belonged phylum Basidiomycota. Members genera

Language: Английский

Current trends, limitations and future research in the fungi? DOI Creative Commons
Kevin D. Hyde, Petr Baldrián, Yanpeng Chen

et al.

Fungal Diversity, Journal Year: 2024, Volume and Issue: 125(1), P. 1 - 71

Published: March 20, 2024

Abstract The field of mycology has grown from an underappreciated subset botany, to a valuable, modern scientific discipline. As this study grown, there have been significant contributions science, technology, and industry, highlighting the value fungi in era. This paper looks at current research, along with existing limitations, suggests future areas where scientists can focus their efforts, mycology. We show how become important emerging diseases medical discuss trends potential drug novel compound discovery. explore phylogenomics, its potential, outcomes address question phylogenomics be applied fungal ecology. In addition, functional genomics studies are discussed importance unravelling intricate mechanisms underlying behaviour, interactions, adaptations, paving way for comprehensive understanding biology. look research building materials, they used as carbon sinks, biocircular economies. numbers always great interest often written about estimates varied greatly. Thus, we needs order obtain more reliable estimates. aspects machine learning (AI) it mycological research. Plant pathogens affecting food production systems on global scale, such, needed area, particularly disease detection. latest data High Throughput Sequencing if still gaining new knowledge same rate before. A review nanotechnology is provided addressed. Arbuscular Mycorrhizal Fungi addressed acknowledged. Fungal databases becoming important, therefore provide major databases. Edible medicinal huge medicines, especially Asia prospects discussed. Lifestyle changes (e.g., endophytes, pathogens, and/or saprobes) also extremely trend special issue Diversity.

Language: Английский

Citations

28

Phylogenomics, divergence times and notes of orders in Basidiomycota DOI
Mao-Qiang He, Bin Cao, Fei Liu

et al.

Fungal Diversity, Journal Year: 2024, Volume and Issue: 126(1), P. 127 - 406

Published: July 9, 2024

Language: Английский

Citations

20

Yeasts Inhabiting Extreme Environments and Their Biotechnological Applications DOI Creative Commons
Claudia Segal‐Kischinevzky, Lucero Romero‐Aguilar, Luis David Alcaraz

et al.

Microorganisms, Journal Year: 2022, Volume and Issue: 10(4), P. 794 - 794

Published: April 9, 2022

Yeasts are microscopic fungi inhabiting all Earth environments, including those inhospitable for most life forms, considered extreme environments. According to their habitats, yeasts could be extremotolerant or extremophiles. Some polyextremophiles, depending on growth capacity, tolerance, and survival in the face of habitat’s physical chemical constitution. The relevant industrial production value-added compounds, such as biofuels, lipids, carotenoids, recombinant proteins, enzymes, among others. This review calls attention importance metabolic adaptive aspects tolerate conditions cold, heat, water availability, pH, salinity, osmolarity, UV radiation, metal toxicity, which biotechnological applications. We explore habitats yeasts, highlighting key species, physiology, adaptations, molecular identification. Finally, we summarize several findings related industrially-important extremophilic describe current trends applications that will impact bioeconomy.

Language: Английский

Citations

63

Cellulose- and xylan-degrading yeasts: Enzymes, applications and biotechnological potential DOI Creative Commons
Katarína Šuchová, Csaba Fehér, Jonas L. Ravn

et al.

Biotechnology Advances, Journal Year: 2022, Volume and Issue: 59, P. 107981 - 107981

Published: May 14, 2022

Microbes and their carbohydrate-active enzymes are central for depolymerization of complex lignocellulosic polysaccharides in the global carbon cycle. Their unique abilities to degrade ferment carbohydrates also utilized many industrial processes such as baking, brewing production biofuels drugs. Effective degradation utilization cellulose hemicelluloses is important shift towards green bioeconomy, requires microbes equipped with proper sets (CAZymes). Knowledge cellulolytic xylanolytic CAZymes has mainly been generated from bacteria filamentous fungi, while yeasts have largely overlooked may represent an untapped resource natural relevance. Cellulose xylan-degrading ability saccharides promising candidates consolidated bioprocesses (CBPs), they can lignocellulose utilize its constituents produce desired products at same time. Cellulolytic able insoluble crystalline rare rather widespread nature. The lack particular be remediated by introducing missing into strains having outstanding product-forming attributes. In this review, we provide a comprehensive overview cellulose- ascomycetous basidiomycetous known date. We describe how these identified through bioprospecting bioinformatic approaches summarize available growth enzymatic assays strain characterization. Known predicted extensively analyzed, both individual species phylogenetic perspective. strategies used construction recombinant well current applications polysaccharide-degrading yeasts. Finally, discuss great potential cell factories, identify open research questions suggestions future investigations.

Language: Английский

Citations

57

Connecting the multiple dimensions of global soil fungal diversity DOI Creative Commons
Vladimir Mikryukov, Olesya Dulya, Alexander Zizka

et al.

Science Advances, Journal Year: 2023, Volume and Issue: 9(48)

Published: Nov. 29, 2023

How the multiple facets of soil fungal diversity vary worldwide remains virtually unknown, hindering management this essential species-rich group. By sequencing high-resolution DNA markers in over 4000 topsoil samples from natural and human-altered ecosystems across all continents, we illustrate distributions drivers different levels taxonomic phylogenetic fungi their ecological groups. We show impact precipitation temperature interactions on local species richness (alpha diversity) climates. Our findings reveal how drives compositional turnover (beta diversity, linking them with regional (gamma diversity). integrate into principles global biodiversity distribution present detailed maps for conservation modeling processes.

Language: Английский

Citations

32

Recent advances in process modifications of simultaneous saccharification and fermentation (SSF) of lignocellulosic biomass for bioethanol production DOI
Alfred Elikem Kwami Afedzi, Pramuk Parakulsuksatid

Biocatalysis and Agricultural Biotechnology, Journal Year: 2023, Volume and Issue: 54, P. 102961 - 102961

Published: Nov. 1, 2023

Language: Английский

Citations

23

The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics DOI Creative Commons
Ann M. Mc Cartney, Giulio Formenti, Alice Mouton

et al.

npj Biodiversity, Journal Year: 2024, Volume and Issue: 3(1)

Published: Sept. 17, 2024

A genomic database of all Earth's eukaryotic species could contribute to many scientific discoveries; however, only a tiny fraction have information available. In 2018, scientists across the world united under Earth BioGenome Project (EBP), aiming produce high-quality reference genomes containing ~1.5 million recognized species. As European node EBP, Reference Genome Atlas (ERGA) sought implement new decentralised, equitable and inclusive model for producing genomes. For this, ERGA launched Pilot establishing first distributed genome production infrastructure testing it on 98 from 33 countries. Here we outline explore its effectiveness scaling production, whilst considering equity inclusion. The outcomes lessons learned provide solid foundation while offering key learnings other transnational, national resource projects EBP.

Language: Английский

Citations

11

Proposal of one new family, seven new genera and seventy new basidiomycetous yeast species mostly isolated from Tibet and Yunnan provinces, China DOI

Yu-Long Jiang,

Wen-Qing Bao, Fang Liu

et al.

Studies in Mycology, Journal Year: 2024, Volume and Issue: 109(1), P. 57 - 154

Published: June 28, 2024

Language: Английский

Citations

8

Two new arthroconidial yeast species from bark and pit mud in China DOI Creative Commons
Haiyan Zhu,

Yu-Hua Wei,

Liang-Chen Guo

et al.

MycoKeys, Journal Year: 2025, Volume and Issue: 113, P. 57 - 72

Published: Jan. 28, 2025

A study on yeast species from the genera Geotrichum and Magnusiomyces in southwest central China was conducted based morphological molecular phylogenetic analyses using ITS region D1/D2 domain of LSU rRNA gene. The research identified two new species: hubeiense pitmudophilus . contributed to understanding arthroconidial diversity fermentation natural environments paved way for future taxonomic ecological studies. Descriptions, illustrations, analysis results taxa are provided.

Language: Английский

Citations

1

Ecology and functional potential of phyllosphere yeasts DOI
Linda Gouka, Jos M. Raaijmakers, Viviane Cordovez

et al.

Trends in Plant Science, Journal Year: 2022, Volume and Issue: 27(11), P. 1109 - 1123

Published: July 13, 2022

Language: Английский

Citations

30